RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 A8MTW9 85 aa4.28□□□□□ -1.72
PTPN3-202ENST00000374541 GVQW2A0A096LPI5 108 aaPredicted RBP4.28□□□□□ -1.72
PTPN3-202ENST00000374541 LCA10Q71F78 164 aa4.28□□□□□ -1.72
PTPN3-202ENST00000374541 LINC01600Q96MT4 127 aa4.28□□□□□ -1.72
PTPN3-202ENST00000374541 A8MWP4 228 aa4.28□□□□□ -1.72
PTPN3-202ENST00000374541 FAM19A4Q96LR4 140 aa4.28□□□□□ -1.72
PTPN3-202ENST00000374541 SPACA4Q8TDM5 124 aa4.28□□□□□ -1.73
PTPN3-202ENST00000374541 GCN1Q92616 2671 aaKnown RBP4.27□□□□□ -1.73
PTPN3-202ENST00000374541 COA5Q86WW8 74 aa4.27□□□□□ -1.73
PTPN3-202ENST00000374541 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 AGRNO00468 2067 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 FAM218AQ96MZ4 157 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 TEX15Q9BXT5 2789 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 SSBP3-AS1Q7Z2R9 100 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 Q8NAQ8 132 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 MRPL34Q9BQ48 92 aaKnown RBP4.26□□□□□ -1.73
PTPN3-202ENST00000374541 DNAH10OSP0CZ25 163 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 KLKP1Q107X0 134 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 PLXNB1O43157 2135 aa4.26□□□□□ -1.73
PTPN3-202ENST00000374541 UNC79Q9P2D8 2635 aa4.25□□□□□ -1.73
PTPN3-202ENST00000374541 ZNF575Q86XF7 245 aa4.25□□□□□ -1.73
PTPN3-202ENST00000374541 PLA2G2DQ9UNK4 145 aa4.25□□□□□ -1.73
PTPN3-202ENST00000374541 A0A087WTM6 91 aa4.24□□□□□ -1.73
PTPN3-202ENST00000374541 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
PTPN3-202ENST00000374541 APLNQ9ULZ1 77 aa4.24□□□□□ -1.73
PTPN3-202ENST00000374541 A8MUN3 132 aa4.24□□□□□ -1.73
PTPN3-202ENST00000374541 CHTF8P0CG12 524 aa4.23□□□□□ -1.73
PTPN3-202ENST00000374541 MUC4Q99102 2169 aa4.23□□□□□ -1.73
PTPN3-202ENST00000374541 TNP2Q05952 138 aa4.23□□□□□ -1.73
PTPN3-202ENST00000374541 FLNAP21333 2647 aaKnown RBP4.23□□□□□ -1.73
PTPN3-202ENST00000374541 IGLV6-57P01721 117 aa4.22□□□□□ -1.73
PTPN3-202ENST00000374541 Q5VSD8 79 aa4.22□□□□□ -1.73
PTPN3-202ENST00000374541 TENM1Q9UKZ4 2725 aa4.22□□□□□ -1.73
PTPN3-202ENST00000374541 ST20-AS1Q8NBB2 130 aa4.22□□□□□ -1.73
PTPN3-202ENST00000374541 ANK2Q01484 3957 aa4.22□□□□□ -1.73
PTPN3-202ENST00000374541 NOTCH1P46531 2555 aa4.2□□□□□ -1.74
PTPN3-202ENST00000374541 PKD1L1Q8TDX9 2849 aa4.2□□□□□ -1.74
PTPN3-202ENST00000374541 SPANXA2-OT1Q8N9U9 137 aa4.2□□□□□ -1.74
PTPN3-202ENST00000374541 LITAFQ99732 161 aa4.2□□□□□ -1.74
PTPN3-202ENST00000374541 Q96NJ1 140 aa4.2□□□□□ -1.74
PTPN3-202ENST00000374541 PRR15Q8IV56 129 aa4.19□□□□□ -1.74
PTPN3-202ENST00000374541 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
PTPN3-202ENST00000374541 K7EQZ3 153 aa4.19□□□□□ -1.74
PTPN3-202ENST00000374541 KCNQ1DNQ9H478 68 aa4.19□□□□□ -1.74
PTPN3-202ENST00000374541 IGLV8-61A0A075B6I0 122 aa4.19□□□□□ -1.74
PTPN3-202ENST00000374541 C8orf17Q9NRJ1 99 aa4.19□□□□□ -1.74
PTPN3-202ENST00000374541 ANK3Q12955 4377 aaKnown RBP4.19□□□□□ -1.74
PTPN3-202ENST00000374541 KLK9Q2XQG4 91 aa4.18□□□□□ -1.74
PTPN3-202ENST00000374541 PHF5AQ7RTV0 110 aaKnown RBP4.18□□□□□ -1.74
PTPN3-202ENST00000374541 LINC00304Q8N9R0 145 aa4.18□□□□□ -1.74
PTPN3-202ENST00000374541 A0A1B0GVX0 72 aa4.17□□□□□ -1.74
PTPN3-202ENST00000374541 STAB1Q9NY15 2570 aa4.17□□□□□ -1.74
PTPN3-202ENST00000374541 IGLV1-50A0A075B6I6 118 aa4.17□□□□□ -1.74
PTPN3-202ENST00000374541 CSMD3Q7Z407 3707 aa4.17□□□□□ -1.74
PTPN3-202ENST00000374541 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
PTPN3-202ENST00000374541 H7BZZ5 65 aa4.16□□□□□ -1.74
PTPN3-202ENST00000374541 TRRAPQ9Y4A5 3859 aa4.15□□□□□ -1.75
PTPN3-202ENST00000374541 IGFL1Q6UW32 110 aa4.14□□□□□ -1.75
PTPN3-202ENST00000374541 COL6A5A8TX70 2615 aa4.14□□□□□ -1.75
PTPN3-202ENST00000374541 LINC01554Q52M75 96 aa4.13□□□□□ -1.75
PTPN3-202ENST00000374541 FAM104AQ969W3 186 aa4.13□□□□□ -1.75
PTPN3-202ENST00000374541 C15orf56Q8N910 161 aa4.12□□□□□ -1.75
PTPN3-202ENST00000374541 TLX1NBP0CAT3 122 aa4.12□□□□□ -1.75
PTPN3-202ENST00000374541 PSORS1C2Q9UIG4 136 aa4.12□□□□□ -1.75
PTPN3-202ENST00000374541 C9orf129Q5T035 196 aaKnown RBP4.11□□□□□ -1.75
PTPN3-202ENST00000374541 Q1T7F1 81 aa4.11□□□□□ -1.75
PTPN3-202ENST00000374541 DSCR10P59022 87 aa4.1□□□□□ -1.75
PTPN3-202ENST00000374541 ZNF861PO60384 105 aa4.1□□□□□ -1.75
PTPN3-202ENST00000374541 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
PTPN3-202ENST00000374541 OXTP01178 125 aa4.1□□□□□ -1.75
PTPN3-202ENST00000374541 RBM12B-AS1Q9P1G2 102 aa4.1□□□□□ -1.75
PTPN3-202ENST00000374541 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
PTPN3-202ENST00000374541 CR1P17927 2039 aa4.1□□□□□ -1.75
PTPN3-202ENST00000374541 LINC00483Q53H64 154 aa4.09□□□□□ -1.75
PTPN3-202ENST00000374541 Q6ZSA8 131 aa4.09□□□□□ -1.75
PTPN3-202ENST00000374541 C9orf92A6NGG3 77 aa4.09□□□□□ -1.76
PTPN3-202ENST00000374541 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
PTPN3-202ENST00000374541 HIVEP1P15822 2718 aa4.08□□□□□ -1.76
PTPN3-202ENST00000374541 Q8N377 158 aa4.08□□□□□ -1.76
PTPN3-202ENST00000374541 NBEAL1Q6ZS30 2694 aa4.07□□□□□ -1.76
PTPN3-202ENST00000374541 IGLV5-37A0A075B6J1 123 aa4.07□□□□□ -1.76
PTPN3-202ENST00000374541 OBSCN-AS1Q96MR7 158 aa4.06□□□□□ -1.76
PTPN3-202ENST00000374541 COL7A1Q02388 2944 aa4.06□□□□□ -1.76
PTPN3-202ENST00000374541 Q75L30 129 aa4.06□□□□□ -1.76
PTPN3-202ENST00000374541 NSD1Q96L73 2696 aaPredicted RBP4.06□□□□□ -1.76
PTPN3-202ENST00000374541 FAM168BA1KXE4 195 aa4.06□□□□□ -1.76
PTPN3-202ENST00000374541 C9orf163Q8N9P6 203 aa4.06□□□□□ -1.76
PTPN3-202ENST00000374541 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
PTPN3-202ENST00000374541 CMYA5Q8N3K9 4069 aa4.05□□□□□ -1.76
PTPN3-202ENST00000374541 IGLV5-48A0A075B6I7 105 aa4.05□□□□□ -1.76
PTPN3-202ENST00000374541 IGLV7-43P04211 117 aa4.04□□□□□ -1.76
PTPN3-202ENST00000374541 SPRR4Q96PI1 79 aa4.04□□□□□ -1.76
PTPN3-202ENST00000374541 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
PTPN3-202ENST00000374541 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
PTPN3-202ENST00000374541 CSNK1G2-AS1Q8NCQ2 148 aa4.04□□□□□ -1.76
PTPN3-202ENST00000374541 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
PTPN3-202ENST00000374541 CNBPP62633 177 aaKnown RBP4.03□□□□□ -1.76
PTPN3-202ENST00000374541 A0A1W2PNM2 257 aa4.03□□□□□ -1.76
PTPN3-202ENST00000374541 OCR1Q9BZK8 76 aa4.02□□□□□ -1.77
PTPN3-202ENST00000374541 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms