RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ZNF861PO60384 105 aa9.32□□□□□ -0.92
PSME4-201ENST00000389993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.32□□□□□ -0.92
PSME4-201ENST00000389993 A8MWP4 228 aa9.29□□□□□ -0.92
PSME4-201ENST00000389993 PMAIP1Q13794 54 aa9.29□□□□□ -0.92
PSME4-201ENST00000389993 TRAV22A0A0B4J277 110 aa9.29□□□□□ -0.92
PSME4-201ENST00000389993 NOTCH1P46531 2555 aa9.29□□□□□ -0.92
PSME4-201ENST00000389993 J3QL48 77 aa9.28□□□□□ -0.92
PSME4-201ENST00000389993 BAHCC1Q9P281 2608 aa9.27□□□□□ -0.92
PSME4-201ENST00000389993 UNC79Q9P2D8 2635 aa9.27□□□□□ -0.93
PSME4-201ENST00000389993 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
PSME4-201ENST00000389993 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
PSME4-201ENST00000389993 A0A1W2PNM2 257 aa9.25□□□□□ -0.93
PSME4-201ENST00000389993 C1orf195Q5TG92 126 aa9.23□□□□□ -0.93
PSME4-201ENST00000389993 LINC00304Q8N9R0 145 aa9.23□□□□□ -0.93
PSME4-201ENST00000389993 MRPL34Q9BQ48 92 aaKnown RBP9.23□□□□□ -0.93
PSME4-201ENST00000389993 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
PSME4-201ENST00000389993 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
PSME4-201ENST00000389993 KRTAP1-5Q9BYS1 174 aa9.21□□□□□ -0.93
PSME4-201ENST00000389993 A0A1B0GU69 56 aa9.21□□□□□ -0.94
PSME4-201ENST00000389993 PRR15Q8IV56 129 aa9.21□□□□□ -0.94
PSME4-201ENST00000389993 STAB1Q9NY15 2570 aa9.21□□□□□ -0.94
PSME4-201ENST00000389993 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
PSME4-201ENST00000389993 C8orf17Q9NRJ1 99 aa9.2□□□□□ -0.94
PSME4-201ENST00000389993 SPRR4Q96PI1 79 aa9.2□□□□□ -0.94
PSME4-201ENST00000389993 ACYP2P14621 99 aa9.19□□□□□ -0.94
PSME4-201ENST00000389993 ITPR2Q14571 2701 aa9.19□□□□□ -0.94
PSME4-201ENST00000389993 ATP11AUNQ6ZP68 121 aa9.18□□□□□ -0.94
PSME4-201ENST00000389993 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
PSME4-201ENST00000389993 ZANQ9Y493 2812 aa9.17□□□□□ -0.94
PSME4-201ENST00000389993 HRNRQ86YZ3 2850 aaPredicted RBP9.16□□□□□ -0.94
PSME4-201ENST00000389993 A0A1B0GVX0 72 aa9.15□□□□□ -0.94
PSME4-201ENST00000389993 CELSR2Q9HCU4 2923 aa9.14□□□□□ -0.95
PSME4-201ENST00000389993 NBPF19A0A087WUL8 3843 aa9.13□□□□□ -0.95
PSME4-201ENST00000389993 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
PSME4-201ENST00000389993 HIVEP1P15822 2718 aa9.12□□□□□ -0.95
PSME4-201ENST00000389993 A0A1B0GW54 56 aa9.11□□□□□ -0.95
PSME4-201ENST00000389993 COA5Q86WW8 74 aa9.1□□□□□ -0.95
PSME4-201ENST00000389993 Q8N1X5 172 aa9.09□□□□□ -0.95
PSME4-201ENST00000389993 DCHS2Q6V1P9 2916 aa9.09□□□□□ -0.95
PSME4-201ENST00000389993 CUBNO60494 3623 aa9.08□□□□□ -0.96
PSME4-201ENST00000389993 A8MUN3 132 aa9.08□□□□□ -0.96
PSME4-201ENST00000389993 WIPF1O43516 503 aa9.07□□□□□ -0.96
PSME4-201ENST00000389993 APCP25054 2843 aa9.07□□□□□ -0.96
PSME4-201ENST00000389993 FBN2P35556 2912 aa9.06□□□□□ -0.96
PSME4-201ENST00000389993 NBEAL1Q6ZS30 2694 aa9.05□□□□□ -0.96
PSME4-201ENST00000389993 SSBP3-AS1Q7Z2R9 100 aa9.05□□□□□ -0.96
PSME4-201ENST00000389993 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
PSME4-201ENST00000389993 SPENQ96T58 3664 aaKnown RBP9.03□□□□□ -0.96
PSME4-201ENST00000389993 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.96
PSME4-201ENST00000389993 LOC101927531A0A1B0GV80 90 aa9.02□□□□□ -0.96
PSME4-201ENST00000389993 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.96
PSME4-201ENST00000389993 KRTAP10-2P60368 255 aa9.02□□□□□ -0.97
PSME4-201ENST00000389993 PANO1I0J062 215 aa9.01□□□□□ -0.97
PSME4-201ENST00000389993 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
PSME4-201ENST00000389993 H7BZZ5 65 aa8.99□□□□□ -0.97
PSME4-201ENST00000389993 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
PSME4-201ENST00000389993 NSD1Q96L73 2696 aaPredicted RBP8.98□□□□□ -0.97
PSME4-201ENST00000389993 H3BPC8 53 aa8.98□□□□□ -0.97
PSME4-201ENST00000389993 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
PSME4-201ENST00000389993 LINC01600Q96MT4 127 aa8.96□□□□□ -0.97
PSME4-201ENST00000389993 CELSR1Q9NYQ6 3014 aa8.95□□□□□ -0.98
PSME4-201ENST00000389993 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
PSME4-201ENST00000389993 KLKP1Q107X0 134 aa8.91□□□□□ -0.98
PSME4-201ENST00000389993 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
PSME4-201ENST00000389993 RPS28P62857 69 aaKnown RBP8.9□□□□□ -0.98
PSME4-201ENST00000389993 NF1P21359 2839 aa8.9□□□□□ -0.98
PSME4-201ENST00000389993 A0A0D9SG42 100 aa8.9□□□□□ -0.99
PSME4-201ENST00000389993 CYSTM1Q9H1C7 97 aa8.9□□□□□ -0.99
PSME4-201ENST00000389993 CSMD2Q7Z408 3487 aa8.89□□□□□ -0.99
PSME4-201ENST00000389993 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
PSME4-201ENST00000389993 PRO0628Q9UI54 55 aa8.88□□□□□ -0.99
PSME4-201ENST00000389993 OCR1Q9BZK8 76 aa8.85□□□□□ -0.99
PSME4-201ENST00000389993 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.99
PSME4-201ENST00000389993 SPRR1AP35321 89 aa8.83□□□□□ -1
PSME4-201ENST00000389993 IGLV7-46A0A075B6I9 117 aa8.82□□□□□ -1
PSME4-201ENST00000389993 KRTAP11-1Q8IUC1 163 aa8.81□□□□□ -1
PSME4-201ENST00000389993 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
PSME4-201ENST00000389993 FAM229BQ4G0N7 80 aa8.78□□□□□ -1
PSME4-201ENST00000389993 BSNQ9UPA5 3926 aa8.78□□□□□ -1
PSME4-201ENST00000389993 STAB2Q8WWQ8 2551 aa8.77□□□□□ -1.01
PSME4-201ENST00000389993 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
PSME4-201ENST00000389993 Q5VSD8 79 aa8.76□□□□□ -1.01
PSME4-201ENST00000389993 MIR22HGQ0VDD5 57 aa8.76□□□□□ -1.01
PSME4-201ENST00000389993 ZFHX3Q15911 3703 aa8.75□□□□□ -1.01
PSME4-201ENST00000389993 HRES1P13985 223 aa8.74□□□□□ -1.01
PSME4-201ENST00000389993 KMT2BQ9UMN6 2715 aaPredicted RBP8.74□□□□□ -1.01
PSME4-201ENST00000389993 UQCR11O14957 56 aa8.73□□□□□ -1.01
PSME4-201ENST00000389993 SPINT4Q6UDR6 99 aa8.73□□□□□ -1.01
PSME4-201ENST00000389993 Q6ZSA8 131 aa8.72□□□□□ -1.01
PSME4-201ENST00000389993 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
PSME4-201ENST00000389993 A0A087X002 238 aa8.69□□□□□ -1.02
PSME4-201ENST00000389993 LCE6AA0A183 80 aa8.69□□□□□ -1.02
PSME4-201ENST00000389993 LINC00472Q9H8W2 130 aa8.69□□□□□ -1.02
PSME4-201ENST00000389993 CD164Q04900 197 aa8.68□□□□□ -1.02
PSME4-201ENST00000389993 TENM4Q6N022 2769 aa8.67□□□□□ -1.02
PSME4-201ENST00000389993 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
PSME4-201ENST00000389993 KRTAP7-1Q8IUC3 87 aa8.66□□□□□ -1.02
PSME4-201ENST00000389993 KRTAP4-16G5E9R7 235 aaPredicted RBP8.63□□□□□ -1.03
PSME4-201ENST00000389993 Q6ZR54 194 aa8.63□□□□□ -1.03
PSME4-201ENST00000389993 Q5W150 140 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms