RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
PPFIA1-202ENST00000389547 RPL37AP61513 92 aaKnown RBP12.32□□□□□ -0.44
PPFIA1-202ENST00000389547 ZNF469Q96JG9 3925 aaPredicted RBP12.3□□□□□ -0.44
PPFIA1-202ENST00000389547 CASC10Q5T4H9 136 aa12.29□□□□□ -0.44
PPFIA1-202ENST00000389547 PKD1L1Q8TDX9 2849 aa12.29□□□□□ -0.44
PPFIA1-202ENST00000389547 Q8N377 158 aa12.29□□□□□ -0.44
PPFIA1-202ENST00000389547 A0A0G2JQZ4 141 aa12.27□□□□□ -0.45
PPFIA1-202ENST00000389547 A0A1W2PNN7 141 aa12.27□□□□□ -0.45
PPFIA1-202ENST00000389547 RBM12B-AS1Q9P1G2 102 aa12.26□□□□□ -0.45
PPFIA1-202ENST00000389547 ATP11AUNQ6ZP68 121 aa12.25□□□□□ -0.45
PPFIA1-202ENST00000389547 LINC00476Q8WZB0 136 aa12.25□□□□□ -0.45
PPFIA1-202ENST00000389547 NBDYA0A0U1RRE5 68 aa12.25□□□□□ -0.45
PPFIA1-202ENST00000389547 GVQW2A0A096LPI5 108 aaPredicted RBP12.24□□□□□ -0.45
PPFIA1-202ENST00000389547 A0A1W2PNM2 257 aa12.24□□□□□ -0.45
PPFIA1-202ENST00000389547 C15orf56Q8N910 161 aa12.24□□□□□ -0.45
PPFIA1-202ENST00000389547 PRLHP81277 87 aa12.24□□□□□ -0.45
PPFIA1-202ENST00000389547 A0A1B0GW54 56 aa12.24□□□□□ -0.45
PPFIA1-202ENST00000389547 Q6ZRX8 168 aa12.24□□□□□ -0.45
PPFIA1-202ENST00000389547 C1orf134Q5TEV5 83 aa12.22□□□□□ -0.45
PPFIA1-202ENST00000389547 COA5Q86WW8 74 aa12.22□□□□□ -0.45
PPFIA1-202ENST00000389547 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
PPFIA1-202ENST00000389547 CYP4F30PQ9H0H9 118 aa12.22□□□□□ -0.45
PPFIA1-202ENST00000389547 Q9BRP9 147 aa12.22□□□□□ -0.45
PPFIA1-202ENST00000389547 CHTF8P0CG12 524 aa12.21□□□□□ -0.45
PPFIA1-202ENST00000389547 FAM168BA1KXE4 195 aa12.19□□□□□ -0.46
PPFIA1-202ENST00000389547 TRRAPQ9Y4A5 3859 aa12.19□□□□□ -0.46
PPFIA1-202ENST00000389547 SERTAD4-AS1Q5TG53 156 aa12.18□□□□□ -0.46
PPFIA1-202ENST00000389547 LOC101927531A0A1B0GV80 90 aa12.17□□□□□ -0.46
PPFIA1-202ENST00000389547 IGLV5-52A0A0A0MRZ9 124 aa12.17□□□□□ -0.46
PPFIA1-202ENST00000389547 APLNQ9ULZ1 77 aa12.15□□□□□ -0.46
PPFIA1-202ENST00000389547 C7orf65Q6ZTY9 151 aa12.14□□□□□ -0.47
PPFIA1-202ENST00000389547 SPINK6Q6UWN8 80 aa12.14□□□□□ -0.47
PPFIA1-202ENST00000389547 IGLV9-49A0A0B4J1Y8 123 aa12.13□□□□□ -0.47
PPFIA1-202ENST00000389547 IGHV6-1A0A0B4J1U7 121 aa12.13□□□□□ -0.47
PPFIA1-202ENST00000389547 H3BPC8 53 aa12.12□□□□□ -0.47
PPFIA1-202ENST00000389547 DSCR10P59022 87 aa12.12□□□□□ -0.47
PPFIA1-202ENST00000389547 Q5VV11 94 aa12.12□□□□□ -0.47
PPFIA1-202ENST00000389547 KCNQ1DNQ9H478 68 aa12.12□□□□□ -0.47
PPFIA1-202ENST00000389547 C16orf90A8MZG2 172 aa12.11□□□□□ -0.47
PPFIA1-202ENST00000389547 ANK3Q12955 4377 aaKnown RBP12.1□□□□□ -0.47
PPFIA1-202ENST00000389547 WWC2-AS2Q96NR7 200 aa12.09□□□□□ -0.47
PPFIA1-202ENST00000389547 IGLV5-48A0A075B6I7 105 aa12.09□□□□□ -0.47
PPFIA1-202ENST00000389547 PHF5AQ7RTV0 110 aaKnown RBP12.08□□□□□ -0.48
PPFIA1-202ENST00000389547 Q8N9P0 234 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-202ENST00000389547 LCA10Q71F78 164 aa12.05□□□□□ -0.48
PPFIA1-202ENST00000389547 IGFL1Q6UW32 110 aa12.05□□□□□ -0.48
PPFIA1-202ENST00000389547 A8MU10 97 aa12.04□□□□□ -0.48
PPFIA1-202ENST00000389547 CDC42SE1Q9NRR8 79 aa12.03□□□□□ -0.48
PPFIA1-202ENST00000389547 TENM2Q9NT68 2774 aa12□□□□□ -0.49
PPFIA1-202ENST00000389547 KRTAP1-5Q9BYS1 174 aa12□□□□□ -0.49
PPFIA1-202ENST00000389547 RTL8CO15255 209 aa11.99□□□□□ -0.49
PPFIA1-202ENST00000389547 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
PPFIA1-202ENST00000389547 SPANXA2-OT1Q8N9U9 137 aa11.99□□□□□ -0.49
PPFIA1-202ENST00000389547 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
PPFIA1-202ENST00000389547 A8MWP4 228 aa11.97□□□□□ -0.49
PPFIA1-202ENST00000389547 TGP01266 2768 aa11.95□□□□□ -0.5
PPFIA1-202ENST00000389547 A0A1B0GU69 56 aa11.94□□□□□ -0.5
PPFIA1-202ENST00000389547 C8orf87E5RJ46 101 aa11.94□□□□□ -0.5
PPFIA1-202ENST00000389547 RETNLBQ9BQ08 111 aa11.93□□□□□ -0.5
PPFIA1-202ENST00000389547 TP53AIP1Q9HCN2 124 aa11.93□□□□□ -0.5
PPFIA1-202ENST00000389547 Q75L30 129 aa11.93□□□□□ -0.5
PPFIA1-202ENST00000389547 A0A087WTM6 91 aa11.92□□□□□ -0.5
PPFIA1-202ENST00000389547 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
PPFIA1-202ENST00000389547 PRAC1Q96KF2 57 aa11.91□□□□□ -0.5
PPFIA1-202ENST00000389547 C9orf163Q8N9P6 203 aa11.9□□□□□ -0.5
PPFIA1-202ENST00000389547 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
PPFIA1-202ENST00000389547 ZCCHC13Q8WW36 166 aaKnown RBP11.86□□□□□ -0.51
PPFIA1-202ENST00000389547 TLX1NBP0CAT3 122 aa11.84□□□□□ -0.51
PPFIA1-202ENST00000389547 PRR26Q8N8Z3 221 aa11.84□□□□□ -0.51
PPFIA1-202ENST00000389547 H3BS24 57 aa11.84□□□□□ -0.51
PPFIA1-202ENST00000389547 ACYP2P14621 99 aa11.84□□□□□ -0.51
PPFIA1-202ENST00000389547 IGLV8-61A0A075B6I0 122 aa11.83□□□□□ -0.52
PPFIA1-202ENST00000389547 MOBPQ13875 183 aa11.82□□□□□ -0.52
PPFIA1-202ENST00000389547 SPINK1P00995 79 aa11.81□□□□□ -0.52
PPFIA1-202ENST00000389547 SPINK7P58062 85 aa11.8□□□□□ -0.52
PPFIA1-202ENST00000389547 TNP2Q05952 138 aa11.8□□□□□ -0.52
PPFIA1-202ENST00000389547 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
PPFIA1-202ENST00000389547 CIRBP-AS1Q8TBR5 109 aa11.79□□□□□ -0.52
PPFIA1-202ENST00000389547 ZNF706Q9Y5V0 76 aaPredicted RBP11.79□□□□□ -0.52
PPFIA1-202ENST00000389547 IGLV7-46A0A075B6I9 117 aa11.78□□□□□ -0.52
PPFIA1-202ENST00000389547 LINC00313P59037 77 aa11.76□□□□□ -0.53
PPFIA1-202ENST00000389547 AKAP9Q99996 3911 aa11.76□□□□□ -0.53
PPFIA1-202ENST00000389547 LINC01558Q9Y6Z2 57 aa11.74□□□□□ -0.53
PPFIA1-202ENST00000389547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.73□□□□□ -0.53
PPFIA1-202ENST00000389547 C8orf17Q9NRJ1 99 aa11.72□□□□□ -0.53
PPFIA1-202ENST00000389547 LINC01554Q52M75 96 aa11.72□□□□□ -0.53
PPFIA1-202ENST00000389547 PLA2G2DQ9UNK4 145 aa11.71□□□□□ -0.54
PPFIA1-202ENST00000389547 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
PPFIA1-202ENST00000389547 LCE6AA0A183 80 aa11.69□□□□□ -0.54
PPFIA1-202ENST00000389547 ANAPC11Q9NYG5 84 aa11.69□□□□□ -0.54
PPFIA1-202ENST00000389547 MIR22HGQ0VDD5 57 aa11.67□□□□□ -0.54
PPFIA1-202ENST00000389547 UQCR11O14957 56 aa11.67□□□□□ -0.54
PPFIA1-202ENST00000389547 A6NN06 94 aa11.66□□□□□ -0.54
PPFIA1-202ENST00000389547 IGKV2D-30A0A075B6S6 120 aa11.65□□□□□ -0.55
PPFIA1-202ENST00000389547 IGKV2-30P06310 120 aa11.65□□□□□ -0.55
PPFIA1-202ENST00000389547 PSORS1C2Q9UIG4 136 aa11.64□□□□□ -0.55
PPFIA1-202ENST00000389547 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
PPFIA1-202ENST00000389547 HRES1P13985 223 aa11.62□□□□□ -0.55
PPFIA1-202ENST00000389547 K7ERS5 55 aa11.62□□□□□ -0.55
PPFIA1-202ENST00000389547 SPRR1AP35321 89 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms