RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 CD164Q04900 197 aa13.95□□□□□ -0.18
SYNDIG1-201ENST00000376862 LINC01556Q5JQF7 62 aa13.95□□□□□ -0.18
SYNDIG1-201ENST00000376862 KRTAP29-1A8MX34 341 aaPredicted RBP13.94□□□□□ -0.18
SYNDIG1-201ENST00000376862 MRPL55Q7Z7F7 128 aaKnown RBP13.94□□□□□ -0.18
SYNDIG1-201ENST00000376862 F8P00451 2351 aa13.93□□□□□ -0.18
SYNDIG1-201ENST00000376862 SPANXA2-OT1Q8N9U9 137 aa13.93□□□□□ -0.18
SYNDIG1-201ENST00000376862 LIMD2Q9BT23 127 aa13.92□□□□□ -0.18
SYNDIG1-201ENST00000376862 LINC00588Q9Y4M8 146 aa13.9□□□□□ -0.18
SYNDIG1-201ENST00000376862 CASC10Q5T4H9 136 aa13.9□□□□□ -0.18
SYNDIG1-201ENST00000376862 REG3GQ6UW15 175 aa13.89□□□□□ -0.19
SYNDIG1-201ENST00000376862 CASC2Q6XLA1 102 aa13.88□□□□□ -0.19
SYNDIG1-201ENST00000376862 SPTSSBQ8NFR3 76 aa13.88□□□□□ -0.19
SYNDIG1-201ENST00000376862 LCA10Q71F78 164 aa13.85□□□□□ -0.19
SYNDIG1-201ENST00000376862 CNBPP62633 177 aaKnown RBP13.84□□□□□ -0.19
SYNDIG1-201ENST00000376862 FLNBO75369 2602 aaKnown RBP13.84□□□□□ -0.19
SYNDIG1-201ENST00000376862 H3BPC8 53 aa13.84□□□□□ -0.19
SYNDIG1-201ENST00000376862 KTN1-AS1Q86SY8 53 aa13.84□□□□□ -0.19
SYNDIG1-201ENST00000376862 C9orf163Q8N9P6 203 aa13.83□□□□□ -0.2
SYNDIG1-201ENST00000376862 PRLHP81277 87 aa13.82□□□□□ -0.2
SYNDIG1-201ENST00000376862 Q75L30 129 aa13.8□□□□□ -0.2
SYNDIG1-201ENST00000376862 COA5Q86WW8 74 aa13.79□□□□□ -0.2
SYNDIG1-201ENST00000376862 IGLV8-61A0A075B6I0 122 aa13.79□□□□□ -0.2
SYNDIG1-201ENST00000376862 A6NED7 52 aa13.79□□□□□ -0.2
SYNDIG1-201ENST00000376862 BAHCC1Q9P281 2608 aa13.78□□□□□ -0.2
SYNDIG1-201ENST00000376862 DNAH10OSP0CZ25 163 aa13.78□□□□□ -0.2
SYNDIG1-201ENST00000376862 DEFB131BA0A096LNP1 70 aa13.75□□□□□ -0.21
SYNDIG1-201ENST00000376862 ATP11AUNQ6ZP68 121 aa13.75□□□□□ -0.21
SYNDIG1-201ENST00000376862 RBM12B-AS1Q9P1G2 102 aa13.75□□□□□ -0.21
SYNDIG1-201ENST00000376862 TENM3Q9P273 2699 aa13.74□□□□□ -0.21
SYNDIG1-201ENST00000376862 LOC101927531A0A1B0GV80 90 aa13.74□□□□□ -0.21
SYNDIG1-201ENST00000376862 A8MWP4 228 aa13.73□□□□□ -0.21
SYNDIG1-201ENST00000376862 ANK2Q01484 3957 aa13.72□□□□□ -0.21
SYNDIG1-201ENST00000376862 DNAH1Q9P2D7 4330 aa13.72□□□□□ -0.21
SYNDIG1-201ENST00000376862 OXLD1Q5BKU9 147 aa13.7□□□□□ -0.22
SYNDIG1-201ENST00000376862 A6NN06 94 aa13.7□□□□□ -0.22
SYNDIG1-201ENST00000376862 LINC00472Q9H8W2 130 aa13.69□□□□□ -0.22
SYNDIG1-201ENST00000376862 IGLV7-46A0A075B6I9 117 aa13.69□□□□□ -0.22
SYNDIG1-201ENST00000376862 FBN1P35555 2871 aaKnown RBP13.69□□□□□ -0.22
SYNDIG1-201ENST00000376862 SRRM2Q9UQ35 2752 aaKnown RBP13.67□□□□□ -0.22
SYNDIG1-201ENST00000376862 PCOTHQ58A44 107 aa13.66□□□□□ -0.22
SYNDIG1-201ENST00000376862 STAB1Q9NY15 2570 aa13.66□□□□□ -0.22
SYNDIG1-201ENST00000376862 H0Y9J4 135 aa13.64□□□□□ -0.23
SYNDIG1-201ENST00000376862 CDC42SE1Q9NRR8 79 aa13.64□□□□□ -0.23
SYNDIG1-201ENST00000376862 MMP24-AS1A0A0U1RRL7 71 aa13.64□□□□□ -0.23
SYNDIG1-201ENST00000376862 IGKV2-24A0A0C4DH68 120 aa13.63□□□□□ -0.23
SYNDIG1-201ENST00000376862 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
SYNDIG1-201ENST00000376862 NDUFS5O43920 106 aa13.63□□□□□ -0.23
SYNDIG1-201ENST00000376862 SPAG11AQ6PDA7 123 aa13.62□□□□□ -0.23
SYNDIG1-201ENST00000376862 KRTAP10-11P60412 298 aa13.61□□□□□ -0.23
SYNDIG1-201ENST00000376862 A0A096LNI7 61 aa13.61□□□□□ -0.23
SYNDIG1-201ENST00000376862 PHF5AQ7RTV0 110 aaKnown RBP13.61□□□□□ -0.23
SYNDIG1-201ENST00000376862 KRTAP24-1Q3LI83 254 aa13.58□□□□□ -0.24
SYNDIG1-201ENST00000376862 LINC01558Q9Y6Z2 57 aa13.57□□□□□ -0.24
SYNDIG1-201ENST00000376862 TENM2Q9NT68 2774 aa13.57□□□□□ -0.24
SYNDIG1-201ENST00000376862 MAST4O15021 2626 aa13.56□□□□□ -0.24
SYNDIG1-201ENST00000376862 MOBPQ13875 183 aa13.56□□□□□ -0.24
SYNDIG1-201ENST00000376862 KRTAP11-1Q8IUC1 163 aa13.56□□□□□ -0.24
SYNDIG1-201ENST00000376862 PLAC8Q9NZF1 115 aa13.55□□□□□ -0.24
SYNDIG1-201ENST00000376862 CMYA5Q8N3K9 4069 aa13.53□□□□□ -0.24
SYNDIG1-201ENST00000376862 SPRR1BP22528 89 aa13.52□□□□□ -0.25
SYNDIG1-201ENST00000376862 SPINK7P58062 85 aa13.51□□□□□ -0.25
SYNDIG1-201ENST00000376862 NOTCH1P46531 2555 aa13.5□□□□□ -0.25
SYNDIG1-201ENST00000376862 C7orf65Q6ZTY9 151 aa13.5□□□□□ -0.25
SYNDIG1-201ENST00000376862 DNAH10Q8IVF4 4471 aa13.5□□□□□ -0.25
SYNDIG1-201ENST00000376862 CSMD3Q7Z407 3707 aa13.46□□□□□ -0.25
SYNDIG1-201ENST00000376862 HRES1P13985 223 aa13.46□□□□□ -0.26
SYNDIG1-201ENST00000376862 TP53AIP1Q9HCN2 124 aa13.44□□□□□ -0.26
SYNDIG1-201ENST00000376862 CHTF8P0CG12 524 aa13.43□□□□□ -0.26
SYNDIG1-201ENST00000376862 ASB16-AS1Q495Z4 193 aa13.43□□□□□ -0.26
SYNDIG1-201ENST00000376862 Q6ZR54 194 aa13.43□□□□□ -0.26
SYNDIG1-201ENST00000376862 Q96NJ1 140 aa13.42□□□□□ -0.26
SYNDIG1-201ENST00000376862 COL6A5A8TX70 2615 aa13.41□□□□□ -0.26
SYNDIG1-201ENST00000376862 C8orf17Q9NRJ1 99 aa13.39□□□□□ -0.27
SYNDIG1-201ENST00000376862 NBEAL1Q6ZS30 2694 aa13.36□□□□□ -0.27
SYNDIG1-201ENST00000376862 DNAH3Q8TD57 4116 aa13.33□□□□□ -0.28
SYNDIG1-201ENST00000376862 IGHV6-1A0A0B4J1U7 121 aa13.33□□□□□ -0.28
SYNDIG1-201ENST00000376862 KRTAP1-5Q9BYS1 174 aa13.32□□□□□ -0.28
SYNDIG1-201ENST00000376862 IGLV9-49A0A0B4J1Y8 123 aa13.31□□□□□ -0.28
SYNDIG1-201ENST00000376862 LYSTQ99698 3801 aa13.3□□□□□ -0.28
SYNDIG1-201ENST00000376862 PRR26Q8N8Z3 221 aa13.29□□□□□ -0.28
SYNDIG1-201ENST00000376862 DNAH9Q9NYC9 4486 aa13.27□□□□□ -0.28
SYNDIG1-201ENST00000376862 A0A1B0GVX0 72 aa13.26□□□□□ -0.29
SYNDIG1-201ENST00000376862 MRPL34Q9BQ48 92 aaKnown RBP13.24□□□□□ -0.29
SYNDIG1-201ENST00000376862 K7EIL1 84 aa13.24□□□□□ -0.29
SYNDIG1-201ENST00000376862 A0A087X002 238 aa13.23□□□□□ -0.29
SYNDIG1-201ENST00000376862 NOTCH2NLQ7Z3S9 236 aa13.23□□□□□ -0.29
SYNDIG1-201ENST00000376862 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
SYNDIG1-201ENST00000376862 LINC00313P59037 77 aa13.22□□□□□ -0.29
SYNDIG1-201ENST00000376862 KRTAP13-1Q8IUC0 172 aa13.22□□□□□ -0.29
SYNDIG1-201ENST00000376862 PRAC1Q96KF2 57 aa13.21□□□□□ -0.29
SYNDIG1-201ENST00000376862 MGAM2Q2M2H8 2515 aa13.18□□□□□ -0.3
SYNDIG1-201ENST00000376862 ALMS1Q8TCU4 4167 aa13.18□□□□□ -0.3
SYNDIG1-201ENST00000376862 CDK2AP2O75956 126 aa13.17□□□□□ -0.3
SYNDIG1-201ENST00000376862 C8orf87E5RJ46 101 aa13.16□□□□□ -0.3
SYNDIG1-201ENST00000376862 PANO1I0J062 215 aa13.16□□□□□ -0.3
SYNDIG1-201ENST00000376862 HUWE1Q7Z6Z7 4374 aaKnown RBP13.15□□□□□ -0.3
SYNDIG1-201ENST00000376862 MDFIQ99750 246 aa13.15□□□□□ -0.3
SYNDIG1-201ENST00000376862 Q5W150 140 aa13.13□□□□□ -0.31
SYNDIG1-201ENST00000376862 ADM2Q7Z4H4 148 aa13.13□□□□□ -0.31
SYNDIG1-201ENST00000376862 C14orf177Q52M58 125 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms