RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 LCE2AQ5TA79 106 aaPredicted RBP7.48□□□□□ -1.21
HLA-DMA-202ENST00000395303 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.48□□□□□ -1.21
HLA-DMA-202ENST00000395303 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
HLA-DMA-202ENST00000395303 CDIP1Q9H305 208 aa7.48□□□□□ -1.21
HLA-DMA-202ENST00000395303 Q5XG85 94 aa7.47□□□□□ -1.21
HLA-DMA-202ENST00000395303 PPDPFLQ8WWR9 84 aa7.46□□□□□ -1.22
HLA-DMA-202ENST00000395303 MUC17Q685J3 4493 aa7.46□□□□□ -1.22
HLA-DMA-202ENST00000395303 IGLV8-61A0A075B6I0 122 aa7.45□□□□□ -1.22
HLA-DMA-202ENST00000395303 A0A0U1RQV1 116 aa7.45□□□□□ -1.22
HLA-DMA-202ENST00000395303 H0YGX0 51 aa7.45□□□□□ -1.22
HLA-DMA-202ENST00000395303 H7C2G1 150 aa7.45□□□□□ -1.22
HLA-DMA-202ENST00000395303 HSD52Q0P140 79 aa7.45□□□□□ -1.22
HLA-DMA-202ENST00000395303 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
HLA-DMA-202ENST00000395303 HRCT1Q6UXD1 115 aa7.44□□□□□ -1.22
HLA-DMA-202ENST00000395303 UQCR10Q9UDW1 63 aa7.43□□□□□ -1.22
HLA-DMA-202ENST00000395303 A0A0G2JQZ4 141 aa7.42□□□□□ -1.22
HLA-DMA-202ENST00000395303 F8WEM9 126 aa7.42□□□□□ -1.22
HLA-DMA-202ENST00000395303 FAM218AQ96MZ4 157 aa7.42□□□□□ -1.22
HLA-DMA-202ENST00000395303 A0A1B0GX51 115 aa7.41□□□□□ -1.22
HLA-DMA-202ENST00000395303 OCIAD2Q56VL3 154 aa7.41□□□□□ -1.22
HLA-DMA-202ENST00000395303 Q6JHZ5 121 aa7.41□□□□□ -1.22
HLA-DMA-202ENST00000395303 SNCGO76070 127 aa7.4□□□□□ -1.22
HLA-DMA-202ENST00000395303 TRIAP1O43715 76 aa7.38□□□□□ -1.23
HLA-DMA-202ENST00000395303 IGFL1Q6UW32 110 aa7.38□□□□□ -1.23
HLA-DMA-202ENST00000395303 CLEC2BQ92478 149 aa7.38□□□□□ -1.23
HLA-DMA-202ENST00000395303 C1orf195Q5TG92 126 aa7.37□□□□□ -1.23
HLA-DMA-202ENST00000395303 SNHG12Q9BXW3 62 aa7.37□□□□□ -1.23
HLA-DMA-202ENST00000395303 ASB16-AS1Q495Z4 193 aa7.36□□□□□ -1.23
HLA-DMA-202ENST00000395303 XP32Q5T750 250 aa7.36□□□□□ -1.23
HLA-DMA-202ENST00000395303 TRBV7-7A0A0K0K1E9 115 aa7.34□□□□□ -1.23
HLA-DMA-202ENST00000395303 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
HLA-DMA-202ENST00000395303 K7ERJ3 54 aa7.34□□□□□ -1.23
HLA-DMA-202ENST00000395303 TCL1BO95988 128 aa7.34□□□□□ -1.23
HLA-DMA-202ENST00000395303 GHRHP01286 108 aa7.33□□□□□ -1.24
HLA-DMA-202ENST00000395303 SMIM6P0DI80 62 aa7.32□□□□□ -1.24
HLA-DMA-202ENST00000395303 NDUFV3P56181 108 aaKnown RBP7.32□□□□□ -1.24
HLA-DMA-202ENST00000395303 H3BUT2 72 aa7.31□□□□□ -1.24
HLA-DMA-202ENST00000395303 COX6CP09669 75 aa7.31□□□□□ -1.24
HLA-DMA-202ENST00000395303 SEC61BP60468 96 aaKnown RBP7.31□□□□□ -1.24
HLA-DMA-202ENST00000395303 Q6Q795 121 aa7.31□□□□□ -1.24
HLA-DMA-202ENST00000395303 PSMB2P49721 201 aa7.3□□□□□ -1.24
HLA-DMA-202ENST00000395303 H3BQ85 93 aa7.29□□□□□ -1.24
HLA-DMA-202ENST00000395303 ORMDL1Q9P0S3 153 aa7.28□□□□□ -1.24
HLA-DMA-202ENST00000395303 DNAL4O96015 105 aa7.27□□□□□ -1.25
HLA-DMA-202ENST00000395303 TEN1Q86WV5 123 aa7.27□□□□□ -1.25
HLA-DMA-202ENST00000395303 C9orf92A6NGG3 77 aa7.26□□□□□ -1.25
HLA-DMA-202ENST00000395303 H3BMG7 143 aa7.26□□□□□ -1.25
HLA-DMA-202ENST00000395303 FABP2P12104 132 aa7.26□□□□□ -1.25
HLA-DMA-202ENST00000395303 M0R143 59 aa7.25□□□□□ -1.25
HLA-DMA-202ENST00000395303 TRACP01848 142 aa7.25□□□□□ -1.25
HLA-DMA-202ENST00000395303 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
HLA-DMA-202ENST00000395303 LOC105371267A0A1B0GV96 52 aa7.24□□□□□ -1.25
HLA-DMA-202ENST00000395303 TMEM256-PLSCR3K7ERE1 68 aa7.24□□□□□ -1.25
HLA-DMA-202ENST00000395303 LST1O00453 97 aa7.24□□□□□ -1.25
HLA-DMA-202ENST00000395303 SS18L2Q9UHA2 77 aa7.23□□□□□ -1.25
HLA-DMA-202ENST00000395303 A0A1W2PNM2 257 aa7.22□□□□□ -1.25
HLA-DMA-202ENST00000395303 UBE2V1Q13404 147 aa7.22□□□□□ -1.25
HLA-DMA-202ENST00000395303 SCGB1C2P0DMR2 95 aa7.2□□□□□ -1.26
HLA-DMA-202ENST00000395303 A0A087WSZ3 146 aa7.19□□□□□ -1.26
HLA-DMA-202ENST00000395303 TSTD3H0UI37 97 aa7.19□□□□□ -1.26
HLA-DMA-202ENST00000395303 ANKRD29Q8N6D5 301 aa7.19□□□□□ -1.26
HLA-DMA-202ENST00000395303 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
HLA-DMA-202ENST00000395303 PCOTHQ58A44 107 aa7.18□□□□□ -1.26
HLA-DMA-202ENST00000395303 Q96NJ1 140 aa7.18□□□□□ -1.26
HLA-DMA-202ENST00000395303 TRBV7-4A0A0J9YYF1 115 aa7.17□□□□□ -1.26
HLA-DMA-202ENST00000395303 BAALC-AS2P0C853 105 aa7.13□□□□□ -1.27
HLA-DMA-202ENST00000395303 ATXN8Q156A1 80 aa7.13□□□□□ -1.27
HLA-DMA-202ENST00000395303 LCE2DQ5TA82 110 aaPredicted RBP7.13□□□□□ -1.27
HLA-DMA-202ENST00000395303 A0A1B0GV72 72 aa7.12□□□□□ -1.27
HLA-DMA-202ENST00000395303 CCKP06307 115 aa7.12□□□□□ -1.27
HLA-DMA-202ENST00000395303 RBM3P98179 157 aaKnown RBP7.12□□□□□ -1.27
HLA-DMA-202ENST00000395303 NAA38Q9BRA0 125 aaKnown RBP7.12□□□□□ -1.27
HLA-DMA-202ENST00000395303 Q75L30 129 aa7.11□□□□□ -1.27
HLA-DMA-202ENST00000395303 FSIP2Q5CZC0 6907 aa7.1□□□□□ -1.27
HLA-DMA-202ENST00000395303 LYRM7Q5U5X0 104 aa7.1□□□□□ -1.27
HLA-DMA-202ENST00000395303 OBSCN-AS1Q96MR7 158 aa7.1□□□□□ -1.27
HLA-DMA-202ENST00000395303 KRTAP19-2Q3LHN2 52 aa7.08□□□□□ -1.28
HLA-DMA-202ENST00000395303 DSCR8Q96T75 97 aa7.08□□□□□ -1.28
HLA-DMA-202ENST00000395303 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
HLA-DMA-202ENST00000395303 TRBV20-1A0A075B6N2 111 aa7.07□□□□□ -1.28
HLA-DMA-202ENST00000395303 BATFQ16520 125 aa7.06□□□□□ -1.28
HLA-DMA-202ENST00000395303 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
HLA-DMA-202ENST00000395303 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
HLA-DMA-202ENST00000395303 C9orf118A6NHY6 69 aa7.05□□□□□ -1.28
HLA-DMA-202ENST00000395303 C9JAW5 83 aa7.05□□□□□ -1.28
HLA-DMA-202ENST00000395303 JMJD7-PLA2G4BH0Y9G9 81 aa7.05□□□□□ -1.28
HLA-DMA-202ENST00000395303 TAX1BP3O14907 124 aa7.05□□□□□ -1.28
HLA-DMA-202ENST00000395303 IGKV4-1P06312 121 aa7.05□□□□□ -1.28
HLA-DMA-202ENST00000395303 A8MUU9 505 aa7.04□□□□□ -1.28
HLA-DMA-202ENST00000395303 C21orf62-AS1Q17RA5 79 aa7.04□□□□□ -1.28
HLA-DMA-202ENST00000395303 SIGMAR1Q99720 223 aa7.04□□□□□ -1.28
HLA-DMA-202ENST00000395303 CRCT1Q9UGL9 99 aa7.04□□□□□ -1.28
HLA-DMA-202ENST00000395303 Q6ZQT0 140 aa7.03□□□□□ -1.28
HLA-DMA-202ENST00000395303 LOC110117498A0A087WWA1 95 aa7.02□□□□□ -1.29
HLA-DMA-202ENST00000395303 VPS25Q9BRG1 176 aa7.02□□□□□ -1.29
HLA-DMA-202ENST00000395303 A0A1B0GW54 56 aa7.01□□□□□ -1.29
HLA-DMA-202ENST00000395303 DSCR10P59022 87 aa7.01□□□□□ -1.29
HLA-DMA-202ENST00000395303 ATP11AUNQ6ZP68 121 aa7.01□□□□□ -1.29
HLA-DMA-202ENST00000395303 A0A1W2PPM0 123 aa7□□□□□ -1.29
HLA-DMA-202ENST00000395303 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms