RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 hDV103S1A0JD37 113 aa9.27□□□□□ -0.93
TCOF1-202ENST00000377797 LINC00336Q6ZUF6 198 aa9.27□□□□□ -0.93
TCOF1-202ENST00000377797 LIMD2Q9BT23 127 aa9.26□□□□□ -0.93
TCOF1-202ENST00000377797 A0A0G2JQZ4 141 aa9.26□□□□□ -0.93
TCOF1-202ENST00000377797 IGFL1Q6UW32 110 aa9.26□□□□□ -0.93
TCOF1-202ENST00000377797 SPACA4Q8TDM5 124 aa9.26□□□□□ -0.93
TCOF1-202ENST00000377797 ZNF861PO60384 105 aa9.25□□□□□ -0.93
TCOF1-202ENST00000377797 KRTAP1-5Q9BYS1 174 aa9.25□□□□□ -0.93
TCOF1-202ENST00000377797 KRTAP26-1Q6PEX3 210 aa9.25□□□□□ -0.93
TCOF1-202ENST00000377797 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
TCOF1-202ENST00000377797 TNP2Q05952 138 aa9.23□□□□□ -0.93
TCOF1-202ENST00000377797 RPL37AP61513 92 aaKnown RBP9.23□□□□□ -0.93
TCOF1-202ENST00000377797 SMG1Q96Q15 3661 aaKnown RBP9.22□□□□□ -0.93
TCOF1-202ENST00000377797 C1orf64Q8NEQ6 169 aa9.22□□□□□ -0.93
TCOF1-202ENST00000377797 LINC01600Q96MT4 127 aa9.22□□□□□ -0.93
TCOF1-202ENST00000377797 RETNLBQ9BQ08 111 aa9.21□□□□□ -0.94
TCOF1-202ENST00000377797 TYMSOSQ8TAI1 123 aa9.2□□□□□ -0.94
TCOF1-202ENST00000377797 ANAPC11Q9NYG5 84 aa9.2□□□□□ -0.94
TCOF1-202ENST00000377797 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
TCOF1-202ENST00000377797 K7EQZ3 153 aa9.18□□□□□ -0.94
TCOF1-202ENST00000377797 OBSCN-AS1Q96MR7 158 aa9.18□□□□□ -0.94
TCOF1-202ENST00000377797 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
TCOF1-202ENST00000377797 A0A1W2PNM2 257 aa9.17□□□□□ -0.94
TCOF1-202ENST00000377797 CELSR1Q9NYQ6 3014 aa9.17□□□□□ -0.94
TCOF1-202ENST00000377797 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
TCOF1-202ENST00000377797 PDZD2O15018 2839 aa9.17□□□□□ -0.94
TCOF1-202ENST00000377797 IGLV7-43P04211 117 aa9.15□□□□□ -0.94
TCOF1-202ENST00000377797 IGLV5-48A0A075B6I7 105 aa9.15□□□□□ -0.94
TCOF1-202ENST00000377797 SPRR4Q96PI1 79 aa9.14□□□□□ -0.95
TCOF1-202ENST00000377797 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
TCOF1-202ENST00000377797 A8MWP4 228 aa9.13□□□□□ -0.95
TCOF1-202ENST00000377797 SPINK1P00995 79 aa9.12□□□□□ -0.95
TCOF1-202ENST00000377797 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
TCOF1-202ENST00000377797 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
TCOF1-202ENST00000377797 SPRR1AP35321 89 aa9.1□□□□□ -0.95
TCOF1-202ENST00000377797 TENM1Q9UKZ4 2725 aa9.09□□□□□ -0.95
TCOF1-202ENST00000377797 OTOGQ6ZRI0 2925 aa9.08□□□□□ -0.96
TCOF1-202ENST00000377797 LINC00313P59037 77 aa9.07□□□□□ -0.96
TCOF1-202ENST00000377797 PRR15Q8IV56 129 aa9.06□□□□□ -0.96
TCOF1-202ENST00000377797 TRAV22A0A0B4J277 110 aa9.06□□□□□ -0.96
TCOF1-202ENST00000377797 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
TCOF1-202ENST00000377797 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
TCOF1-202ENST00000377797 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
TCOF1-202ENST00000377797 H3BPC8 53 aa9.04□□□□□ -0.96
TCOF1-202ENST00000377797 CSMD1Q96PZ7 3565 aa9.04□□□□□ -0.96
TCOF1-202ENST00000377797 A0A1B0GU69 56 aa9.02□□□□□ -0.97
TCOF1-202ENST00000377797 CD164Q04900 197 aa9.01□□□□□ -0.97
TCOF1-202ENST00000377797 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
TCOF1-202ENST00000377797 MRPL34Q9BQ48 92 aaKnown RBP9□□□□□ -0.97
TCOF1-202ENST00000377797 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
TCOF1-202ENST00000377797 ACYP2P14621 99 aa8.99□□□□□ -0.97
TCOF1-202ENST00000377797 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
TCOF1-202ENST00000377797 TENM3Q9P273 2699 aa8.99□□□□□ -0.97
TCOF1-202ENST00000377797 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
TCOF1-202ENST00000377797 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
TCOF1-202ENST00000377797 C8orf87E5RJ46 101 aa8.98□□□□□ -0.97
TCOF1-202ENST00000377797 SPENQ96T58 3664 aaKnown RBP8.97□□□□□ -0.97
TCOF1-202ENST00000377797 SVEP1Q4LDE5 3571 aa8.97□□□□□ -0.97
TCOF1-202ENST00000377797 VWFP04275 2813 aa8.96□□□□□ -0.97
TCOF1-202ENST00000377797 A8MUN3 132 aa8.96□□□□□ -0.98
TCOF1-202ENST00000377797 Q96NJ1 140 aa8.96□□□□□ -0.98
TCOF1-202ENST00000377797 H7BZZ5 65 aa8.95□□□□□ -0.98
TCOF1-202ENST00000377797 DSCR10P59022 87 aa8.95□□□□□ -0.98
TCOF1-202ENST00000377797 NBPF19A0A087WUL8 3843 aa8.94□□□□□ -0.98
TCOF1-202ENST00000377797 C7orf65Q6ZTY9 151 aa8.94□□□□□ -0.98
TCOF1-202ENST00000377797 Q5XG85 94 aa8.94□□□□□ -0.98
TCOF1-202ENST00000377797 Q6ZR54 194 aa8.94□□□□□ -0.98
TCOF1-202ENST00000377797 PANO1I0J062 215 aa8.93□□□□□ -0.98
TCOF1-202ENST00000377797 FBN1P35555 2871 aaKnown RBP8.91□□□□□ -0.98
TCOF1-202ENST00000377797 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
TCOF1-202ENST00000377797 KRTAP10-2P60368 255 aa8.9□□□□□ -0.98
TCOF1-202ENST00000377797 BSNQ9UPA5 3926 aa8.9□□□□□ -0.98
TCOF1-202ENST00000377797 KRTAP4-16G5E9R7 235 aaPredicted RBP8.9□□□□□ -0.99
TCOF1-202ENST00000377797 SPRR1BP22528 89 aa8.89□□□□□ -0.99
TCOF1-202ENST00000377797 COA5Q86WW8 74 aa8.88□□□□□ -0.99
TCOF1-202ENST00000377797 LOC101927531A0A1B0GV80 90 aa8.87□□□□□ -0.99
TCOF1-202ENST00000377797 CYSTM1Q9H1C7 97 aa8.87□□□□□ -0.99
TCOF1-202ENST00000377797 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
TCOF1-202ENST00000377797 Q6ZRN7 208 aaPredicted RBP8.86□□□□□ -0.99
TCOF1-202ENST00000377797 KRTAP10-1P60331 282 aa8.85□□□□□ -0.99
TCOF1-202ENST00000377797 CSMD2Q7Z408 3487 aa8.85□□□□□ -0.99
TCOF1-202ENST00000377797 IGLV8-61A0A075B6I0 122 aa8.84□□□□□ -0.99
TCOF1-202ENST00000377797 ZFHX3Q15911 3703 aa8.83□□□□□ -1
TCOF1-202ENST00000377797 LCE6AA0A183 80 aa8.83□□□□□ -1
TCOF1-202ENST00000377797 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
TCOF1-202ENST00000377797 OCR1Q9BZK8 76 aa8.81□□□□□ -1
TCOF1-202ENST00000377797 C9orf92A6NGG3 77 aa8.81□□□□□ -1
TCOF1-202ENST00000377797 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
TCOF1-202ENST00000377797 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
TCOF1-202ENST00000377797 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
TCOF1-202ENST00000377797 OXTP01178 125 aa8.79□□□□□ -1
TCOF1-202ENST00000377797 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1.01
TCOF1-202ENST00000377797 KRTAP21-3Q3LHN1 58 aa8.75□□□□□ -1.01
TCOF1-202ENST00000377797 FP248Q71RG6 208 aaPredicted RBP8.75□□□□□ -1.01
TCOF1-202ENST00000377797 LINC00472Q9H8W2 130 aa8.75□□□□□ -1.01
TCOF1-202ENST00000377797 J3QL48 77 aa8.74□□□□□ -1.01
TCOF1-202ENST00000377797 DMBT1Q9UGM3 2413 aaPredicted RBP8.73□□□□□ -1.01
TCOF1-202ENST00000377797 CUBNO60494 3623 aa8.73□□□□□ -1.01
TCOF1-202ENST00000377797 UQCR11O14957 56 aa8.72□□□□□ -1.01
TCOF1-202ENST00000377797 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms