RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 KRTAP7-1Q8IUC3 87 aa5.25□□□□□ -1.57
PCDH9-202ENST00000377865 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
PCDH9-202ENST00000377865 LAMA1P25391 3075 aa5.24□□□□□ -1.57
PCDH9-202ENST00000377865 MTORP42345 2549 aa5.23□□□□□ -1.57
PCDH9-202ENST00000377865 A0A1B0GU33 70 aa5.23□□□□□ -1.57
PCDH9-202ENST00000377865 C9orf92A6NGG3 77 aa5.23□□□□□ -1.57
PCDH9-202ENST00000377865 CRIPTQ9P021 101 aa5.23□□□□□ -1.57
PCDH9-202ENST00000377865 AKAP13Q12802 2813 aa5.23□□□□□ -1.57
PCDH9-202ENST00000377865 XIRP2A4UGR9 3374 aa5.21□□□□□ -1.58
PCDH9-202ENST00000377865 MGAQ8IWI9 3026 aa5.21□□□□□ -1.58
PCDH9-202ENST00000377865 ZNF292O60281 2723 aa5.21□□□□□ -1.58
PCDH9-202ENST00000377865 ACANP16112 2415 aa5.2□□□□□ -1.58
PCDH9-202ENST00000377865 SPTBN5Q9NRC6 3674 aaKnown RBP5.2□□□□□ -1.58
PCDH9-202ENST00000377865 SZT2Q5T011 3432 aa5.2□□□□□ -1.58
PCDH9-202ENST00000377865 SPATA8Q6RVD6 105 aa5.19□□□□□ -1.58
PCDH9-202ENST00000377865 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
PCDH9-202ENST00000377865 VCANP13611 3396 aa5.17□□□□□ -1.58
PCDH9-202ENST00000377865 FLNAP21333 2647 aaKnown RBP5.17□□□□□ -1.58
PCDH9-202ENST00000377865 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
PCDH9-202ENST00000377865 EPG5Q9HCE0 2579 aa5.16□□□□□ -1.58
PCDH9-202ENST00000377865 A0A087X002 238 aa5.16□□□□□ -1.58
PCDH9-202ENST00000377865 KRTAP11-1Q8IUC1 163 aa5.16□□□□□ -1.58
PCDH9-202ENST00000377865 DSPP15924 2871 aaKnown RBP5.16□□□□□ -1.58
PCDH9-202ENST00000377865 VPS13AQ96RL7 3174 aa5.15□□□□□ -1.59
PCDH9-202ENST00000377865 PANO1I0J062 215 aa5.14□□□□□ -1.59
PCDH9-202ENST00000377865 REV3LO60673 3130 aa5.14□□□□□ -1.59
PCDH9-202ENST00000377865 FRYQ5TBA9 3013 aa5.14□□□□□ -1.59
PCDH9-202ENST00000377865 PRUNE2Q8WUY3 3088 aa5.12□□□□□ -1.59
PCDH9-202ENST00000377865 ZFYVE26Q68DK2 2539 aa5.12□□□□□ -1.59
PCDH9-202ENST00000377865 NOTCH2NLQ7Z3S9 236 aa5.12□□□□□ -1.59
PCDH9-202ENST00000377865 ZZEF1O43149 2961 aa5.11□□□□□ -1.59
PCDH9-202ENST00000377865 H3BS24 57 aa5.11□□□□□ -1.59
PCDH9-202ENST00000377865 FASNP49327 2511 aaKnown RBP5.11□□□□□ -1.59
PCDH9-202ENST00000377865 ITPR3Q14573 2671 aa5.1□□□□□ -1.59
PCDH9-202ENST00000377865 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
PCDH9-202ENST00000377865 A0A0D9SG42 100 aa5.1□□□□□ -1.59
PCDH9-202ENST00000377865 Q6ZRN7 208 aaPredicted RBP5.09□□□□□ -1.59
PCDH9-202ENST00000377865 NBEAQ8NFP9 2946 aa5.09□□□□□ -1.59
PCDH9-202ENST00000377865 CELSR3Q9NYQ7 3312 aa5.09□□□□□ -1.6
PCDH9-202ENST00000377865 A8MU10 97 aa5.08□□□□□ -1.6
PCDH9-202ENST00000377865 USP34Q70CQ2 3546 aa5.08□□□□□ -1.6
PCDH9-202ENST00000377865 WDFY4Q6ZS81 3184 aa5.07□□□□□ -1.6
PCDH9-202ENST00000377865 COL6A3P12111 3177 aa5.06□□□□□ -1.6
PCDH9-202ENST00000377865 CHD6Q8TD26 2715 aa5.06□□□□□ -1.6
PCDH9-202ENST00000377865 SMR3BP02814 79 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-202ENST00000377865 ROMO1P60602 79 aa5.05□□□□□ -1.6
PCDH9-202ENST00000377865 FRYLO94915 3013 aa5.04□□□□□ -1.6
PCDH9-202ENST00000377865 RPS29P62273 56 aaKnown RBP5.04□□□□□ -1.6
PCDH9-202ENST00000377865 S4R3F8 94 aa5.04□□□□□ -1.6
PCDH9-202ENST00000377865 LRBAP50851 2863 aa5.04□□□□□ -1.6
PCDH9-202ENST00000377865 FREM2Q5SZK8 3169 aa5.03□□□□□ -1.6
PCDH9-202ENST00000377865 KALRNO60229 2985 aa5.02□□□□□ -1.61
PCDH9-202ENST00000377865 F8P00451 2351 aa5.02□□□□□ -1.61
PCDH9-202ENST00000377865 RPL37P61927 97 aaKnown RBP5.02□□□□□ -1.61
PCDH9-202ENST00000377865 KRTAP10-1P60331 282 aa5□□□□□ -1.61
PCDH9-202ENST00000377865 HRNRQ86YZ3 2850 aaPredicted RBP5□□□□□ -1.61
PCDH9-202ENST00000377865 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
PCDH9-202ENST00000377865 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
PCDH9-202ENST00000377865 GCN1Q92616 2671 aaKnown RBP4.99□□□□□ -1.61
PCDH9-202ENST00000377865 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
PCDH9-202ENST00000377865 ADGRG4Q8IZF6 3080 aa4.97□□□□□ -1.61
PCDH9-202ENST00000377865 TNRC18O15417 2968 aaPredicted RBP4.96□□□□□ -1.61
PCDH9-202ENST00000377865 ADM2Q7Z4H4 148 aa4.96□□□□□ -1.62
PCDH9-202ENST00000377865 TEX15Q9BXT5 2789 aa4.95□□□□□ -1.62
PCDH9-202ENST00000377865 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
PCDH9-202ENST00000377865 ATRQ13535 2644 aa4.94□□□□□ -1.62
PCDH9-202ENST00000377865 SPEGQ15772 3267 aa4.93□□□□□ -1.62
PCDH9-202ENST00000377865 Q6ZSA8 131 aa4.92□□□□□ -1.62
PCDH9-202ENST00000377865 IGSF10Q6WRI0 2623 aa4.92□□□□□ -1.62
PCDH9-202ENST00000377865 BOD1L1Q8NFC6 3051 aa4.92□□□□□ -1.62
PCDH9-202ENST00000377865 KMT2BQ9UMN6 2715 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-202ENST00000377865 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
PCDH9-202ENST00000377865 USP24Q9UPU5 2620 aa4.9□□□□□ -1.63
PCDH9-202ENST00000377865 TACC2O95359 2948 aa4.89□□□□□ -1.63
PCDH9-202ENST00000377865 SETXQ7Z333 2677 aaKnown RBP4.89□□□□□ -1.63
PCDH9-202ENST00000377865 UNC79Q9P2D8 2635 aa4.87□□□□□ -1.63
PCDH9-202ENST00000377865 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
PCDH9-202ENST00000377865 CFAP46Q8IYW2 2715 aa4.87□□□□□ -1.63
PCDH9-202ENST00000377865 HECTD1Q9ULT8 2610 aa4.87□□□□□ -1.63
PCDH9-202ENST00000377865 MYO15AQ9UKN7 3530 aa4.85□□□□□ -1.63
PCDH9-202ENST00000377865 MAP1AP78559 2803 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-202ENST00000377865 WDFY3Q8IZQ1 3526 aa4.85□□□□□ -1.63
PCDH9-202ENST00000377865 EYSQ5T1H1 3165 aa4.84□□□□□ -1.63
PCDH9-202ENST00000377865 A8MUU9 505 aa4.84□□□□□ -1.63
PCDH9-202ENST00000377865 ATMQ13315 3056 aa4.84□□□□□ -1.63
PCDH9-202ENST00000377865 UTP20O75691 2785 aaKnown RBP4.84□□□□□ -1.64
PCDH9-202ENST00000377865 KRTAP13-3Q3SY46 172 aa4.83□□□□□ -1.64
PCDH9-202ENST00000377865 TEP1Q99973 2627 aaKnown RBP4.83□□□□□ -1.64
PCDH9-202ENST00000377865 C20orf166-AS1Q96NR2 134 aa4.83□□□□□ -1.64
PCDH9-202ENST00000377865 ITPR1Q14643 2758 aa4.83□□□□□ -1.64
PCDH9-202ENST00000377865 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
PCDH9-202ENST00000377865 J3QL48 77 aa4.82□□□□□ -1.64
PCDH9-202ENST00000377865 DMXL2Q8TDJ6 3036 aa4.82□□□□□ -1.64
PCDH9-202ENST00000377865 HELZ2Q9BYK8 2649 aaKnown RBP4.81□□□□□ -1.64
PCDH9-202ENST00000377865 CENPEQ02224 2701 aa4.81□□□□□ -1.64
PCDH9-202ENST00000377865 LOC400499M0QZD8 3231 aa4.8□□□□□ -1.64
PCDH9-202ENST00000377865 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
PCDH9-202ENST00000377865 R4GN34 69 aa4.79□□□□□ -1.64
PCDH9-202ENST00000377865 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
PCDH9-202ENST00000377865 A0A0A0MQY5 61 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms