RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 IGKV2-24A0A0C4DH68 120 aa2.56□□□□□ -2
HERC4-204ENST00000395198 SPRR4Q96PI1 79 aa2.56□□□□□ -2
HERC4-204ENST00000395198 RPL39LQ96EH5 51 aaKnown RBP2.56□□□□□ -2
HERC4-204ENST00000395198 ANK3Q12955 4377 aaKnown RBP2.56□□□□□ -2
HERC4-204ENST00000395198 LINC00322Q6ZN03 302 aaPredicted RBP2.56□□□□□ -2
HERC4-204ENST00000395198 LINC00208Q96KT6 92 aa2.56□□□□□ -2
HERC4-204ENST00000395198 LORP23490 312 aaPredicted RBP2.55□□□□□ -2
HERC4-204ENST00000395198 C14orf177Q52M58 125 aa2.55□□□□□ -2
HERC4-204ENST00000395198 COX7B2Q8TF08 81 aa2.55□□□□□ -2
HERC4-204ENST00000395198 KALRNO60229 2985 aa2.54□□□□□ -2
HERC4-204ENST00000395198 NDUFA1O15239 70 aa2.54□□□□□ -2
HERC4-204ENST00000395198 DMAC1Q96GE9 116 aa2.54□□□□□ -2
HERC4-204ENST00000395198 LINC00472Q9H8W2 130 aa2.54□□□□□ -2
HERC4-204ENST00000395198 UBR5O95071 2799 aaPredicted RBP2.54□□□□□ -2
HERC4-204ENST00000395198 SLPIP03973 132 aa2.53□□□□□ -2
HERC4-204ENST00000395198 TYMSOSQ8TAI1 123 aa2.53□□□□□ -2
HERC4-204ENST00000395198 RNASE3P12724 160 aaKnown RBP2.53□□□□□ -2
HERC4-204ENST00000395198 RPL39P62891 51 aaKnown RBP2.53□□□□□ -2
HERC4-204ENST00000395198 UBL5Q9BZL1 73 aa2.53□□□□□ -2
HERC4-204ENST00000395198 CELSR1Q9NYQ6 3014 aa2.53□□□□□ -2
HERC4-204ENST00000395198 TRBV6-1A0A0K0K1D8 114 aa2.53□□□□□ -2
HERC4-204ENST00000395198 ETDCA0A1B0GVM5 59 aa2.53□□□□□ -2
HERC4-204ENST00000395198 ANK2Q01484 3957 aa2.53□□□□□ -2
HERC4-204ENST00000395198 FLNCQ14315 2725 aa2.53□□□□□ -2.01
HERC4-204ENST00000395198 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
HERC4-204ENST00000395198 TRRAPQ9Y4A5 3859 aa2.52□□□□□ -2.01
HERC4-204ENST00000395198 A0A1B0GUV1 79 aa2.52□□□□□ -2.01
HERC4-204ENST00000395198 DEFB116Q30KQ4 102 aa2.52□□□□□ -2.01
HERC4-204ENST00000395198 TRBV6-4A0A1B0GX49 114 aa2.52□□□□□ -2.01
HERC4-204ENST00000395198 H0Y9P7 68 aa2.52□□□□□ -2.01
HERC4-204ENST00000395198 MRGPRG-AS1Q2M3A8 158 aa2.52□□□□□ -2.01
HERC4-204ENST00000395198 NCR3O14931 201 aa2.51□□□□□ -2.01
HERC4-204ENST00000395198 FAM168BA1KXE4 195 aa2.51□□□□□ -2.01
HERC4-204ENST00000395198 PDE6GP18545 87 aa2.5□□□□□ -2.01
HERC4-204ENST00000395198 DEFB105AQ8NG35 78 aa2.5□□□□□ -2.01
HERC4-204ENST00000395198 LELP1Q5T871 98 aa2.5□□□□□ -2.01
HERC4-204ENST00000395198 NSD1Q96L73 2696 aaPredicted RBP2.5□□□□□ -2.01
HERC4-204ENST00000395198 PRR9Q5T870 116 aa2.5□□□□□ -2.01
HERC4-204ENST00000395198 IGLV4-69A0A075B6H9 119 aa2.5□□□□□ -2.01
HERC4-204ENST00000395198 NBDYA0A0U1RRE5 68 aa2.5□□□□□ -2.01
HERC4-204ENST00000395198 ITPR2Q14571 2701 aa2.49□□□□□ -2.01
HERC4-204ENST00000395198 IGLV7-43P04211 117 aa2.49□□□□□ -2.01
HERC4-204ENST00000395198 ST20-AS1Q8NBB2 130 aa2.49□□□□□ -2.01
HERC4-204ENST00000395198 TACC2O95359 2948 aa2.49□□□□□ -2.01
HERC4-204ENST00000395198 NBEAQ8NFP9 2946 aa2.49□□□□□ -2.01
HERC4-204ENST00000395198 IGLV4-60A0A075B6I1 120 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 A0A096LNT2 108 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 NDUFB1O75438 58 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 A0A096LNI7 61 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 M0QY20 66 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 CRIP1P50238 77 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 LINC00612Q8N6U2 182 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 Q96NJ1 140 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 A0A087WYN8 130 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 COA5Q86WW8 74 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 KRTAP1-3Q8IUG1 177 aa2.48□□□□□ -2.01
HERC4-204ENST00000395198 STAB2Q8WWQ8 2551 aa2.47□□□□□ -2.01
HERC4-204ENST00000395198 LINC00304Q8N9R0 145 aa2.47□□□□□ -2.01
HERC4-204ENST00000395198 CDKN2A-AS1Q9UH64 79 aa2.47□□□□□ -2.01
HERC4-204ENST00000395198 R4GN34 69 aa2.47□□□□□ -2.01
HERC4-204ENST00000395198 ADGRG4Q8IZF6 3080 aa2.47□□□□□ -2.01
HERC4-204ENST00000395198 COL12A1Q99715 3063 aa2.46□□□□□ -2.01
HERC4-204ENST00000395198 K7EIL1 84 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 KRTAP1-1Q07627 177 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 CMYA5Q8N3K9 4069 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 IGKV4-1P06312 121 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 WFDC10BQ8IUB3 73 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 UQCR11O14957 56 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 GAS8-AS1O95177 125 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 ZZEF1O43149 2961 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 DMBT1Q9UGM3 2413 aaPredicted RBP2.46□□□□□ -2.02
HERC4-204ENST00000395198 DCHS2Q6V1P9 2916 aa2.46□□□□□ -2.02
HERC4-204ENST00000395198 KMT2BQ9UMN6 2715 aaPredicted RBP2.46□□□□□ -2.02
HERC4-204ENST00000395198 SPACA4Q8TDM5 124 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 TENM4Q6N022 2769 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 JMJD7-PLA2G4BH0Y9G9 81 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 KRTAP10-8P60410 259 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 HAMPP81172 84 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 ALMS1Q8TCU4 4167 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 DMXL2Q8TDJ6 3036 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 ATMQ13315 3056 aa2.45□□□□□ -2.02
HERC4-204ENST00000395198 IGKV2-28A0A075B6P5 120 aa2.44□□□□□ -2.02
HERC4-204ENST00000395198 IGKV2D-28P01615 120 aa2.44□□□□□ -2.02
HERC4-204ENST00000395198 UTP20O75691 2785 aaKnown RBP2.44□□□□□ -2.02
HERC4-204ENST00000395198 ITPR1Q14643 2758 aa2.44□□□□□ -2.02
HERC4-204ENST00000395198 TPRXLQ17RH7 258 aa2.44□□□□□ -2.02
HERC4-204ENST00000395198 HIVEP1P15822 2718 aa2.44□□□□□ -2.02
HERC4-204ENST00000395198 LOC110117498A0A087WWA1 95 aa2.43□□□□□ -2.02
HERC4-204ENST00000395198 COX6A2Q02221 97 aa2.43□□□□□ -2.02
HERC4-204ENST00000395198 POLR2KP53803 58 aaKnown RBP2.43□□□□□ -2.02
HERC4-204ENST00000395198 KRTAP21-3Q3LHN1 58 aa2.43□□□□□ -2.02
HERC4-204ENST00000395198 COX7BP24311 80 aa2.43□□□□□ -2.02
HERC4-204ENST00000395198 KRTAP10-3P60369 221 aa2.43□□□□□ -2.02
HERC4-204ENST00000395198 KRTAP10-11P60412 298 aa2.43□□□□□ -2.02
HERC4-204ENST00000395198 H0YGX0 51 aa2.42□□□□□ -2.02
HERC4-204ENST00000395198 LINC00315P59091 139 aa2.42□□□□□ -2.02
HERC4-204ENST00000395198 UNQ6190/PRO20217Q6UXQ8 127 aa2.42□□□□□ -2.02
HERC4-204ENST00000395198 A0A0G2JQZ4 141 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms