RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 IGFL1Q6UW32 110 aa9.96□□□□□ -0.81
SMARCD1-202ENST00000394963 Q8NBF4 154 aa9.96□□□□□ -0.82
SMARCD1-202ENST00000394963 PSORS1C2Q9UIG4 136 aa9.94□□□□□ -0.82
SMARCD1-202ENST00000394963 PLA2G2DQ9UNK4 145 aa9.93□□□□□ -0.82
SMARCD1-202ENST00000394963 SMIM29Q86T20 159 aa9.92□□□□□ -0.82
SMARCD1-202ENST00000394963 BCE1O60756 84 aa9.92□□□□□ -0.82
SMARCD1-202ENST00000394963 SMR3BP02814 79 aaPredicted RBP9.92□□□□□ -0.82
SMARCD1-202ENST00000394963 K7EQZ3 153 aa9.91□□□□□ -0.82
SMARCD1-202ENST00000394963 IGKV4-1P06312 121 aa9.9□□□□□ -0.82
SMARCD1-202ENST00000394963 PRKDCP78527 4128 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-202ENST00000394963 NDUFB1O75438 58 aa9.89□□□□□ -0.83
SMARCD1-202ENST00000394963 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
SMARCD1-202ENST00000394963 IGHV6-1A0A0B4J1U7 121 aa9.87□□□□□ -0.83
SMARCD1-202ENST00000394963 IGLV5-37A0A075B6J1 123 aa9.86□□□□□ -0.83
SMARCD1-202ENST00000394963 SPRR1AP35321 89 aa9.86□□□□□ -0.83
SMARCD1-202ENST00000394963 CMYA5Q8N3K9 4069 aa9.86□□□□□ -0.83
SMARCD1-202ENST00000394963 CXCL6P80162 114 aa9.86□□□□□ -0.83
SMARCD1-202ENST00000394963 A0A0U1RQV1 116 aa9.85□□□□□ -0.83
SMARCD1-202ENST00000394963 DNAH10Q8IVF4 4471 aa9.85□□□□□ -0.83
SMARCD1-202ENST00000394963 KRTAP4-16G5E9R7 235 aaPredicted RBP9.85□□□□□ -0.83
SMARCD1-202ENST00000394963 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
SMARCD1-202ENST00000394963 Q6ZRN7 208 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-202ENST00000394963 RETNLBQ9BQ08 111 aa9.84□□□□□ -0.83
SMARCD1-202ENST00000394963 IGLV5-48A0A075B6I7 105 aa9.83□□□□□ -0.84
SMARCD1-202ENST00000394963 DNAH9Q9NYC9 4486 aa9.82□□□□□ -0.84
SMARCD1-202ENST00000394963 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
SMARCD1-202ENST00000394963 SPACA4Q8TDM5 124 aa9.81□□□□□ -0.84
SMARCD1-202ENST00000394963 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
SMARCD1-202ENST00000394963 J3KT08 172 aa9.81□□□□□ -0.84
SMARCD1-202ENST00000394963 DMBT1Q9UGM3 2413 aaPredicted RBP9.8□□□□□ -0.84
SMARCD1-202ENST00000394963 C5orf47Q569G3 176 aa9.79□□□□□ -0.84
SMARCD1-202ENST00000394963 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
SMARCD1-202ENST00000394963 PLECQ15149 4684 aaKnown RBP9.78□□□□□ -0.84
SMARCD1-202ENST00000394963 ZNF706Q9Y5V0 76 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-202ENST00000394963 LINC00208Q96KT6 92 aa9.78□□□□□ -0.84
SMARCD1-202ENST00000394963 C4orf26Q17RF5 130 aa9.77□□□□□ -0.84
SMARCD1-202ENST00000394963 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.85
SMARCD1-202ENST00000394963 CASC2Q6XLA1 102 aa9.77□□□□□ -0.85
SMARCD1-202ENST00000394963 ZNF861PO60384 105 aa9.76□□□□□ -0.85
SMARCD1-202ENST00000394963 HCG22E2RYF7 251 aa9.76□□□□□ -0.85
SMARCD1-202ENST00000394963 CRYGAP11844 174 aa9.76□□□□□ -0.85
SMARCD1-202ENST00000394963 MP68P56378 58 aa9.75□□□□□ -0.85
SMARCD1-202ENST00000394963 FAM236DA0A1B0GTK5 79 aa9.74□□□□□ -0.85
SMARCD1-202ENST00000394963 FAM236CP0DP71 79 aa9.74□□□□□ -0.85
SMARCD1-202ENST00000394963 Q6ZR54 194 aa9.74□□□□□ -0.85
SMARCD1-202ENST00000394963 SPRR4Q96PI1 79 aa9.73□□□□□ -0.85
SMARCD1-202ENST00000394963 DSCR10P59022 87 aa9.71□□□□□ -0.86
SMARCD1-202ENST00000394963 PCOTHQ58A44 107 aa9.71□□□□□ -0.86
SMARCD1-202ENST00000394963 MPLKIPQ8TAP9 179 aa9.7□□□□□ -0.86
SMARCD1-202ENST00000394963 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
SMARCD1-202ENST00000394963 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
SMARCD1-202ENST00000394963 STARD9Q9P2P6 4700 aa9.68□□□□□ -0.86
SMARCD1-202ENST00000394963 BRK1Q8WUW1 75 aa9.68□□□□□ -0.86
SMARCD1-202ENST00000394963 PLA2G1BP04054 148 aaKnown RBP9.66□□□□□ -0.86
SMARCD1-202ENST00000394963 TMEM258P61165 79 aa9.66□□□□□ -0.86
SMARCD1-202ENST00000394963 DNAH7Q8WXX0 4024 aa9.63□□□□□ -0.87
SMARCD1-202ENST00000394963 PLAC8Q9NZF1 115 aa9.62□□□□□ -0.87
SMARCD1-202ENST00000394963 hDV103S1A0JD37 113 aa9.61□□□□□ -0.87
SMARCD1-202ENST00000394963 H0Y9P7 68 aa9.61□□□□□ -0.87
SMARCD1-202ENST00000394963 KMT2AQ03164 3969 aa9.59□□□□□ -0.87
SMARCD1-202ENST00000394963 PRR15Q8IV56 129 aa9.58□□□□□ -0.88
SMARCD1-202ENST00000394963 A8MWP4 228 aa9.57□□□□□ -0.88
SMARCD1-202ENST00000394963 TYMSOSQ8TAI1 123 aa9.56□□□□□ -0.88
SMARCD1-202ENST00000394963 DNAH3Q8TD57 4116 aa9.55□□□□□ -0.88
SMARCD1-202ENST00000394963 H7BZZ5 65 aa9.54□□□□□ -0.88
SMARCD1-202ENST00000394963 C1orf64Q8NEQ6 169 aa9.54□□□□□ -0.88
SMARCD1-202ENST00000394963 OCR1Q9BZK8 76 aa9.53□□□□□ -0.88
SMARCD1-202ENST00000394963 A0A087X002 238 aa9.52□□□□□ -0.89
SMARCD1-202ENST00000394963 A0A1B0GW54 56 aa9.51□□□□□ -0.89
SMARCD1-202ENST00000394963 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
SMARCD1-202ENST00000394963 C8orf17Q9NRJ1 99 aa9.47□□□□□ -0.89
SMARCD1-202ENST00000394963 NDUFC1O43677 76 aa9.46□□□□□ -0.89
SMARCD1-202ENST00000394963 SPRR1BP22528 89 aa9.46□□□□□ -0.89
SMARCD1-202ENST00000394963 LINC00472Q9H8W2 130 aa9.46□□□□□ -0.89
SMARCD1-202ENST00000394963 KLKP1Q107X0 134 aa9.46□□□□□ -0.9
SMARCD1-202ENST00000394963 NOTCH2NLQ7Z3S9 236 aa9.46□□□□□ -0.9
SMARCD1-202ENST00000394963 LINC00336Q6ZUF6 198 aa9.45□□□□□ -0.9
SMARCD1-202ENST00000394963 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
SMARCD1-202ENST00000394963 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
SMARCD1-202ENST00000394963 TRAV22A0A0B4J277 110 aa9.44□□□□□ -0.9
SMARCD1-202ENST00000394963 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
SMARCD1-202ENST00000394963 IGLV8-61A0A075B6I0 122 aa9.43□□□□□ -0.9
SMARCD1-202ENST00000394963 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
SMARCD1-202ENST00000394963 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
SMARCD1-202ENST00000394963 DNAH1Q9P2D7 4330 aa9.41□□□□□ -0.9
SMARCD1-202ENST00000394963 OXTP01178 125 aa9.41□□□□□ -0.9
SMARCD1-202ENST00000394963 LINC00313P59037 77 aa9.4□□□□□ -0.9
SMARCD1-202ENST00000394963 PSPHP1O15172 72 aa9.39□□□□□ -0.91
SMARCD1-202ENST00000394963 MRPL34Q9BQ48 92 aaKnown RBP9.39□□□□□ -0.91
SMARCD1-202ENST00000394963 SERP1Q9Y6X1 66 aa9.38□□□□□ -0.91
SMARCD1-202ENST00000394963 SSBP3-AS1Q7Z2R9 100 aa9.38□□□□□ -0.91
SMARCD1-202ENST00000394963 DNAH11Q96DT5 4516 aa9.38□□□□□ -0.91
SMARCD1-202ENST00000394963 Q96NJ1 140 aa9.37□□□□□ -0.91
SMARCD1-202ENST00000394963 MMP24-AS1A0A0U1RRL7 71 aa9.37□□□□□ -0.91
SMARCD1-202ENST00000394963 LCE6AA0A183 80 aa9.36□□□□□ -0.91
SMARCD1-202ENST00000394963 C1orf195Q5TG92 126 aa9.35□□□□□ -0.91
SMARCD1-202ENST00000394963 V9GYY9 64 aa9.35□□□□□ -0.91
SMARCD1-202ENST00000394963 CHKB-CPT1BH3BT56 60 aa9.33□□□□□ -0.92
SMARCD1-202ENST00000394963 LINC00304Q8N9R0 145 aa9.32□□□□□ -0.92
SMARCD1-202ENST00000394963 SPINK1P00995 79 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms