RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 DPH3Q96FX2 82 aa7.6□□□□□ -1.19
HMGCL-202ENST00000374487 BIRC6Q9NR09 4857 aa7.6□□□□□ -1.19
HMGCL-202ENST00000374487 PKD1P98161 4303 aa7.6□□□□□ -1.19
HMGCL-202ENST00000374487 A0A1B0GW54 56 aa7.59□□□□□ -1.19
HMGCL-202ENST00000374487 F8WEM9 126 aa7.59□□□□□ -1.19
HMGCL-202ENST00000374487 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
HMGCL-202ENST00000374487 HECTD4Q9Y4D8 3996 aa7.59□□□□□ -1.19
HMGCL-202ENST00000374487 Q6ZRN7 208 aaPredicted RBP7.59□□□□□ -1.2
HMGCL-202ENST00000374487 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
HMGCL-202ENST00000374487 BPY2O14599 106 aa7.58□□□□□ -1.2
HMGCL-202ENST00000374487 C1orf134Q5TEV5 83 aa7.58□□□□□ -1.2
HMGCL-202ENST00000374487 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
HMGCL-202ENST00000374487 BCE1O60756 84 aa7.57□□□□□ -1.2
HMGCL-202ENST00000374487 Q8NBF4 154 aa7.57□□□□□ -1.2
HMGCL-202ENST00000374487 SMIM29Q86T20 159 aa7.56□□□□□ -1.2
HMGCL-202ENST00000374487 PKHD1P08F94 4074 aa7.56□□□□□ -1.2
HMGCL-202ENST00000374487 SMIM20Q8N5G0 67 aa7.56□□□□□ -1.2
HMGCL-202ENST00000374487 Q8N9L7 120 aa7.56□□□□□ -1.2
HMGCL-202ENST00000374487 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
HMGCL-202ENST00000374487 TRAV7A0A075B6U4 112 aa7.54□□□□□ -1.2
HMGCL-202ENST00000374487 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
HMGCL-202ENST00000374487 EPM2AB3EWF7 344 aa7.54□□□□□ -1.2
HMGCL-202ENST00000374487 UBE2AP49459 152 aa7.53□□□□□ -1.2
HMGCL-202ENST00000374487 SPRR4Q96PI1 79 aa7.53□□□□□ -1.2
HMGCL-202ENST00000374487 H0Y9J4 135 aa7.53□□□□□ -1.2
HMGCL-202ENST00000374487 CYSTM1Q9H1C7 97 aa7.53□□□□□ -1.2
HMGCL-202ENST00000374487 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
HMGCL-202ENST00000374487 PANO1I0J062 215 aa7.52□□□□□ -1.21
HMGCL-202ENST00000374487 C20orf197Q8N268 126 aa7.52□□□□□ -1.21
HMGCL-202ENST00000374487 A0A087WTM6 91 aa7.51□□□□□ -1.21
HMGCL-202ENST00000374487 IGFL1Q6UW32 110 aa7.5□□□□□ -1.21
HMGCL-202ENST00000374487 LINC00336Q6ZUF6 198 aa7.5□□□□□ -1.21
HMGCL-202ENST00000374487 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
HMGCL-202ENST00000374487 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
HMGCL-202ENST00000374487 KIAA1109Q2LD37 5005 aa7.49□□□□□ -1.21
HMGCL-202ENST00000374487 SPACA4Q8TDM5 124 aa7.49□□□□□ -1.21
HMGCL-202ENST00000374487 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
HMGCL-202ENST00000374487 TMEM258P61165 79 aa7.48□□□□□ -1.21
HMGCL-202ENST00000374487 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.48□□□□□ -1.21
HMGCL-202ENST00000374487 IGLV8-61A0A075B6I0 122 aa7.47□□□□□ -1.21
HMGCL-202ENST00000374487 DNAH5Q8TE73 4624 aa7.46□□□□□ -1.21
HMGCL-202ENST00000374487 SPRR1BP22528 89 aa7.46□□□□□ -1.22
HMGCL-202ENST00000374487 A0A087WSZ3 146 aa7.44□□□□□ -1.22
HMGCL-202ENST00000374487 LRP1BQ9NZR2 4599 aa7.44□□□□□ -1.22
HMGCL-202ENST00000374487 DSCR10P59022 87 aa7.43□□□□□ -1.22
HMGCL-202ENST00000374487 SNURFQ9Y675 71 aa7.43□□□□□ -1.22
HMGCL-202ENST00000374487 KLKP1Q107X0 134 aa7.42□□□□□ -1.22
HMGCL-202ENST00000374487 KRTAP13-1Q8IUC0 172 aa7.42□□□□□ -1.22
HMGCL-202ENST00000374487 K7EQZ3 153 aa7.42□□□□□ -1.22
HMGCL-202ENST00000374487 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
HMGCL-202ENST00000374487 DEFB116Q30KQ4 102 aa7.41□□□□□ -1.22
HMGCL-202ENST00000374487 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
HMGCL-202ENST00000374487 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.23
HMGCL-202ENST00000374487 OCR1Q9BZK8 76 aa7.4□□□□□ -1.23
HMGCL-202ENST00000374487 J3KT08 172 aa7.39□□□□□ -1.23
HMGCL-202ENST00000374487 HERC2O95714 4834 aa7.38□□□□□ -1.23
HMGCL-202ENST00000374487 H7BZZ5 65 aa7.38□□□□□ -1.23
HMGCL-202ENST00000374487 TMEM254Q8TBM7 123 aa7.38□□□□□ -1.23
HMGCL-202ENST00000374487 RYR1P21817 5038 aa7.38□□□□□ -1.23
HMGCL-202ENST00000374487 PLAC8Q9NZF1 115 aa7.37□□□□□ -1.23
HMGCL-202ENST00000374487 APOBP04114 4563 aaKnown RBP7.37□□□□□ -1.23
HMGCL-202ENST00000374487 RPS28P62857 69 aaKnown RBP7.37□□□□□ -1.23
HMGCL-202ENST00000374487 FAM30AQ9NZY2 134 aa7.37□□□□□ -1.23
HMGCL-202ENST00000374487 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
HMGCL-202ENST00000374487 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
HMGCL-202ENST00000374487 HSPG2P98160 4391 aa7.36□□□□□ -1.23
HMGCL-202ENST00000374487 HCG22E2RYF7 251 aa7.36□□□□□ -1.23
HMGCL-202ENST00000374487 NDUFC1O43677 76 aa7.36□□□□□ -1.23
HMGCL-202ENST00000374487 ZNF706Q9Y5V0 76 aaPredicted RBP7.35□□□□□ -1.23
HMGCL-202ENST00000374487 FAM236DA0A1B0GTK5 79 aa7.35□□□□□ -1.23
HMGCL-202ENST00000374487 FAM236CP0DP71 79 aa7.35□□□□□ -1.23
HMGCL-202ENST00000374487 KRTAP10-1P60331 282 aa7.35□□□□□ -1.23
HMGCL-202ENST00000374487 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
HMGCL-202ENST00000374487 ZNF861PO60384 105 aa7.32□□□□□ -1.24
HMGCL-202ENST00000374487 LINC00483Q53H64 154 aa7.32□□□□□ -1.24
HMGCL-202ENST00000374487 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
HMGCL-202ENST00000374487 WFDC13Q8IUB5 93 aa7.3□□□□□ -1.24
HMGCL-202ENST00000374487 LINC00472Q9H8W2 130 aa7.3□□□□□ -1.24
HMGCL-202ENST00000374487 DNAH8Q96JB1 4490 aa7.3□□□□□ -1.24
HMGCL-202ENST00000374487 KRTAP4-5Q9BYR2 181 aa7.3□□□□□ -1.24
HMGCL-202ENST00000374487 A8MWP4 228 aa7.29□□□□□ -1.24
HMGCL-202ENST00000374487 PRR15Q8IV56 129 aa7.29□□□□□ -1.24
HMGCL-202ENST00000374487 HRCT1Q6UXD1 115 aa7.28□□□□□ -1.24
HMGCL-202ENST00000374487 PCLOQ9Y6V0 5065 aa7.28□□□□□ -1.24
HMGCL-202ENST00000374487 MOBPQ13875 183 aa7.27□□□□□ -1.24
HMGCL-202ENST00000374487 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.24
HMGCL-202ENST00000374487 C5orf47Q569G3 176 aa7.26□□□□□ -1.25
HMGCL-202ENST00000374487 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
HMGCL-202ENST00000374487 NDUFB1O75438 58 aa7.26□□□□□ -1.25
HMGCL-202ENST00000374487 IGLV7-43P04211 117 aa7.26□□□□□ -1.25
HMGCL-202ENST00000374487 CASC2Q6XLA1 102 aa7.26□□□□□ -1.25
HMGCL-202ENST00000374487 FAT1Q14517 4588 aa7.26□□□□□ -1.25
HMGCL-202ENST00000374487 SERP1Q9Y6X1 66 aa7.25□□□□□ -1.25
HMGCL-202ENST00000374487 OXTP01178 125 aa7.25□□□□□ -1.25
HMGCL-202ENST00000374487 SMR3BP02814 79 aaPredicted RBP7.25□□□□□ -1.25
HMGCL-202ENST00000374487 ATP5EP56381 51 aaPredicted RBP7.25□□□□□ -1.25
HMGCL-202ENST00000374487 CDK2AP2O75956 126 aa7.24□□□□□ -1.25
HMGCL-202ENST00000374487 SVIPQ8NHG7 77 aa7.24□□□□□ -1.25
HMGCL-202ENST00000374487 KRTAP29-1A8MX34 341 aaPredicted RBP7.23□□□□□ -1.25
HMGCL-202ENST00000374487 CIRBP-AS1Q8TBR5 109 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms