RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 SPART-AS1P0CW21 52 aa4.05□□□□□ -1.76
NXF3-201ENST00000395065 PRR4Q16378 134 aa4.05□□□□□ -1.76
NXF3-201ENST00000395065 NKAPP1Q8N9T2 125 aa4.05□□□□□ -1.76
NXF3-201ENST00000395065 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
NXF3-201ENST00000395065 IGLV1-50A0A075B6I6 118 aa4.04□□□□□ -1.76
NXF3-201ENST00000395065 KRTAP29-1A8MX34 341 aaPredicted RBP4.04□□□□□ -1.76
NXF3-201ENST00000395065 C16orf90A8MZG2 172 aa4.04□□□□□ -1.76
NXF3-201ENST00000395065 UBE2AP49459 152 aa4.04□□□□□ -1.76
NXF3-201ENST00000395065 MP68P56378 58 aa4.04□□□□□ -1.76
NXF3-201ENST00000395065 H3BNG1 76 aa4.03□□□□□ -1.76
NXF3-201ENST00000395065 APOC4P55056 127 aa4.03□□□□□ -1.76
NXF3-201ENST00000395065 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
NXF3-201ENST00000395065 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
NXF3-201ENST00000395065 WFDC10BQ8IUB3 73 aa4.03□□□□□ -1.76
NXF3-201ENST00000395065 LINC00208Q96KT6 92 aa4.03□□□□□ -1.76
NXF3-201ENST00000395065 IGKV2D-24A0A075B6R9 120 aa4.02□□□□□ -1.77
NXF3-201ENST00000395065 HTN3P15516 51 aa4.02□□□□□ -1.77
NXF3-201ENST00000395065 ATP11AUNQ6ZP68 121 aa4.02□□□□□ -1.77
NXF3-201ENST00000395065 TGP01266 2768 aa4.02□□□□□ -1.77
NXF3-201ENST00000395065 KRTAP24-1Q3LI83 254 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 Q75L30 129 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
NXF3-201ENST00000395065 C9orf163Q8N9P6 203 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 CHKB-CPT1BH3BT56 60 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 LCA10Q71F78 164 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 MRPL55Q7Z7F7 128 aaKnown RBP4.01□□□□□ -1.77
NXF3-201ENST00000395065 KRTAP7-1Q8IUC3 87 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 LINC00476Q8WZB0 136 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 DNAH3Q8TD57 4116 aa4.01□□□□□ -1.77
NXF3-201ENST00000395065 RPL37AP8A6NKH3 93 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 A6NN06 94 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 NDUFS5O43920 106 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 IGFL1Q6UW32 110 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 RBM12B-AS1Q9P1G2 102 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 H0Y9P7 68 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 LINC01556Q5JQF7 62 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
NXF3-201ENST00000395065 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
NXF3-201ENST00000395065 MGAM2Q2M2H8 2515 aa3.98□□□□□ -1.77
NXF3-201ENST00000395065 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
NXF3-201ENST00000395065 DEFB116Q30KQ4 102 aa3.98□□□□□ -1.77
NXF3-201ENST00000395065 RETNQ9HD89 108 aa3.98□□□□□ -1.77
NXF3-201ENST00000395065 FAM168BA1KXE4 195 aa3.97□□□□□ -1.77
NXF3-201ENST00000395065 PRB2P02812 416 aaPredicted RBP3.97□□□□□ -1.77
NXF3-201ENST00000395065 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
NXF3-201ENST00000395065 PLAC8Q9NZF1 115 aa3.97□□□□□ -1.77
NXF3-201ENST00000395065 DNAH1Q9P2D7 4330 aa3.97□□□□□ -1.77
NXF3-201ENST00000395065 CNBPP62633 177 aaKnown RBP3.97□□□□□ -1.77
NXF3-201ENST00000395065 CASC2Q6XLA1 102 aa3.97□□□□□ -1.77
NXF3-201ENST00000395065 A0A087WSZ3 146 aa3.96□□□□□ -1.78
NXF3-201ENST00000395065 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
NXF3-201ENST00000395065 A0A1W2PNN7 141 aa3.96□□□□□ -1.78
NXF3-201ENST00000395065 RPL37AP61513 92 aaKnown RBP3.96□□□□□ -1.78
NXF3-201ENST00000395065 COA5Q86WW8 74 aa3.96□□□□□ -1.78
NXF3-201ENST00000395065 TENM3Q9P273 2699 aa3.96□□□□□ -1.78
NXF3-201ENST00000395065 REG3GQ6UW15 175 aa3.95□□□□□ -1.78
NXF3-201ENST00000395065 LINC01558Q9Y6Z2 57 aa3.95□□□□□ -1.78
NXF3-201ENST00000395065 A6NED7 52 aa3.95□□□□□ -1.78
NXF3-201ENST00000395065 A8MWP4 228 aa3.95□□□□□ -1.78
NXF3-201ENST00000395065 SPTSSBQ8NFR3 76 aa3.95□□□□□ -1.78
NXF3-201ENST00000395065 LINC00472Q9H8W2 130 aa3.95□□□□□ -1.78
NXF3-201ENST00000395065 LYSTQ99698 3801 aa3.94□□□□□ -1.78
NXF3-201ENST00000395065 KRTAP10-11P60412 298 aa3.94□□□□□ -1.78
NXF3-201ENST00000395065 DNAH10OSP0CZ25 163 aa3.93□□□□□ -1.78
NXF3-201ENST00000395065 HUWE1Q7Z6Z7 4374 aaKnown RBP3.93□□□□□ -1.78
NXF3-201ENST00000395065 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
NXF3-201ENST00000395065 C7orf65Q6ZTY9 151 aa3.93□□□□□ -1.78
NXF3-201ENST00000395065 PRKDCP78527 4128 aaKnown RBP3.92□□□□□ -1.78
NXF3-201ENST00000395065 MMP24-AS1A0A0U1RRL7 71 aa3.92□□□□□ -1.78
NXF3-201ENST00000395065 SPRR1BP22528 89 aa3.92□□□□□ -1.78
NXF3-201ENST00000395065 MOBPQ13875 183 aa3.92□□□□□ -1.78
NXF3-201ENST00000395065 DNAH9Q9NYC9 4486 aa3.92□□□□□ -1.78
NXF3-201ENST00000395065 DNAH10Q8IVF4 4471 aa3.91□□□□□ -1.78
NXF3-201ENST00000395065 Q6ZR54 194 aa3.91□□□□□ -1.78
NXF3-201ENST00000395065 NOTCH1P46531 2555 aa3.91□□□□□ -1.78
NXF3-201ENST00000395065 LORP23490 312 aaPredicted RBP3.9□□□□□ -1.78
NXF3-201ENST00000395065 CASC10Q5T4H9 136 aa3.89□□□□□ -1.79
NXF3-201ENST00000395065 TP53AIP1Q9HCN2 124 aa3.89□□□□□ -1.79
NXF3-201ENST00000395065 H0Y9J4 135 aa3.89□□□□□ -1.79
NXF3-201ENST00000395065 PRLHP81277 87 aa3.89□□□□□ -1.79
NXF3-201ENST00000395065 DEFB131BA0A096LNP1 70 aa3.88□□□□□ -1.79
NXF3-201ENST00000395065 PLA2G1BP04054 148 aaKnown RBP3.88□□□□□ -1.79
NXF3-201ENST00000395065 SPAG11AQ6PDA7 123 aa3.88□□□□□ -1.79
NXF3-201ENST00000395065 SPINK7P58062 85 aa3.87□□□□□ -1.79
NXF3-201ENST00000395065 C11orf45Q8TAV5 145 aa3.87□□□□□ -1.79
NXF3-201ENST00000395065 IGKV2-24A0A0C4DH68 120 aa3.87□□□□□ -1.79
NXF3-201ENST00000395065 HRES1P13985 223 aa3.87□□□□□ -1.79
NXF3-201ENST00000395065 PCOTHQ58A44 107 aa3.86□□□□□ -1.79
NXF3-201ENST00000395065 Q96NJ1 140 aa3.86□□□□□ -1.79
NXF3-201ENST00000395065 KMT2CQ8NEZ4 4911 aaKnown RBP3.86□□□□□ -1.79
NXF3-201ENST00000395065 DNAH7Q8WXX0 4024 aa3.85□□□□□ -1.79
NXF3-201ENST00000395065 A0A096LNI7 61 aa3.85□□□□□ -1.79
NXF3-201ENST00000395065 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
NXF3-201ENST00000395065 COL7A1Q02388 2944 aa3.84□□□□□ -1.79
NXF3-201ENST00000395065 CSMD3Q7Z407 3707 aa3.84□□□□□ -1.79
NXF3-201ENST00000395065 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
NXF3-201ENST00000395065 C8orf17Q9NRJ1 99 aa3.83□□□□□ -1.8
NXF3-201ENST00000395065 TENM2Q9NT68 2774 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms