RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 COL6A5A8TX70 2615 aa8.18□□□□□ -1.1
LCA5-202ENST00000392959 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.17□□□□□ -1.1
LCA5-202ENST00000392959 HRES1P13985 223 aa8.17□□□□□ -1.1
LCA5-202ENST00000392959 MMP24-AS1A0A0U1RRL7 71 aa8.16□□□□□ -1.1
LCA5-202ENST00000392959 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
LCA5-202ENST00000392959 Q8N9P0 234 aaPredicted RBP8.16□□□□□ -1.1
LCA5-202ENST00000392959 Q75L30 129 aa8.16□□□□□ -1.1
LCA5-202ENST00000392959 WDFY3Q8IZQ1 3526 aa8.16□□□□□ -1.1
LCA5-202ENST00000392959 LAMA2P24043 3122 aaKnown RBP8.15□□□□□ -1.1
LCA5-202ENST00000392959 ZNF292O60281 2723 aa8.15□□□□□ -1.11
LCA5-202ENST00000392959 FAM229BQ4G0N7 80 aa8.14□□□□□ -1.11
LCA5-202ENST00000392959 RBM12B-AS1Q9P1G2 102 aa8.14□□□□□ -1.11
LCA5-202ENST00000392959 TNP2Q05952 138 aa8.14□□□□□ -1.11
LCA5-202ENST00000392959 LINC01554Q52M75 96 aa8.13□□□□□ -1.11
LCA5-202ENST00000392959 LINC01558Q9Y6Z2 57 aa8.12□□□□□ -1.11
LCA5-202ENST00000392959 WDFY4Q6ZS81 3184 aa8.1□□□□□ -1.11
LCA5-202ENST00000392959 HTTP42858 3142 aa8.1□□□□□ -1.11
LCA5-202ENST00000392959 SPTBN5Q9NRC6 3674 aaKnown RBP8.09□□□□□ -1.11
LCA5-202ENST00000392959 A0A1B0GU33 70 aa8.09□□□□□ -1.11
LCA5-202ENST00000392959 VCANP13611 3396 aa8.08□□□□□ -1.12
LCA5-202ENST00000392959 NBEAL2Q6ZNJ1 2754 aa8.08□□□□□ -1.12
LCA5-202ENST00000392959 LINC00472Q9H8W2 130 aa8.08□□□□□ -1.12
LCA5-202ENST00000392959 SPRR1BP22528 89 aa8.08□□□□□ -1.12
LCA5-202ENST00000392959 UBR5O95071 2799 aaPredicted RBP8.06□□□□□ -1.12
LCA5-202ENST00000392959 TRANK1O15050 2925 aa8.05□□□□□ -1.12
LCA5-202ENST00000392959 DMBT1Q9UGM3 2413 aaPredicted RBP8.04□□□□□ -1.12
LCA5-202ENST00000392959 XIRP2A4UGR9 3374 aa8.04□□□□□ -1.12
LCA5-202ENST00000392959 PLAC8Q9NZF1 115 aa8.04□□□□□ -1.12
LCA5-202ENST00000392959 UNC80Q8N2C7 3258 aa8.04□□□□□ -1.12
LCA5-202ENST00000392959 Q5VV11 94 aa8.03□□□□□ -1.12
LCA5-202ENST00000392959 STAB2Q8WWQ8 2551 aa8.02□□□□□ -1.13
LCA5-202ENST00000392959 SZT2Q5T011 3432 aa8.02□□□□□ -1.13
LCA5-202ENST00000392959 MYO15AQ9UKN7 3530 aa8.01□□□□□ -1.13
LCA5-202ENST00000392959 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
LCA5-202ENST00000392959 DNAH14Q0VDD8 3507 aa8□□□□□ -1.13
LCA5-202ENST00000392959 OXTP01178 125 aa8□□□□□ -1.13
LCA5-202ENST00000392959 KRTAP26-1Q6PEX3 210 aa8□□□□□ -1.13
LCA5-202ENST00000392959 REV3LO60673 3130 aa7.99□□□□□ -1.13
LCA5-202ENST00000392959 DSPP15924 2871 aaKnown RBP7.99□□□□□ -1.13
LCA5-202ENST00000392959 Q5W150 140 aa7.99□□□□□ -1.13
LCA5-202ENST00000392959 Q6ZSA8 131 aa7.97□□□□□ -1.13
LCA5-202ENST00000392959 PRAC1Q96KF2 57 aa7.97□□□□□ -1.13
LCA5-202ENST00000392959 LUZP6Q538Z0 58 aa7.96□□□□□ -1.13
LCA5-202ENST00000392959 SPINK7P58062 85 aa7.96□□□□□ -1.14
LCA5-202ENST00000392959 MKI67P46013 3256 aaKnown RBP7.96□□□□□ -1.14
LCA5-202ENST00000392959 TRIOO75962 3097 aa7.96□□□□□ -1.14
LCA5-202ENST00000392959 KRTAP1-5Q9BYS1 174 aa7.95□□□□□ -1.14
LCA5-202ENST00000392959 BAHCC1Q9P281 2608 aa7.95□□□□□ -1.14
LCA5-202ENST00000392959 NSD1Q96L73 2696 aaPredicted RBP7.94□□□□□ -1.14
LCA5-202ENST00000392959 FRYQ5TBA9 3013 aa7.94□□□□□ -1.14
LCA5-202ENST00000392959 VPS13AQ96RL7 3174 aa7.92□□□□□ -1.14
LCA5-202ENST00000392959 CDH23Q9H251 3354 aa7.91□□□□□ -1.14
LCA5-202ENST00000392959 DMAC1Q96GE9 116 aa7.91□□□□□ -1.14
LCA5-202ENST00000392959 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
LCA5-202ENST00000392959 FREM2Q5SZK8 3169 aa7.89□□□□□ -1.15
LCA5-202ENST00000392959 PRUNE2Q8WUY3 3088 aa7.88□□□□□ -1.15
LCA5-202ENST00000392959 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
LCA5-202ENST00000392959 CSAG1Q6PB30 78 aa7.87□□□□□ -1.15
LCA5-202ENST00000392959 IGSF10Q6WRI0 2623 aa7.86□□□□□ -1.15
LCA5-202ENST00000392959 SPENQ96T58 3664 aaKnown RBP7.83□□□□□ -1.16
LCA5-202ENST00000392959 KRTAP29-1A8MX34 341 aaPredicted RBP7.83□□□□□ -1.16
LCA5-202ENST00000392959 S4R3F8 94 aa7.81□□□□□ -1.16
LCA5-202ENST00000392959 Q6ZR54 194 aa7.81□□□□□ -1.16
LCA5-202ENST00000392959 EYSQ5T1H1 3165 aa7.8□□□□□ -1.16
LCA5-202ENST00000392959 LINC00483Q53H64 154 aa7.8□□□□□ -1.16
LCA5-202ENST00000392959 ITPR1Q14643 2758 aa7.79□□□□□ -1.16
LCA5-202ENST00000392959 KALRNO60229 2985 aa7.76□□□□□ -1.17
LCA5-202ENST00000392959 TACC2O95359 2948 aa7.76□□□□□ -1.17
LCA5-202ENST00000392959 DMDP11532 3685 aa7.76□□□□□ -1.17
LCA5-202ENST00000392959 PANO1I0J062 215 aa7.75□□□□□ -1.17
LCA5-202ENST00000392959 RPL37P61927 97 aaKnown RBP7.75□□□□□ -1.17
LCA5-202ENST00000392959 DMXL2Q8TDJ6 3036 aa7.75□□□□□ -1.17
LCA5-202ENST00000392959 H3BS24 57 aa7.74□□□□□ -1.17
LCA5-202ENST00000392959 SPEGQ15772 3267 aa7.74□□□□□ -1.17
LCA5-202ENST00000392959 FLNCQ14315 2725 aa7.73□□□□□ -1.17
LCA5-202ENST00000392959 NBEAQ8NFP9 2946 aa7.73□□□□□ -1.17
LCA5-202ENST00000392959 R4GN34 69 aa7.73□□□□□ -1.17
LCA5-202ENST00000392959 KRTAP10-1P60331 282 aa7.73□□□□□ -1.17
LCA5-202ENST00000392959 ITPR2Q14571 2701 aa7.72□□□□□ -1.17
LCA5-202ENST00000392959 KRTAP10-2P60368 255 aa7.71□□□□□ -1.17
LCA5-202ENST00000392959 ASH1LQ9NR48 2969 aaKnown RBP7.7□□□□□ -1.18
LCA5-202ENST00000392959 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
LCA5-202ENST00000392959 ROMO1P60602 79 aa7.68□□□□□ -1.18
LCA5-202ENST00000392959 M0R2T5 61 aa7.67□□□□□ -1.18
LCA5-202ENST00000392959 A0A087X002 238 aa7.66□□□□□ -1.18
LCA5-202ENST00000392959 NOTCH2NLQ7Z3S9 236 aa7.66□□□□□ -1.18
LCA5-202ENST00000392959 ASB16-AS1Q495Z4 193 aa7.65□□□□□ -1.19
LCA5-202ENST00000392959 CELSR3Q9NYQ7 3312 aa7.64□□□□□ -1.19
LCA5-202ENST00000392959 ATMQ13315 3056 aa7.64□□□□□ -1.19
LCA5-202ENST00000392959 UTP20O75691 2785 aaKnown RBP7.63□□□□□ -1.19
LCA5-202ENST00000392959 APCP25054 2843 aa7.62□□□□□ -1.19
LCA5-202ENST00000392959 SEC61BP60468 96 aaKnown RBP7.61□□□□□ -1.19
LCA5-202ENST00000392959 LCE6AA0A183 80 aa7.61□□□□□ -1.19
LCA5-202ENST00000392959 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
LCA5-202ENST00000392959 HIVEP1P15822 2718 aa7.61□□□□□ -1.19
LCA5-202ENST00000392959 A0A0A0MQY5 61 aa7.6□□□□□ -1.19
LCA5-202ENST00000392959 KRTAP11-1Q8IUC1 163 aa7.6□□□□□ -1.19
LCA5-202ENST00000392959 Q5VSD8 79 aa7.59□□□□□ -1.19
LCA5-202ENST00000392959 COL12A1Q99715 3063 aa7.59□□□□□ -1.19
LCA5-202ENST00000392959 ADGRG4Q8IZF6 3080 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms