RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 PCLOQ9Y6V0 5065 aa7.46□□□□□ -1.21
TRAF3IP2-208ENST00000392556 LINC00959A0A1B0GUT2 108 aa7.46□□□□□ -1.22
TRAF3IP2-208ENST00000392556 PKHD1P08F94 4074 aa7.46□□□□□ -1.22
TRAF3IP2-208ENST00000392556 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
TRAF3IP2-208ENST00000392556 ELOF1P60002 83 aaKnown RBP7.45□□□□□ -1.22
TRAF3IP2-208ENST00000392556 PKD1P98161 4303 aa7.45□□□□□ -1.22
TRAF3IP2-208ENST00000392556 FAM30AQ9NZY2 134 aa7.44□□□□□ -1.22
TRAF3IP2-208ENST00000392556 IGKV3OR2-268A0A0C4DH90 116 aa7.44□□□□□ -1.22
TRAF3IP2-208ENST00000392556 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
TRAF3IP2-208ENST00000392556 NDUFB1O75438 58 aa7.44□□□□□ -1.22
TRAF3IP2-208ENST00000392556 Q8N1X5 172 aa7.44□□□□□ -1.22
TRAF3IP2-208ENST00000392556 A0A096LPF7 62 aa7.43□□□□□ -1.22
TRAF3IP2-208ENST00000392556 TRGV1A0A0A0MS02 117 aa7.43□□□□□ -1.22
TRAF3IP2-208ENST00000392556 HCG22E2RYF7 251 aa7.43□□□□□ -1.22
TRAF3IP2-208ENST00000392556 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
TRAF3IP2-208ENST00000392556 DIRC1Q969H9 104 aa7.43□□□□□ -1.22
TRAF3IP2-208ENST00000392556 PRO0255Q9UI72 69 aa7.43□□□□□ -1.22
TRAF3IP2-208ENST00000392556 SMIM29Q86T20 159 aa7.43□□□□□ -1.22
TRAF3IP2-208ENST00000392556 C8orf87E5RJ46 101 aa7.42□□□□□ -1.22
TRAF3IP2-208ENST00000392556 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
TRAF3IP2-208ENST00000392556 Q8NDZ9 215 aa7.42□□□□□ -1.22
TRAF3IP2-208ENST00000392556 ETDCA0A1B0GVM5 59 aa7.42□□□□□ -1.22
TRAF3IP2-208ENST00000392556 KIAA0087Q14695 138 aa7.42□□□□□ -1.22
TRAF3IP2-208ENST00000392556 LCA10Q71F78 164 aa7.42□□□□□ -1.22
TRAF3IP2-208ENST00000392556 Q75L30 129 aa7.42□□□□□ -1.22
TRAF3IP2-208ENST00000392556 KRTAP1-5Q9BYS1 174 aa7.42□□□□□ -1.22
TRAF3IP2-208ENST00000392556 RYR1P21817 5038 aa7.41□□□□□ -1.22
TRAF3IP2-208ENST00000392556 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.4□□□□□ -1.22
TRAF3IP2-208ENST00000392556 A0A1B0GW54 56 aa7.4□□□□□ -1.22
TRAF3IP2-208ENST00000392556 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.23
TRAF3IP2-208ENST00000392556 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
TRAF3IP2-208ENST00000392556 HIGD2BQ4VC39 106 aa7.39□□□□□ -1.23
TRAF3IP2-208ENST00000392556 Q9BRP9 147 aa7.39□□□□□ -1.23
TRAF3IP2-208ENST00000392556 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
TRAF3IP2-208ENST00000392556 LOC101927531A0A1B0GV80 90 aa7.38□□□□□ -1.23
TRAF3IP2-208ENST00000392556 C10orf25Q5T742 122 aa7.38□□□□□ -1.23
TRAF3IP2-208ENST00000392556 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
TRAF3IP2-208ENST00000392556 CDC42SE1Q9NRR8 79 aa7.37□□□□□ -1.23
TRAF3IP2-208ENST00000392556 VPREB1P12018 145 aa7.36□□□□□ -1.23
TRAF3IP2-208ENST00000392556 KRTAP10-2P60368 255 aa7.36□□□□□ -1.23
TRAF3IP2-208ENST00000392556 SPANXA2-OT1Q8N9U9 137 aa7.36□□□□□ -1.23
TRAF3IP2-208ENST00000392556 PRR15LQ9BU68 103 aa7.36□□□□□ -1.23
TRAF3IP2-208ENST00000392556 LOC100131303A0A0U1RQF7 123 aa7.35□□□□□ -1.23
TRAF3IP2-208ENST00000392556 A0A1B0GUV1 79 aa7.35□□□□□ -1.23
TRAF3IP2-208ENST00000392556 HSPG2P98160 4391 aa7.35□□□□□ -1.23
TRAF3IP2-208ENST00000392556 DNAH10OSP0CZ25 163 aa7.35□□□□□ -1.23
TRAF3IP2-208ENST00000392556 KLK12Q9UKR0 248 aa7.35□□□□□ -1.23
TRAF3IP2-208ENST00000392556 LRP1BQ9NZR2 4599 aa7.34□□□□□ -1.24
TRAF3IP2-208ENST00000392556 A0A087WTM6 91 aa7.33□□□□□ -1.24
TRAF3IP2-208ENST00000392556 LINC00208Q96KT6 92 aa7.33□□□□□ -1.24
TRAF3IP2-208ENST00000392556 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
TRAF3IP2-208ENST00000392556 H3BS24 57 aa7.32□□□□□ -1.24
TRAF3IP2-208ENST00000392556 GYPEP15421 78 aa7.32□□□□□ -1.24
TRAF3IP2-208ENST00000392556 PRR4Q16378 134 aa7.32□□□□□ -1.24
TRAF3IP2-208ENST00000392556 C9orf116Q5BN46 136 aaPredicted RBP7.32□□□□□ -1.24
TRAF3IP2-208ENST00000392556 A6NED7 52 aa7.32□□□□□ -1.24
TRAF3IP2-208ENST00000392556 ST20-AS1Q8NBB2 130 aa7.32□□□□□ -1.24
TRAF3IP2-208ENST00000392556 KCNQ1DNQ9H478 68 aa7.31□□□□□ -1.24
TRAF3IP2-208ENST00000392556 LINC01556Q5JQF7 62 aa7.3□□□□□ -1.24
TRAF3IP2-208ENST00000392556 MOBPQ13875 183 aa7.29□□□□□ -1.24
TRAF3IP2-208ENST00000392556 WFDC10BQ8IUB3 73 aa7.29□□□□□ -1.24
TRAF3IP2-208ENST00000392556 NKAPP1Q8N9T2 125 aa7.29□□□□□ -1.24
TRAF3IP2-208ENST00000392556 IGLV5-48A0A075B6I7 105 aa7.28□□□□□ -1.24
TRAF3IP2-208ENST00000392556 H3BPC8 53 aa7.28□□□□□ -1.24
TRAF3IP2-208ENST00000392556 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
TRAF3IP2-208ENST00000392556 MP68P56378 58 aa7.27□□□□□ -1.24
TRAF3IP2-208ENST00000392556 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.24
TRAF3IP2-208ENST00000392556 APOBP04114 4563 aaKnown RBP7.27□□□□□ -1.25
TRAF3IP2-208ENST00000392556 DSCR10P59022 87 aa7.26□□□□□ -1.25
TRAF3IP2-208ENST00000392556 LELP1Q5T871 98 aa7.26□□□□□ -1.25
TRAF3IP2-208ENST00000392556 GVQW2A0A096LPI5 108 aaPredicted RBP7.26□□□□□ -1.25
TRAF3IP2-208ENST00000392556 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
TRAF3IP2-208ENST00000392556 KRTAP10-1P60331 282 aa7.25□□□□□ -1.25
TRAF3IP2-208ENST00000392556 CHCHD10Q8WYQ3 142 aaPredicted RBP7.25□□□□□ -1.25
TRAF3IP2-208ENST00000392556 Q5VSD8 79 aa7.25□□□□□ -1.25
TRAF3IP2-208ENST00000392556 IGLV5-52A0A0A0MRZ9 124 aa7.24□□□□□ -1.25
TRAF3IP2-208ENST00000392556 SERTAD4-AS1Q5TG53 156 aa7.24□□□□□ -1.25
TRAF3IP2-208ENST00000392556 UNQ6190/PRO20217Q6UXQ8 127 aa7.24□□□□□ -1.25
TRAF3IP2-208ENST00000392556 PLAC8Q9NZF1 115 aa7.23□□□□□ -1.25
TRAF3IP2-208ENST00000392556 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
TRAF3IP2-208ENST00000392556 A0A1W2PNM2 257 aa7.22□□□□□ -1.25
TRAF3IP2-208ENST00000392556 K7EQZ3 153 aa7.21□□□□□ -1.26
TRAF3IP2-208ENST00000392556 SPAG11BQ08648 103 aa7.21□□□□□ -1.26
TRAF3IP2-208ENST00000392556 CLPSL2Q6UWE3 100 aa7.21□□□□□ -1.26
TRAF3IP2-208ENST00000392556 SPRR4Q96PI1 79 aa7.21□□□□□ -1.26
TRAF3IP2-208ENST00000392556 Q8NBF4 154 aa7.19□□□□□ -1.26
TRAF3IP2-208ENST00000392556 Q8N377 158 aa7.19□□□□□ -1.26
TRAF3IP2-208ENST00000392556 C9orf163Q8N9P6 203 aa7.19□□□□□ -1.26
TRAF3IP2-208ENST00000392556 ASB16-AS1Q495Z4 193 aa7.18□□□□□ -1.26
TRAF3IP2-208ENST00000392556 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
TRAF3IP2-208ENST00000392556 COA5Q86WW8 74 aa7.18□□□□□ -1.26
TRAF3IP2-208ENST00000392556 PLA2G1BP04054 148 aaKnown RBP7.18□□□□□ -1.26
TRAF3IP2-208ENST00000392556 REG3AQ06141 175 aa7.17□□□□□ -1.26
TRAF3IP2-208ENST00000392556 A0A087X002 238 aa7.16□□□□□ -1.26
TRAF3IP2-208ENST00000392556 LINC00313P59037 77 aa7.16□□□□□ -1.26
TRAF3IP2-208ENST00000392556 CNBPP62633 177 aaKnown RBP7.16□□□□□ -1.26
TRAF3IP2-208ENST00000392556 Q6ZSA8 131 aa7.16□□□□□ -1.26
TRAF3IP2-208ENST00000392556 IGKV2D-24A0A075B6R9 120 aa7.15□□□□□ -1.26
TRAF3IP2-208ENST00000392556 SMR3BP02814 79 aaPredicted RBP7.15□□□□□ -1.26
TRAF3IP2-208ENST00000392556 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms