RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 ROMO1P60602 79 aa6.38□□□□□ -1.39
VLDLR-203ENST00000382100 SPRR1BP22528 89 aa6.38□□□□□ -1.39
VLDLR-203ENST00000382100 ZNF575Q86XF7 245 aa6.35□□□□□ -1.39
VLDLR-203ENST00000382100 M0R2T5 61 aa6.35□□□□□ -1.39
VLDLR-203ENST00000382100 SMR3AQ99954 134 aa6.34□□□□□ -1.39
VLDLR-203ENST00000382100 LRBAP50851 2863 aa6.34□□□□□ -1.4
VLDLR-203ENST00000382100 A0A1W2PNM2 257 aa6.34□□□□□ -1.4
VLDLR-203ENST00000382100 PDZD2O15018 2839 aa6.32□□□□□ -1.4
VLDLR-203ENST00000382100 Q5VV11 94 aa6.31□□□□□ -1.4
VLDLR-203ENST00000382100 Q6ZSA8 131 aa6.31□□□□□ -1.4
VLDLR-203ENST00000382100 ZCCHC13Q8WW36 166 aaKnown RBP6.31□□□□□ -1.4
VLDLR-203ENST00000382100 C19orf73Q9NVV2 129 aa6.31□□□□□ -1.4
VLDLR-203ENST00000382100 SPINK7P58062 85 aa6.31□□□□□ -1.4
VLDLR-203ENST00000382100 DSCR10P59022 87 aa6.31□□□□□ -1.4
VLDLR-203ENST00000382100 CHD7Q9P2D1 2997 aa6.3□□□□□ -1.4
VLDLR-203ENST00000382100 A0A087WTM6 91 aa6.3□□□□□ -1.4
VLDLR-203ENST00000382100 R4GN34 69 aa6.29□□□□□ -1.4
VLDLR-203ENST00000382100 FP248Q71RG6 208 aaPredicted RBP6.29□□□□□ -1.4
VLDLR-203ENST00000382100 SPRR1AP35321 89 aa6.28□□□□□ -1.4
VLDLR-203ENST00000382100 Q5XG85 94 aa6.28□□□□□ -1.4
VLDLR-203ENST00000382100 Q6ZR54 194 aa6.28□□□□□ -1.4
VLDLR-203ENST00000382100 M0QZ58 72 aa6.28□□□□□ -1.4
VLDLR-203ENST00000382100 A0A0C4DFX4 3053 aa6.27□□□□□ -1.41
VLDLR-203ENST00000382100 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
VLDLR-203ENST00000382100 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
VLDLR-203ENST00000382100 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
VLDLR-203ENST00000382100 S4R3F8 94 aa6.24□□□□□ -1.41
VLDLR-203ENST00000382100 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
VLDLR-203ENST00000382100 LINC00472Q9H8W2 130 aa6.23□□□□□ -1.41
VLDLR-203ENST00000382100 A0A0D9SG42 100 aa6.23□□□□□ -1.41
VLDLR-203ENST00000382100 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
VLDLR-203ENST00000382100 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
VLDLR-203ENST00000382100 FAM168BA1KXE4 195 aa6.2□□□□□ -1.42
VLDLR-203ENST00000382100 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
VLDLR-203ENST00000382100 GIG44P09565 113 aaPredicted RBP6.18□□□□□ -1.42
VLDLR-203ENST00000382100 A0A1W2PPR1 153 aa6.18□□□□□ -1.42
VLDLR-203ENST00000382100 TENM4Q6N022 2769 aa6.18□□□□□ -1.42
VLDLR-203ENST00000382100 TGP01266 2768 aa6.17□□□□□ -1.42
VLDLR-203ENST00000382100 DNAH12Q6ZR08 3092 aa6.17□□□□□ -1.42
VLDLR-203ENST00000382100 Q8N1X5 172 aa6.17□□□□□ -1.42
VLDLR-203ENST00000382100 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
VLDLR-203ENST00000382100 PANO1I0J062 215 aa6.15□□□□□ -1.42
VLDLR-203ENST00000382100 ZANQ9Y493 2812 aa6.15□□□□□ -1.42
VLDLR-203ENST00000382100 C9orf92A6NGG3 77 aa6.14□□□□□ -1.43
VLDLR-203ENST00000382100 FRYLO94915 3013 aa6.14□□□□□ -1.43
VLDLR-203ENST00000382100 Q5W150 140 aa6.14□□□□□ -1.43
VLDLR-203ENST00000382100 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
VLDLR-203ENST00000382100 SRRM2Q9UQ35 2752 aaKnown RBP6.11□□□□□ -1.43
VLDLR-203ENST00000382100 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
VLDLR-203ENST00000382100 LCE6AA0A183 80 aa6.08□□□□□ -1.44
VLDLR-203ENST00000382100 SRCAPQ6ZRS2 3230 aa6.08□□□□□ -1.44
VLDLR-203ENST00000382100 SMR3BP02814 79 aaPredicted RBP6.08□□□□□ -1.44
VLDLR-203ENST00000382100 KRTAP10-9P60411 292 aa6.07□□□□□ -1.44
VLDLR-203ENST00000382100 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
VLDLR-203ENST00000382100 A0A096LNT2 108 aa6.04□□□□□ -1.44
VLDLR-203ENST00000382100 K7EIL1 84 aa6.03□□□□□ -1.44
VLDLR-203ENST00000382100 CEP350Q5VT06 3117 aa6.02□□□□□ -1.44
VLDLR-203ENST00000382100 A6NN06 94 aa6.02□□□□□ -1.45
VLDLR-203ENST00000382100 TNRC18O15417 2968 aaPredicted RBP6.01□□□□□ -1.45
VLDLR-203ENST00000382100 CRYBG3Q68DQ2 2970 aa6.01□□□□□ -1.45
VLDLR-203ENST00000382100 OXTP01178 125 aa6.01□□□□□ -1.45
VLDLR-203ENST00000382100 KRTAP24-1Q3LI83 254 aa6□□□□□ -1.45
VLDLR-203ENST00000382100 TENM2Q9NT68 2774 aa6□□□□□ -1.45
VLDLR-203ENST00000382100 A0A1W2PNN7 141 aa6□□□□□ -1.45
VLDLR-203ENST00000382100 TNP1P09430 55 aa6□□□□□ -1.45
VLDLR-203ENST00000382100 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
VLDLR-203ENST00000382100 KRTAP29-1A8MX34 341 aaPredicted RBP5.97□□□□□ -1.45
VLDLR-203ENST00000382100 PRAC1Q96KF2 57 aa5.96□□□□□ -1.45
VLDLR-203ENST00000382100 TRIOO75962 3097 aa5.94□□□□□ -1.46
VLDLR-203ENST00000382100 VWFP04275 2813 aa5.92□□□□□ -1.46
VLDLR-203ENST00000382100 MXRA5Q9NR99 2828 aa5.92□□□□□ -1.46
VLDLR-203ENST00000382100 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
VLDLR-203ENST00000382100 ASH1LQ9NR48 2969 aaKnown RBP5.9□□□□□ -1.46
VLDLR-203ENST00000382100 Q5VSD8 79 aa5.89□□□□□ -1.47
VLDLR-203ENST00000382100 KRTAP4-16G5E9R7 235 aaPredicted RBP5.88□□□□□ -1.47
VLDLR-203ENST00000382100 KRTAP26-1Q6PEX3 210 aa5.87□□□□□ -1.47
VLDLR-203ENST00000382100 DCHS2Q6V1P9 2916 aa5.86□□□□□ -1.47
VLDLR-203ENST00000382100 KRTAP10-11P60412 298 aa5.85□□□□□ -1.47
VLDLR-203ENST00000382100 PKD1L1Q8TDX9 2849 aa5.84□□□□□ -1.47
VLDLR-203ENST00000382100 Q8NDZ9 215 aa5.83□□□□□ -1.48
VLDLR-203ENST00000382100 C20orf166-AS1Q96NR2 134 aa5.81□□□□□ -1.48
VLDLR-203ENST00000382100 EP400Q96L91 3159 aa5.8□□□□□ -1.48
VLDLR-203ENST00000382100 LAMA2P24043 3122 aaKnown RBP5.79□□□□□ -1.48
VLDLR-203ENST00000382100 MGAQ8IWI9 3026 aa5.79□□□□□ -1.48
VLDLR-203ENST00000382100 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
VLDLR-203ENST00000382100 ZZEF1O43149 2961 aa5.77□□□□□ -1.49
VLDLR-203ENST00000382100 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
VLDLR-203ENST00000382100 A0A0G2JQZ4 141 aa5.76□□□□□ -1.49
VLDLR-203ENST00000382100 CASC10Q5T4H9 136 aa5.76□□□□□ -1.49
VLDLR-203ENST00000382100 A8MUU9 505 aa5.75□□□□□ -1.49
VLDLR-203ENST00000382100 TACC2O95359 2948 aa5.74□□□□□ -1.49
VLDLR-203ENST00000382100 FRYQ5TBA9 3013 aa5.74□□□□□ -1.49
VLDLR-203ENST00000382100 NBEAQ8NFP9 2946 aa5.68□□□□□ -1.5
VLDLR-203ENST00000382100 COL7A1Q02388 2944 aa5.67□□□□□ -1.5
VLDLR-203ENST00000382100 PCNTO95613 3336 aa5.67□□□□□ -1.5
VLDLR-203ENST00000382100 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
VLDLR-203ENST00000382100 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
VLDLR-203ENST00000382100 P0C880 135 aa5.63□□□□□ -1.51
VLDLR-203ENST00000382100 LAMA1P25391 3075 aa5.62□□□□□ -1.51
VLDLR-203ENST00000382100 CFAP54Q96N23 3096 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms