RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 SPAG11AQ6PDA7 123 aa12.11□□□□□ -0.47
CXXC4-201ENST00000394767 Q8NDZ9 215 aa12.11□□□□□ -0.47
CXXC4-201ENST00000394767 CXCL6P80162 114 aa12.09□□□□□ -0.47
CXXC4-201ENST00000394767 SERP2Q8N6R1 65 aa12.07□□□□□ -0.48
CXXC4-201ENST00000394767 LINC00208Q96KT6 92 aa12.06□□□□□ -0.48
CXXC4-201ENST00000394767 SNURFQ9Y675 71 aa12.06□□□□□ -0.48
CXXC4-201ENST00000394767 FBN1P35555 2871 aaKnown RBP12.05□□□□□ -0.48
CXXC4-201ENST00000394767 UQCRQO14949 82 aa12.05□□□□□ -0.48
CXXC4-201ENST00000394767 LINC00313P59037 77 aa12.05□□□□□ -0.48
CXXC4-201ENST00000394767 C5orf47Q569G3 176 aa12.03□□□□□ -0.48
CXXC4-201ENST00000394767 hDV103S1A0JD37 113 aa12.03□□□□□ -0.48
CXXC4-201ENST00000394767 Q6ZRN7 208 aaPredicted RBP12.01□□□□□ -0.49
CXXC4-201ENST00000394767 PRR26Q8N8Z3 221 aa12.01□□□□□ -0.49
CXXC4-201ENST00000394767 TENM3Q9P273 2699 aa12□□□□□ -0.49
CXXC4-201ENST00000394767 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
CXXC4-201ENST00000394767 SVEP1Q4LDE5 3571 aa11.99□□□□□ -0.49
CXXC4-201ENST00000394767 Q96NJ1 140 aa11.99□□□□□ -0.49
CXXC4-201ENST00000394767 PANO1I0J062 215 aa11.99□□□□□ -0.49
CXXC4-201ENST00000394767 Q6Q795 121 aa11.99□□□□□ -0.49
CXXC4-201ENST00000394767 VWFP04275 2813 aa11.98□□□□□ -0.49
CXXC4-201ENST00000394767 CDIP1Q9H305 208 aa11.97□□□□□ -0.49
CXXC4-201ENST00000394767 TRAV7A0A075B6U4 112 aa11.97□□□□□ -0.49
CXXC4-201ENST00000394767 IGKV2D-30A0A075B6S6 120 aa11.97□□□□□ -0.49
CXXC4-201ENST00000394767 IGKV2-30P06310 120 aa11.97□□□□□ -0.49
CXXC4-201ENST00000394767 SMIM29Q86T20 159 aa11.96□□□□□ -0.49
CXXC4-201ENST00000394767 FAM236DA0A1B0GTK5 79 aa11.95□□□□□ -0.5
CXXC4-201ENST00000394767 FAM236CP0DP71 79 aa11.95□□□□□ -0.5
CXXC4-201ENST00000394767 H0Y9P7 68 aa11.95□□□□□ -0.5
CXXC4-201ENST00000394767 SPRR1AP35321 89 aa11.95□□□□□ -0.5
CXXC4-201ENST00000394767 Q5VSD8 79 aa11.95□□□□□ -0.5
CXXC4-201ENST00000394767 TMEM258P61165 79 aa11.93□□□□□ -0.5
CXXC4-201ENST00000394767 SPINK1P00995 79 aa11.93□□□□□ -0.5
CXXC4-201ENST00000394767 PCOTHQ58A44 107 aa11.92□□□□□ -0.5
CXXC4-201ENST00000394767 COX7CP15954 63 aa11.92□□□□□ -0.5
CXXC4-201ENST00000394767 A8MWP4 228 aa11.92□□□□□ -0.5
CXXC4-201ENST00000394767 IGLV5-48A0A075B6I7 105 aa11.91□□□□□ -0.5
CXXC4-201ENST00000394767 A0A1W2PNM2 257 aa11.91□□□□□ -0.5
CXXC4-201ENST00000394767 C9orf92A6NGG3 77 aa11.9□□□□□ -0.5
CXXC4-201ENST00000394767 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
CXXC4-201ENST00000394767 K7EQZ3 153 aa11.88□□□□□ -0.51
CXXC4-201ENST00000394767 SEC61GP60059 68 aa11.88□□□□□ -0.51
CXXC4-201ENST00000394767 ATP11AUNQ6ZP68 121 aa11.88□□□□□ -0.51
CXXC4-201ENST00000394767 TENM2Q9NT68 2774 aa11.88□□□□□ -0.51
CXXC4-201ENST00000394767 C8orf87E5RJ46 101 aa11.87□□□□□ -0.51
CXXC4-201ENST00000394767 PKD1L1Q8TDX9 2849 aa11.87□□□□□ -0.51
CXXC4-201ENST00000394767 NDUFC1O43677 76 aa11.86□□□□□ -0.51
CXXC4-201ENST00000394767 DSCR10P59022 87 aa11.86□□□□□ -0.51
CXXC4-201ENST00000394767 FAM229BQ4G0N7 80 aa11.86□□□□□ -0.51
CXXC4-201ENST00000394767 OBSCN-AS1Q96MR7 158 aa11.86□□□□□ -0.51
CXXC4-201ENST00000394767 TP53AIP1Q9HCN2 124 aa11.86□□□□□ -0.51
CXXC4-201ENST00000394767 C1orf64Q8NEQ6 169 aa11.82□□□□□ -0.52
CXXC4-201ENST00000394767 PRR15Q8IV56 129 aa11.79□□□□□ -0.52
CXXC4-201ENST00000394767 MRPL34Q9BQ48 92 aaKnown RBP11.79□□□□□ -0.52
CXXC4-201ENST00000394767 A0A1B0GVX0 72 aa11.79□□□□□ -0.52
CXXC4-201ENST00000394767 DMBT1Q9UGM3 2413 aaPredicted RBP11.79□□□□□ -0.52
CXXC4-201ENST00000394767 TMEM254Q8TBM7 123 aa11.79□□□□□ -0.52
CXXC4-201ENST00000394767 CCDC179H3BU77 68 aa11.78□□□□□ -0.52
CXXC4-201ENST00000394767 C8orf17Q9NRJ1 99 aa11.78□□□□□ -0.52
CXXC4-201ENST00000394767 CD164Q04900 197 aa11.76□□□□□ -0.53
CXXC4-201ENST00000394767 SVIPQ8NHG7 77 aa11.75□□□□□ -0.53
CXXC4-201ENST00000394767 TRAV22A0A0B4J277 110 aa11.72□□□□□ -0.53
CXXC4-201ENST00000394767 TGP01266 2768 aa11.72□□□□□ -0.53
CXXC4-201ENST00000394767 SPRR1BP22528 89 aa11.7□□□□□ -0.54
CXXC4-201ENST00000394767 IGLV7-46A0A075B6I9 117 aa11.7□□□□□ -0.54
CXXC4-201ENST00000394767 SPTSSBQ8NFR3 76 aa11.67□□□□□ -0.54
CXXC4-201ENST00000394767 FLG2Q5D862 2391 aaPredicted RBP11.66□□□□□ -0.54
CXXC4-201ENST00000394767 ATP5EP56381 51 aaPredicted RBP11.66□□□□□ -0.54
CXXC4-201ENST00000394767 KRTAP4-16G5E9R7 235 aaPredicted RBP11.65□□□□□ -0.55
CXXC4-201ENST00000394767 KRTAP11-1Q8IUC1 163 aa11.64□□□□□ -0.55
CXXC4-201ENST00000394767 C7orf65Q6ZTY9 151 aa11.63□□□□□ -0.55
CXXC4-201ENST00000394767 KRTAP7-1Q8IUC3 87 aa11.62□□□□□ -0.55
CXXC4-201ENST00000394767 SERP1Q9Y6X1 66 aa11.61□□□□□ -0.55
CXXC4-201ENST00000394767 MPLKIPQ8TAP9 179 aa11.6□□□□□ -0.55
CXXC4-201ENST00000394767 COX6B2Q6YFQ2 88 aa11.6□□□□□ -0.55
CXXC4-201ENST00000394767 TRRAPQ9Y4A5 3859 aa11.59□□□□□ -0.55
CXXC4-201ENST00000394767 CUBNO60494 3623 aa11.56□□□□□ -0.56
CXXC4-201ENST00000394767 IGLV8-61A0A075B6I0 122 aa11.55□□□□□ -0.56
CXXC4-201ENST00000394767 LOC101927531A0A1B0GV80 90 aa11.55□□□□□ -0.56
CXXC4-201ENST00000394767 H3BPC8 53 aa11.55□□□□□ -0.56
CXXC4-201ENST00000394767 LINC01600Q96MT4 127 aa11.54□□□□□ -0.56
CXXC4-201ENST00000394767 LINC00483Q53H64 154 aa11.53□□□□□ -0.56
CXXC4-201ENST00000394767 A0A087X002 238 aa11.53□□□□□ -0.56
CXXC4-201ENST00000394767 BRK1Q8WUW1 75 aa11.53□□□□□ -0.56
CXXC4-201ENST00000394767 PRR15LQ9BU68 103 aa11.51□□□□□ -0.57
CXXC4-201ENST00000394767 A0A0U1RQV1 116 aa11.48□□□□□ -0.57
CXXC4-201ENST00000394767 ACYP2P14621 99 aa11.44□□□□□ -0.58
CXXC4-201ENST00000394767 Q6ZSA8 131 aa11.42□□□□□ -0.58
CXXC4-201ENST00000394767 V9GYY9 64 aa11.42□□□□□ -0.58
CXXC4-201ENST00000394767 Q8N1X5 172 aa11.41□□□□□ -0.58
CXXC4-201ENST00000394767 C1orf195Q5TG92 126 aa11.4□□□□□ -0.58
CXXC4-201ENST00000394767 ZNF469Q96JG9 3925 aaPredicted RBP11.39□□□□□ -0.59
CXXC4-201ENST00000394767 LINC00472Q9H8W2 130 aa11.38□□□□□ -0.59
CXXC4-201ENST00000394767 VPS13CQ709C8 3753 aa11.38□□□□□ -0.59
CXXC4-201ENST00000394767 RBM12B-AS1Q9P1G2 102 aa11.36□□□□□ -0.59
CXXC4-201ENST00000394767 KRTAP13-1Q8IUC0 172 aa11.35□□□□□ -0.59
CXXC4-201ENST00000394767 FBN3Q75N90 2809 aa11.33□□□□□ -0.59
CXXC4-201ENST00000394767 K7ERS5 55 aa11.31□□□□□ -0.6
CXXC4-201ENST00000394767 MMP24-AS1A0A0U1RRL7 71 aa11.29□□□□□ -0.6
CXXC4-201ENST00000394767 SMIM26A0A096LP01 95 aa11.28□□□□□ -0.6
CXXC4-201ENST00000394767 OXTP01178 125 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms