RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
TRAV13-2-201ENST00000390439 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
TRAV13-2-201ENST00000390439 LINC00310P59036 64 aa5□□□□□ -1.61
TRAV13-2-201ENST00000390439 TRBV7-7A0A0K0K1E9 115 aa4.98□□□□□ -1.61
TRAV13-2-201ENST00000390439 IFITM1P13164 125 aa4.98□□□□□ -1.61
TRAV13-2-201ENST00000390439 VAMP3Q15836 100 aa4.98□□□□□ -1.61
TRAV13-2-201ENST00000390439 SCGB1D4Q6XE38 83 aa4.98□□□□□ -1.61
TRAV13-2-201ENST00000390439 Q96NJ1 140 aa4.98□□□□□ -1.61
TRAV13-2-201ENST00000390439 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
TRAV13-2-201ENST00000390439 TRAV13-2A0A0B4J235 113 aa4.97□□□□□ -1.61
TRAV13-2-201ENST00000390439 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
TRAV13-2-201ENST00000390439 SLC7A5P1Q8MH63 180 aa4.97□□□□□ -1.61
TRAV13-2-201ENST00000390439 CLEC2BQ92478 149 aa4.97□□□□□ -1.61
TRAV13-2-201ENST00000390439 LST1O00453 97 aa4.96□□□□□ -1.62
TRAV13-2-201ENST00000390439 Q6ZVH6 145 aa4.96□□□□□ -1.62
TRAV13-2-201ENST00000390439 LINC00846Q9NV44 126 aa4.96□□□□□ -1.62
TRAV13-2-201ENST00000390439 OCIAD2Q56VL3 154 aa4.94□□□□□ -1.62
TRAV13-2-201ENST00000390439 LINC01545Q5VT33 79 aa4.94□□□□□ -1.62
TRAV13-2-201ENST00000390439 PET117Q6UWS5 81 aa4.94□□□□□ -1.62
TRAV13-2-201ENST00000390439 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
TRAV13-2-201ENST00000390439 TTTY13Q9BZ97 58 aa4.94□□□□□ -1.62
TRAV13-2-201ENST00000390439 FAM236DA0A1B0GTK5 79 aa4.93□□□□□ -1.62
TRAV13-2-201ENST00000390439 FAM236CP0DP71 79 aa4.93□□□□□ -1.62
TRAV13-2-201ENST00000390439 IGFL1Q6UW32 110 aa4.93□□□□□ -1.62
TRAV13-2-201ENST00000390439 MUSTN1Q8IVN3 82 aa4.93□□□□□ -1.62
TRAV13-2-201ENST00000390439 hADV29S1A0JD25 119 aa4.92□□□□□ -1.62
TRAV13-2-201ENST00000390439 LINC00575Q6W349 94 aa4.92□□□□□ -1.62
TRAV13-2-201ENST00000390439 Q6ZQY7 126 aa4.92□□□□□ -1.62
TRAV13-2-201ENST00000390439 C20orf166-AS1Q96NR2 134 aa4.92□□□□□ -1.62
TRAV13-2-201ENST00000390439 A8MUU9 505 aa4.91□□□□□ -1.62
TRAV13-2-201ENST00000390439 SCGB1D1O95968 90 aa4.91□□□□□ -1.62
TRAV13-2-201ENST00000390439 MT2AP02795 61 aa4.91□□□□□ -1.62
TRAV13-2-201ENST00000390439 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
TRAV13-2-201ENST00000390439 SNHG12Q9BXW3 62 aa4.91□□□□□ -1.62
TRAV13-2-201ENST00000390439 SS18L2Q9UHA2 77 aa4.91□□□□□ -1.62
TRAV13-2-201ENST00000390439 PPDPFLQ8WWR9 84 aa4.89□□□□□ -1.63
TRAV13-2-201ENST00000390439 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
TRAV13-2-201ENST00000390439 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
TRAV13-2-201ENST00000390439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.88□□□□□ -1.63
TRAV13-2-201ENST00000390439 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
TRAV13-2-201ENST00000390439 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
TRAV13-2-201ENST00000390439 COLCA2A8K830 154 aa4.86□□□□□ -1.63
TRAV13-2-201ENST00000390439 MT1FP04733 61 aa4.86□□□□□ -1.63
TRAV13-2-201ENST00000390439 C3orf79P0CE67 100 aa4.86□□□□□ -1.63
TRAV13-2-201ENST00000390439 KRTDAPP60985 99 aa4.86□□□□□ -1.63
TRAV13-2-201ENST00000390439 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
TRAV13-2-201ENST00000390439 H3BUT2 72 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BKO60814 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 SNCGO76070 127 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BJP06899 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BOP23527 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BBP33778 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BDP58876 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BCP62807 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST2H2BEQ16778 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 ANKRD39Q53RE8 183 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 BVES-AS1Q5T3Y7 98 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 TEN1Q86WV5 123 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BHQ93079 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 C12orf57Q99622 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BNQ99877 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 HIST1H2BMQ99879 126 aa4.84□□□□□ -1.63
TRAV13-2-201ENST00000390439 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
TRAV13-2-201ENST00000390439 TMEM238LA0A1B0GVL6 79 aa4.82□□□□□ -1.64
TRAV13-2-201ENST00000390439 DSCR10P59022 87 aa4.82□□□□□ -1.64
TRAV13-2-201ENST00000390439 LINC00313P59037 77 aa4.82□□□□□ -1.64
TRAV13-2-201ENST00000390439 MTURNQ8N3F0 131 aa4.82□□□□□ -1.64
TRAV13-2-201ENST00000390439 A0A087WSZ3 146 aa4.81□□□□□ -1.64
TRAV13-2-201ENST00000390439 SNRPEP62304 92 aaKnown RBP4.81□□□□□ -1.64
TRAV13-2-201ENST00000390439 ATOH7Q8N100 152 aa4.8□□□□□ -1.64
TRAV13-2-201ENST00000390439 SIGMAR1Q99720 223 aa4.8□□□□□ -1.64
TRAV13-2-201ENST00000390439 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
TRAV13-2-201ENST00000390439 MPLKIPQ8TAP9 179 aa4.79□□□□□ -1.64
TRAV13-2-201ENST00000390439 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
TRAV13-2-201ENST00000390439 HRES1P13985 223 aa4.78□□□□□ -1.64
TRAV13-2-201ENST00000390439 NDUFV3P56181 108 aaKnown RBP4.78□□□□□ -1.64
TRAV13-2-201ENST00000390439 HSBP1L1C9JCN9 74 aa4.76□□□□□ -1.65
TRAV13-2-201ENST00000390439 H3BMG7 143 aa4.76□□□□□ -1.65
TRAV13-2-201ENST00000390439 IGKV4-1P06312 121 aa4.75□□□□□ -1.65
TRAV13-2-201ENST00000390439 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
TRAV13-2-201ENST00000390439 COA6Q5JTJ3 125 aaKnown RBP4.75□□□□□ -1.65
TRAV13-2-201ENST00000390439 NOTCH2NLQ7Z3S9 236 aa4.75□□□□□ -1.65
TRAV13-2-201ENST00000390439 H0YGX0 51 aa4.74□□□□□ -1.65
TRAV13-2-201ENST00000390439 A8MWP4 228 aa4.73□□□□□ -1.65
TRAV13-2-201ENST00000390439 FABP2P12104 132 aa4.73□□□□□ -1.65
TRAV13-2-201ENST00000390439 HIST1H4GQ99525 98 aa4.73□□□□□ -1.65
TRAV13-2-201ENST00000390439 IGHV6-1A0A0B4J1U7 121 aa4.7□□□□□ -1.66
TRAV13-2-201ENST00000390439 A0A1W2PNM2 257 aa4.7□□□□□ -1.66
TRAV13-2-201ENST00000390439 RAB37Q96AX2 223 aa4.7□□□□□ -1.66
TRAV13-2-201ENST00000390439 TRBV7-4A0A0J9YYF1 115 aa4.69□□□□□ -1.66
TRAV13-2-201ENST00000390439 A0A1B0GX51 115 aa4.69□□□□□ -1.66
TRAV13-2-201ENST00000390439 ANKRD29Q8N6D5 301 aa4.69□□□□□ -1.66
TRAV13-2-201ENST00000390439 C8orf87E5RJ46 101 aa4.67□□□□□ -1.66
TRAV13-2-201ENST00000390439 SPINK7P58062 85 aa4.67□□□□□ -1.66
TRAV13-2-201ENST00000390439 DEFB116Q30KQ4 102 aa4.67□□□□□ -1.66
TRAV13-2-201ENST00000390439 FAM218AQ96MZ4 157 aa4.67□□□□□ -1.66
TRAV13-2-201ENST00000390439 H3BQ85 93 aa4.66□□□□□ -1.66
TRAV13-2-201ENST00000390439 ZCCHC13Q8WW36 166 aaKnown RBP4.66□□□□□ -1.66
TRAV13-2-201ENST00000390439 S100A2P29034 98 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms