RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 Q6ZQY7 126 aa6.98□□□□□ -1.29
LSM2-208ENST00000375661 SMIM29Q86T20 159 aa6.98□□□□□ -1.29
LSM2-208ENST00000375661 PSMB2P49721 201 aa6.97□□□□□ -1.29
LSM2-208ENST00000375661 Q8N377 158 aa6.97□□□□□ -1.29
LSM2-208ENST00000375661 MUC17Q685J3 4493 aa6.97□□□□□ -1.29
LSM2-208ENST00000375661 IGLV9-49A0A0B4J1Y8 123 aa6.96□□□□□ -1.3
LSM2-208ENST00000375661 BATFQ16520 125 aa6.96□□□□□ -1.3
LSM2-208ENST00000375661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.96□□□□□ -1.3
LSM2-208ENST00000375661 MOBPQ13875 183 aa6.95□□□□□ -1.3
LSM2-208ENST00000375661 CLEC2BQ92478 149 aa6.95□□□□□ -1.3
LSM2-208ENST00000375661 A0A1B0GX51 115 aa6.94□□□□□ -1.3
LSM2-208ENST00000375661 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
LSM2-208ENST00000375661 SSBP3-AS1Q7Z2R9 100 aa6.94□□□□□ -1.3
LSM2-208ENST00000375661 LAMTOR3Q9UHA4 124 aa6.94□□□□□ -1.3
LSM2-208ENST00000375661 COX6CP09669 75 aa6.93□□□□□ -1.3
LSM2-208ENST00000375661 Q8NBF4 154 aa6.93□□□□□ -1.3
LSM2-208ENST00000375661 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
LSM2-208ENST00000375661 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
LSM2-208ENST00000375661 SNCGO76070 127 aa6.91□□□□□ -1.3
LSM2-208ENST00000375661 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
LSM2-208ENST00000375661 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
LSM2-208ENST00000375661 FP248Q71RG6 208 aaPredicted RBP6.91□□□□□ -1.3
LSM2-208ENST00000375661 SNHG12Q9BXW3 62 aa6.91□□□□□ -1.3
LSM2-208ENST00000375661 PPDPFLQ8WWR9 84 aa6.9□□□□□ -1.3
LSM2-208ENST00000375661 LST1O00453 97 aa6.89□□□□□ -1.31
LSM2-208ENST00000375661 TAX1BP3O14907 124 aa6.89□□□□□ -1.31
LSM2-208ENST00000375661 OCIAD2Q56VL3 154 aa6.89□□□□□ -1.31
LSM2-208ENST00000375661 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
LSM2-208ENST00000375661 SVIPQ8NHG7 77 aa6.88□□□□□ -1.31
LSM2-208ENST00000375661 PCP4L1A6NKN8 68 aa6.87□□□□□ -1.31
LSM2-208ENST00000375661 TRACP01848 142 aa6.87□□□□□ -1.31
LSM2-208ENST00000375661 A0A0G2JQZ4 141 aa6.86□□□□□ -1.31
LSM2-208ENST00000375661 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
LSM2-208ENST00000375661 H3BUT2 72 aa6.86□□□□□ -1.31
LSM2-208ENST00000375661 TCL1BO95988 128 aa6.86□□□□□ -1.31
LSM2-208ENST00000375661 C4orf48Q5BLP8 95 aa6.86□□□□□ -1.31
LSM2-208ENST00000375661 IGLV8-61A0A075B6I0 122 aa6.85□□□□□ -1.31
LSM2-208ENST00000375661 DNAL4O96015 105 aa6.85□□□□□ -1.31
LSM2-208ENST00000375661 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
LSM2-208ENST00000375661 ORMDL1Q9P0S3 153 aa6.85□□□□□ -1.31
LSM2-208ENST00000375661 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
LSM2-208ENST00000375661 F8WEM9 126 aa6.84□□□□□ -1.31
LSM2-208ENST00000375661 SPINK1P00995 79 aa6.84□□□□□ -1.31
LSM2-208ENST00000375661 NDUFV3P56181 108 aaKnown RBP6.84□□□□□ -1.31
LSM2-208ENST00000375661 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
LSM2-208ENST00000375661 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.32
LSM2-208ENST00000375661 GHRHP01286 108 aa6.83□□□□□ -1.32
LSM2-208ENST00000375661 FABP2P12104 132 aa6.83□□□□□ -1.32
LSM2-208ENST00000375661 ATXN8Q156A1 80 aa6.82□□□□□ -1.32
LSM2-208ENST00000375661 HRCT1Q6UXD1 115 aa6.82□□□□□ -1.32
LSM2-208ENST00000375661 A0A1W2PPM0 123 aa6.81□□□□□ -1.32
LSM2-208ENST00000375661 H3BQ85 93 aa6.81□□□□□ -1.32
LSM2-208ENST00000375661 RPS29P62273 56 aaKnown RBP6.81□□□□□ -1.32
LSM2-208ENST00000375661 CD164Q04900 197 aa6.81□□□□□ -1.32
LSM2-208ENST00000375661 COL5A1-AS1Q5SY13 56 aa6.81□□□□□ -1.32
LSM2-208ENST00000375661 Q6JHZ5 121 aa6.81□□□□□ -1.32
LSM2-208ENST00000375661 IGFL1Q6UW32 110 aa6.81□□□□□ -1.32
LSM2-208ENST00000375661 TMEM256-PLSCR3K7ERE1 68 aa6.8□□□□□ -1.32
LSM2-208ENST00000375661 LYRM7Q5U5X0 104 aa6.8□□□□□ -1.32
LSM2-208ENST00000375661 TRBV20-1A0A075B6N2 111 aa6.79□□□□□ -1.32
LSM2-208ENST00000375661 UBE2V1Q13404 147 aa6.79□□□□□ -1.32
LSM2-208ENST00000375661 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
LSM2-208ENST00000375661 H3BMG7 143 aa6.78□□□□□ -1.32
LSM2-208ENST00000375661 BAALC-AS2P0C853 105 aa6.78□□□□□ -1.32
LSM2-208ENST00000375661 ANKRD29Q8N6D5 301 aa6.75□□□□□ -1.33
LSM2-208ENST00000375661 A0A1B0GV72 72 aa6.74□□□□□ -1.33
LSM2-208ENST00000375661 Q5XG85 94 aa6.74□□□□□ -1.33
LSM2-208ENST00000375661 LIMD2Q9BT23 127 aa6.74□□□□□ -1.33
LSM2-208ENST00000375661 TRBV7-7A0A0K0K1E9 115 aa6.73□□□□□ -1.33
LSM2-208ENST00000375661 C9JAW5 83 aa6.73□□□□□ -1.33
LSM2-208ENST00000375661 Q6Q795 121 aa6.73□□□□□ -1.33
LSM2-208ENST00000375661 SPCS1Q9Y6A9 102 aa6.73□□□□□ -1.33
LSM2-208ENST00000375661 A0A1W2PNM2 257 aa6.72□□□□□ -1.33
LSM2-208ENST00000375661 XP32Q5T750 250 aa6.72□□□□□ -1.33
LSM2-208ENST00000375661 RBM3P98179 157 aaKnown RBP6.71□□□□□ -1.34
LSM2-208ENST00000375661 TEN1Q86WV5 123 aa6.71□□□□□ -1.34
LSM2-208ENST00000375661 TRBV7-4A0A0J9YYF1 115 aa6.7□□□□□ -1.34
LSM2-208ENST00000375661 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
LSM2-208ENST00000375661 MTURNQ8N3F0 131 aa6.7□□□□□ -1.34
LSM2-208ENST00000375661 K7EP34 96 aa6.69□□□□□ -1.34
LSM2-208ENST00000375661 C1orf195Q5TG92 126 aa6.69□□□□□ -1.34
LSM2-208ENST00000375661 H3BT86 120 aa6.68□□□□□ -1.34
LSM2-208ENST00000375661 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
LSM2-208ENST00000375661 JMJD7-PLA2G4BH0Y9G9 81 aa6.67□□□□□ -1.34
LSM2-208ENST00000375661 OBSCN-AS1Q96MR7 158 aa6.67□□□□□ -1.34
LSM2-208ENST00000375661 DSCR8Q96T75 97 aa6.67□□□□□ -1.34
LSM2-208ENST00000375661 A0A087WSZ3 146 aa6.66□□□□□ -1.34
LSM2-208ENST00000375661 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
LSM2-208ENST00000375661 CCKP06307 115 aa6.65□□□□□ -1.34
LSM2-208ENST00000375661 MT1HP80294 61 aa6.65□□□□□ -1.34
LSM2-208ENST00000375661 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.34
LSM2-208ENST00000375661 PRO0461Q9UI25 63 aa6.65□□□□□ -1.34
LSM2-208ENST00000375661 LOC110117498A0A087WWA1 95 aa6.63□□□□□ -1.35
LSM2-208ENST00000375661 Q6ZQT0 140 aa6.63□□□□□ -1.35
LSM2-208ENST00000375661 C14orf132Q9NPU4 83 aa6.63□□□□□ -1.35
LSM2-208ENST00000375661 SS18L2Q9UHA2 77 aa6.63□□□□□ -1.35
LSM2-208ENST00000375661 GTF2H5Q6ZYL4 71 aa6.62□□□□□ -1.35
LSM2-208ENST00000375661 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
LSM2-208ENST00000375661 Q96NJ1 140 aa6.61□□□□□ -1.35
LSM2-208ENST00000375661 PDE6GP18545 87 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms