RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 SNURFQ9Y675 71 aa4.91□□□□□ -1.62
TRBV28-201ENST00000390400 H3BPC8 53 aa4.9□□□□□ -1.63
TRBV28-201ENST00000390400 KIAA0087Q14695 138 aa4.9□□□□□ -1.63
TRBV28-201ENST00000390400 WFDC10BQ8IUB3 73 aa4.9□□□□□ -1.63
TRBV28-201ENST00000390400 LY6G6CO95867 125 aa4.89□□□□□ -1.63
TRBV28-201ENST00000390400 IGKV4-1P06312 121 aa4.89□□□□□ -1.63
TRBV28-201ENST00000390400 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
TRBV28-201ENST00000390400 DNAH10OSP0CZ25 163 aa4.88□□□□□ -1.63
TRBV28-201ENST00000390400 UBE2BP63146 152 aa4.88□□□□□ -1.63
TRBV28-201ENST00000390400 LINC01556Q5JQF7 62 aa4.88□□□□□ -1.63
TRBV28-201ENST00000390400 Q6ZQY7 126 aa4.88□□□□□ -1.63
TRBV28-201ENST00000390400 SPANXA2-OT1Q8N9U9 137 aa4.88□□□□□ -1.63
TRBV28-201ENST00000390400 LINC00474Q9P2X8 69 aa4.88□□□□□ -1.63
TRBV28-201ENST00000390400 PLECQ15149 4684 aaKnown RBP4.87□□□□□ -1.63
TRBV28-201ENST00000390400 IGLV4-60A0A075B6I1 120 aa4.87□□□□□ -1.63
TRBV28-201ENST00000390400 HIGD2BQ4VC39 106 aa4.87□□□□□ -1.63
TRBV28-201ENST00000390400 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
TRBV28-201ENST00000390400 ZCCHC13Q8WW36 166 aaKnown RBP4.87□□□□□ -1.63
TRBV28-201ENST00000390400 LIMD2Q9BT23 127 aa4.87□□□□□ -1.63
TRBV28-201ENST00000390400 LYSTQ99698 3801 aa4.86□□□□□ -1.63
TRBV28-201ENST00000390400 NDUFS5O43920 106 aa4.86□□□□□ -1.63
TRBV28-201ENST00000390400 ANGP03950 147 aaKnown RBP4.86□□□□□ -1.63
TRBV28-201ENST00000390400 IGLV5-48A0A075B6I7 105 aa4.85□□□□□ -1.63
TRBV28-201ENST00000390400 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
TRBV28-201ENST00000390400 ZNF73O43830 326 aaPredicted RBP4.85□□□□□ -1.63
TRBV28-201ENST00000390400 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
TRBV28-201ENST00000390400 KLK12Q9UKR0 248 aa4.85□□□□□ -1.63
TRBV28-201ENST00000390400 DNAH6Q9C0G6 4158 aa4.84□□□□□ -1.63
TRBV28-201ENST00000390400 ETDCA0A1B0GVM5 59 aa4.84□□□□□ -1.63
TRBV28-201ENST00000390400 UBE2AP49459 152 aa4.84□□□□□ -1.63
TRBV28-201ENST00000390400 LINC00269Q8N2A0 174 aa4.84□□□□□ -1.63
TRBV28-201ENST00000390400 Q9BRP9 147 aa4.84□□□□□ -1.63
TRBV28-201ENST00000390400 IGKV3OR2-268A0A0C4DH90 116 aa4.83□□□□□ -1.64
TRBV28-201ENST00000390400 M0R2N4 97 aa4.83□□□□□ -1.64
TRBV28-201ENST00000390400 M0R378 163 aa4.83□□□□□ -1.64
TRBV28-201ENST00000390400 REG3AQ06141 175 aa4.83□□□□□ -1.64
TRBV28-201ENST00000390400 CLPSL2Q6UWE3 100 aa4.83□□□□□ -1.64
TRBV28-201ENST00000390400 MRPL55Q7Z7F7 128 aaKnown RBP4.83□□□□□ -1.64
TRBV28-201ENST00000390400 KRTAP1-5Q9BYS1 174 aa4.83□□□□□ -1.64
TRBV28-201ENST00000390400 VPS13DQ5THJ4 4388 aa4.83□□□□□ -1.64
TRBV28-201ENST00000390400 DNAH1Q9P2D7 4330 aa4.82□□□□□ -1.64
TRBV28-201ENST00000390400 Q6ZR54 194 aa4.82□□□□□ -1.64
TRBV28-201ENST00000390400 Q6ZRP5 223 aa4.82□□□□□ -1.64
TRBV28-201ENST00000390400 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
TRBV28-201ENST00000390400 PRR34Q9NV39 138 aa4.82□□□□□ -1.64
TRBV28-201ENST00000390400 KMT2AQ03164 3969 aa4.81□□□□□ -1.64
TRBV28-201ENST00000390400 HCG22E2RYF7 251 aa4.81□□□□□ -1.64
TRBV28-201ENST00000390400 SPAG11BQ08648 103 aa4.81□□□□□ -1.64
TRBV28-201ENST00000390400 FAM229BQ4G0N7 80 aa4.81□□□□□ -1.64
TRBV28-201ENST00000390400 ATP11AUNQ6ZP68 121 aa4.81□□□□□ -1.64
TRBV28-201ENST00000390400 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
TRBV28-201ENST00000390400 CHCHD10Q8WYQ3 142 aaPredicted RBP4.81□□□□□ -1.64
TRBV28-201ENST00000390400 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
TRBV28-201ENST00000390400 KCNQ1DNQ9H478 68 aa4.81□□□□□ -1.64
TRBV28-201ENST00000390400 IGKV2D-24A0A075B6R9 120 aa4.8□□□□□ -1.64
TRBV28-201ENST00000390400 PHF5AQ7RTV0 110 aaKnown RBP4.8□□□□□ -1.64
TRBV28-201ENST00000390400 SPRR4Q96PI1 79 aa4.8□□□□□ -1.64
TRBV28-201ENST00000390400 DHRS4-AS1Q9P1J3 65 aa4.8□□□□□ -1.64
TRBV28-201ENST00000390400 IGLV10-54A0A075B6I4 117 aa4.79□□□□□ -1.64
TRBV28-201ENST00000390400 A0A087X002 238 aa4.79□□□□□ -1.64
TRBV28-201ENST00000390400 TRAV22A0A0B4J277 110 aa4.79□□□□□ -1.64
TRBV28-201ENST00000390400 PSCAO43653 123 aa4.79□□□□□ -1.64
TRBV28-201ENST00000390400 MP68P56378 58 aa4.79□□□□□ -1.64
TRBV28-201ENST00000390400 C1orf134Q5TEV5 83 aa4.79□□□□□ -1.64
TRBV28-201ENST00000390400 LOC101927531A0A1B0GV80 90 aa4.78□□□□□ -1.64
TRBV28-201ENST00000390400 HIGD2AQ9BW72 106 aa4.78□□□□□ -1.64
TRBV28-201ENST00000390400 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
TRBV28-201ENST00000390400 Q6ZRN7 208 aaPredicted RBP4.77□□□□□ -1.65
TRBV28-201ENST00000390400 Q8NBF4 154 aa4.77□□□□□ -1.65
TRBV28-201ENST00000390400 RPL37AP8A6NKH3 93 aa4.76□□□□□ -1.65
TRBV28-201ENST00000390400 ASB16-AS1Q495Z4 193 aa4.76□□□□□ -1.65
TRBV28-201ENST00000390400 KRTAP26-1Q6PEX3 210 aa4.76□□□□□ -1.65
TRBV28-201ENST00000390400 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
TRBV28-201ENST00000390400 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
TRBV28-201ENST00000390400 PRR3P79522 188 aaKnown RBP4.75□□□□□ -1.65
TRBV28-201ENST00000390400 SYCNQ0VAF6 134 aa4.75□□□□□ -1.65
TRBV28-201ENST00000390400 RTL8CO15255 209 aa4.74□□□□□ -1.65
TRBV28-201ENST00000390400 Q5VV11 94 aa4.74□□□□□ -1.65
TRBV28-201ENST00000390400 Q8NDZ9 215 aa4.74□□□□□ -1.65
TRBV28-201ENST00000390400 SACSQ9NZJ4 4579 aa4.73□□□□□ -1.65
TRBV28-201ENST00000390400 HYDINQ4G0P3 5121 aa4.73□□□□□ -1.65
TRBV28-201ENST00000390400 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.73□□□□□ -1.65
TRBV28-201ENST00000390400 LRCOL1A6NCL2 159 aa4.73□□□□□ -1.65
TRBV28-201ENST00000390400 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
TRBV28-201ENST00000390400 C14orf177Q52M58 125 aa4.73□□□□□ -1.65
TRBV28-201ENST00000390400 SCXQ7RTU7 201 aa4.73□□□□□ -1.65
TRBV28-201ENST00000390400 LINC00208Q96KT6 92 aa4.73□□□□□ -1.65
TRBV28-201ENST00000390400 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
TRBV28-201ENST00000390400 A0A087WTM6 91 aa4.72□□□□□ -1.65
TRBV28-201ENST00000390400 TLX1NBP0CAT3 122 aa4.72□□□□□ -1.65
TRBV28-201ENST00000390400 UNQ6190/PRO20217Q6UXQ8 127 aa4.72□□□□□ -1.65
TRBV28-201ENST00000390400 C15orf56Q8N910 161 aa4.72□□□□□ -1.65
TRBV28-201ENST00000390400 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
TRBV28-201ENST00000390400 FRAS1Q86XX4 4008 aa4.72□□□□□ -1.65
TRBV28-201ENST00000390400 RYR2Q92736 4967 aa4.72□□□□□ -1.65
TRBV28-201ENST00000390400 C6orf48Q9UBA6 75 aa4.71□□□□□ -1.66
TRBV28-201ENST00000390400 IGLV8-61A0A075B6I0 122 aa4.7□□□□□ -1.66
TRBV28-201ENST00000390400 SPRR1AP35321 89 aa4.7□□□□□ -1.66
TRBV28-201ENST00000390400 C1orf137Q5JT78 98 aa4.7□□□□□ -1.66
TRBV28-201ENST00000390400 C7orf65Q6ZTY9 151 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms