RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FSIP2Q5CZC0 6907 aa8.91□□□□□ -0.98
PTPRK-208ENST00000392449 TRAV13-2A0A0B4J235 113 aa8.89□□□□□ -0.99
PTPRK-208ENST00000392449 TMEM238LA0A1B0GVL6 79 aa8.89□□□□□ -0.99
PTPRK-208ENST00000392449 A4D1N5 150 aa8.89□□□□□ -0.99
PTPRK-208ENST00000392449 NHP2Q9NX24 153 aaKnown RBP8.86□□□□□ -0.99
PTPRK-208ENST00000392449 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
PTPRK-208ENST00000392449 LINC00575Q6W349 94 aa8.84□□□□□ -0.99
PTPRK-208ENST00000392449 Q6ZQY7 126 aa8.83□□□□□ -1
PTPRK-208ENST00000392449 HIST3H2BBQ8N257 126 aa8.83□□□□□ -1
PTPRK-208ENST00000392449 HIST1H2BLQ99880 126 aa8.83□□□□□ -1
PTPRK-208ENST00000392449 KRTAP19-1Q8IUB9 90 aa8.83□□□□□ -1
PTPRK-208ENST00000392449 F8WEM9 126 aa8.82□□□□□ -1
PTPRK-208ENST00000392449 SNRPEP62304 92 aaKnown RBP8.82□□□□□ -1
PTPRK-208ENST00000392449 LCE3BQ5TA77 95 aa8.82□□□□□ -1
PTPRK-208ENST00000392449 TCL1BO95988 128 aa8.81□□□□□ -1
PTPRK-208ENST00000392449 VAMP3Q15836 100 aa8.81□□□□□ -1
PTPRK-208ENST00000392449 C12orf57Q99622 126 aa8.81□□□□□ -1
PTPRK-208ENST00000392449 hADV29S1A0JD25 119 aa8.79□□□□□ -1
PTPRK-208ENST00000392449 CRCT1Q9UGL9 99 aa8.79□□□□□ -1
PTPRK-208ENST00000392449 S100A2P29034 98 aa8.78□□□□□ -1
PTPRK-208ENST00000392449 IGFL1Q6UW32 110 aa8.78□□□□□ -1
PTPRK-208ENST00000392449 HSBP1L1C9JCN9 74 aa8.77□□□□□ -1
PTPRK-208ENST00000392449 KRTAP10-6P60371 365 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-208ENST00000392449 CLEC2BQ92478 149 aa8.77□□□□□ -1.01
PTPRK-208ENST00000392449 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-208ENST00000392449 TRBV7-7A0A0K0K1E9 115 aa8.76□□□□□ -1.01
PTPRK-208ENST00000392449 CFC1BP0CG36 223 aa8.76□□□□□ -1.01
PTPRK-208ENST00000392449 OCIAD2Q56VL3 154 aa8.74□□□□□ -1.01
PTPRK-208ENST00000392449 Q6JHZ5 121 aa8.74□□□□□ -1.01
PTPRK-208ENST00000392449 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
PTPRK-208ENST00000392449 H3BUT2 72 aa8.72□□□□□ -1.01
PTPRK-208ENST00000392449 M0R2T5 61 aa8.72□□□□□ -1.01
PTPRK-208ENST00000392449 HIST1H4GQ99525 98 aa8.72□□□□□ -1.01
PTPRK-208ENST00000392449 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.01
PTPRK-208ENST00000392449 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.7□□□□□ -1.02
PTPRK-208ENST00000392449 SCGB1D1O95968 90 aa8.69□□□□□ -1.02
PTPRK-208ENST00000392449 S100A6P06703 90 aa8.68□□□□□ -1.02
PTPRK-208ENST00000392449 BVES-AS1Q5T3Y7 98 aa8.68□□□□□ -1.02
PTPRK-208ENST00000392449 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
PTPRK-208ENST00000392449 COX8AP10176 69 aa8.67□□□□□ -1.02
PTPRK-208ENST00000392449 KRTAP9-9Q9BYP9 154 aa8.65□□□□□ -1.02
PTPRK-208ENST00000392449 KRTAP9-4Q9BYQ2 154 aa8.65□□□□□ -1.02
PTPRK-208ENST00000392449 CFC1P0CG37 223 aa8.64□□□□□ -1.03
PTPRK-208ENST00000392449 Q75L30 129 aa8.64□□□□□ -1.03
PTPRK-208ENST00000392449 PPDPFLQ8WWR9 84 aa8.64□□□□□ -1.03
PTPRK-208ENST00000392449 FAM218AQ96MZ4 157 aa8.64□□□□□ -1.03
PTPRK-208ENST00000392449 LST1O00453 97 aa8.63□□□□□ -1.03
PTPRK-208ENST00000392449 Q6Q795 121 aa8.63□□□□□ -1.03
PTPRK-208ENST00000392449 C14orf144Q96I85 54 aa8.63□□□□□ -1.03
PTPRK-208ENST00000392449 ATP11AUNQ6ZP68 121 aa8.62□□□□□ -1.03
PTPRK-208ENST00000392449 RAB37Q96AX2 223 aa8.6□□□□□ -1.03
PTPRK-208ENST00000392449 Q96NJ1 140 aa8.6□□□□□ -1.03
PTPRK-208ENST00000392449 DLEU1O43261 78 aa8.59□□□□□ -1.03
PTPRK-208ENST00000392449 PAM16Q9Y3D7 125 aa8.58□□□□□ -1.04
PTPRK-208ENST00000392449 NDUFV3P56181 108 aaKnown RBP8.57□□□□□ -1.04
PTPRK-208ENST00000392449 C2orf91Q6ZV80 131 aa8.57□□□□□ -1.04
PTPRK-208ENST00000392449 TMA7Q9Y2S6 64 aaKnown RBP8.57□□□□□ -1.04
PTPRK-208ENST00000392449 A0A087WSZ3 146 aa8.56□□□□□ -1.04
PTPRK-208ENST00000392449 A0A0B4J2C4 111 aa8.56□□□□□ -1.04
PTPRK-208ENST00000392449 SPATA45Q537H7 98 aa8.56□□□□□ -1.04
PTPRK-208ENST00000392449 SS18L2Q9UHA2 77 aa8.55□□□□□ -1.04
PTPRK-208ENST00000392449 TEN1Q86WV5 123 aa8.54□□□□□ -1.04
PTPRK-208ENST00000392449 HIGD1BQ9P298 99 aa8.54□□□□□ -1.04
PTPRK-208ENST00000392449 H0YGX0 51 aa8.53□□□□□ -1.04
PTPRK-208ENST00000392449 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
PTPRK-208ENST00000392449 H3BMG7 143 aa8.51□□□□□ -1.05
PTPRK-208ENST00000392449 FABP2P12104 132 aa8.51□□□□□ -1.05
PTPRK-208ENST00000392449 LOC105371267A0A1B0GV96 52 aa8.51□□□□□ -1.05
PTPRK-208ENST00000392449 A8MUU9 505 aa8.51□□□□□ -1.05
PTPRK-208ENST00000392449 SNCGO76070 127 aa8.51□□□□□ -1.05
PTPRK-208ENST00000392449 DSCR10P59022 87 aa8.51□□□□□ -1.05
PTPRK-208ENST00000392449 CEND1Q8N111 149 aa8.5□□□□□ -1.05
PTPRK-208ENST00000392449 VAMP8Q9BV40 100 aa8.5□□□□□ -1.05
PTPRK-208ENST00000392449 A0A1B0GV72 72 aa8.49□□□□□ -1.05
PTPRK-208ENST00000392449 A0A1W2PNM2 257 aa8.49□□□□□ -1.05
PTPRK-208ENST00000392449 FXYD2P54710 66 aa8.49□□□□□ -1.05
PTPRK-208ENST00000392449 PRO1854Q9UHT4 67 aa8.48□□□□□ -1.05
PTPRK-208ENST00000392449 TRIAP1O43715 76 aa8.47□□□□□ -1.05
PTPRK-208ENST00000392449 SIGMAR1Q99720 223 aa8.46□□□□□ -1.05
PTPRK-208ENST00000392449 KRTAP4-8A0A0G2JLE6 195 aa8.45□□□□□ -1.06
PTPRK-208ENST00000392449 A0A1B0GX51 115 aa8.44□□□□□ -1.06
PTPRK-208ENST00000392449 KRTAP16-1A8MUX0 517 aa8.44□□□□□ -1.06
PTPRK-208ENST00000392449 K7ERJ3 54 aa8.42□□□□□ -1.06
PTPRK-208ENST00000392449 KRTAP9-8Q9BYQ0 159 aa8.41□□□□□ -1.06
PTPRK-208ENST00000392449 IGKV4-1P06312 121 aa8.4□□□□□ -1.06
PTPRK-208ENST00000392449 DEFB116Q30KQ4 102 aa8.4□□□□□ -1.06
PTPRK-208ENST00000392449 NOTCH2NLQ7Z3S9 236 aa8.4□□□□□ -1.06
PTPRK-208ENST00000392449 H3BS24 57 aa8.39□□□□□ -1.07
PTPRK-208ENST00000392449 TRBV20-1A0A075B6N2 111 aa8.38□□□□□ -1.07
PTPRK-208ENST00000392449 ANKRD29Q8N6D5 301 aa8.38□□□□□ -1.07
PTPRK-208ENST00000392449 LINC00313P59037 77 aa8.38□□□□□ -1.07
PTPRK-208ENST00000392449 ORMDL1Q9P0S3 153 aa8.38□□□□□ -1.07
PTPRK-208ENST00000392449 DNAL4O96015 105 aa8.37□□□□□ -1.07
PTPRK-208ENST00000392449 TRBV7-4A0A0J9YYF1 115 aa8.36□□□□□ -1.07
PTPRK-208ENST00000392449 PSMB2P49721 201 aa8.36□□□□□ -1.07
PTPRK-208ENST00000392449 USH2AO75445 5202 aa8.35□□□□□ -1.07
PTPRK-208ENST00000392449 HSD52Q0P140 79 aa8.33□□□□□ -1.08
PTPRK-208ENST00000392449 CCKP06307 115 aa8.32□□□□□ -1.08
PTPRK-208ENST00000392449 PYY3Q5JQD4 70 aa8.32□□□□□ -1.08
PTPRK-208ENST00000392449 LINC00472Q9H8W2 130 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms