RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 HRES1P13985 223 aa6.56□□□□□ -1.36
CD28-202ENST00000374481 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
CD28-202ENST00000374481 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
CD28-202ENST00000374481 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
CD28-202ENST00000374481 MAST4O15021 2626 aa6.54□□□□□ -1.36
CD28-202ENST00000374481 COL12A1Q99715 3063 aa6.54□□□□□ -1.36
CD28-202ENST00000374481 AKAP13Q12802 2813 aa6.53□□□□□ -1.36
CD28-202ENST00000374481 LCE6AA0A183 80 aa6.52□□□□□ -1.37
CD28-202ENST00000374481 PLA2G2DQ9UNK4 145 aa6.52□□□□□ -1.37
CD28-202ENST00000374481 H3BNG1 76 aa6.51□□□□□ -1.37
CD28-202ENST00000374481 CSMD1Q96PZ7 3565 aa6.51□□□□□ -1.37
CD28-202ENST00000374481 KRTAP10-9P60411 292 aa6.51□□□□□ -1.37
CD28-202ENST00000374481 UNC79Q9P2D8 2635 aa6.5□□□□□ -1.37
CD28-202ENST00000374481 ASB16-AS1Q495Z4 193 aa6.5□□□□□ -1.37
CD28-202ENST00000374481 C19orf73Q9NVV2 129 aa6.5□□□□□ -1.37
CD28-202ENST00000374481 USP24Q9UPU5 2620 aa6.5□□□□□ -1.37
CD28-202ENST00000374481 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
CD28-202ENST00000374481 ADM2Q7Z4H4 148 aa6.49□□□□□ -1.37
CD28-202ENST00000374481 KALRNO60229 2985 aa6.49□□□□□ -1.37
CD28-202ENST00000374481 TLX1NBP0CAT3 122 aa6.49□□□□□ -1.37
CD28-202ENST00000374481 MMP24-AS1A0A0U1RRL7 71 aa6.48□□□□□ -1.37
CD28-202ENST00000374481 SMR3AQ99954 134 aa6.48□□□□□ -1.37
CD28-202ENST00000374481 CHTF8P0CG12 524 aa6.45□□□□□ -1.38
CD28-202ENST00000374481 WWC2-AS2Q96NR7 200 aa6.45□□□□□ -1.38
CD28-202ENST00000374481 ITPR1Q14643 2758 aa6.44□□□□□ -1.38
CD28-202ENST00000374481 CHD6Q8TD26 2715 aa6.44□□□□□ -1.38
CD28-202ENST00000374481 TNP2Q05952 138 aa6.43□□□□□ -1.38
CD28-202ENST00000374481 SVEP1Q4LDE5 3571 aa6.43□□□□□ -1.38
CD28-202ENST00000374481 MAP1AP78559 2803 aaPredicted RBP6.43□□□□□ -1.38
CD28-202ENST00000374481 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
CD28-202ENST00000374481 KRTAP29-1A8MX34 341 aaPredicted RBP6.42□□□□□ -1.38
CD28-202ENST00000374481 RTL8CO15255 209 aa6.42□□□□□ -1.38
CD28-202ENST00000374481 GCN1Q92616 2671 aaKnown RBP6.42□□□□□ -1.38
CD28-202ENST00000374481 DNAH10OSP0CZ25 163 aa6.42□□□□□ -1.38
CD28-202ENST00000374481 ZZEF1O43149 2961 aa6.41□□□□□ -1.38
CD28-202ENST00000374481 KRTAP24-1Q3LI83 254 aa6.41□□□□□ -1.38
CD28-202ENST00000374481 ZNF292O60281 2723 aa6.41□□□□□ -1.38
CD28-202ENST00000374481 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.38
CD28-202ENST00000374481 SPRR1AP35321 89 aa6.4□□□□□ -1.38
CD28-202ENST00000374481 CRIPTQ9P021 101 aa6.4□□□□□ -1.38
CD28-202ENST00000374481 ADGRG4Q8IZF6 3080 aa6.39□□□□□ -1.39
CD28-202ENST00000374481 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
CD28-202ENST00000374481 CENPEQ02224 2701 aa6.38□□□□□ -1.39
CD28-202ENST00000374481 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
CD28-202ENST00000374481 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
CD28-202ENST00000374481 NBEAL2Q6ZNJ1 2754 aa6.36□□□□□ -1.39
CD28-202ENST00000374481 TACC2O95359 2948 aa6.34□□□□□ -1.39
CD28-202ENST00000374481 CASC10Q5T4H9 136 aa6.34□□□□□ -1.39
CD28-202ENST00000374481 BSNQ9UPA5 3926 aa6.34□□□□□ -1.39
CD28-202ENST00000374481 ITPR3Q14573 2671 aa6.34□□□□□ -1.39
CD28-202ENST00000374481 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
CD28-202ENST00000374481 A0A1B0GU33 70 aa6.31□□□□□ -1.4
CD28-202ENST00000374481 Q6ZR54 194 aa6.31□□□□□ -1.4
CD28-202ENST00000374481 Q8N1X5 172 aa6.31□□□□□ -1.4
CD28-202ENST00000374481 LRBAP50851 2863 aa6.3□□□□□ -1.4
CD28-202ENST00000374481 DMXL2Q8TDJ6 3036 aa6.3□□□□□ -1.4
CD28-202ENST00000374481 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
CD28-202ENST00000374481 FLG2Q5D862 2391 aaPredicted RBP6.29□□□□□ -1.4
CD28-202ENST00000374481 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
CD28-202ENST00000374481 Q96NJ1 140 aa6.29□□□□□ -1.4
CD28-202ENST00000374481 APLNQ9ULZ1 77 aa6.28□□□□□ -1.4
CD28-202ENST00000374481 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
CD28-202ENST00000374481 CFAP46Q8IYW2 2715 aa6.27□□□□□ -1.41
CD28-202ENST00000374481 LY6G6CO95867 125 aa6.27□□□□□ -1.41
CD28-202ENST00000374481 TEP1Q99973 2627 aaKnown RBP6.26□□□□□ -1.41
CD28-202ENST00000374481 IGLV7-43P04211 117 aa6.26□□□□□ -1.41
CD28-202ENST00000374481 ROMO1P60602 79 aa6.26□□□□□ -1.41
CD28-202ENST00000374481 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
CD28-202ENST00000374481 K7EIL1 84 aa6.26□□□□□ -1.41
CD28-202ENST00000374481 KRTAP25-1Q3LHN0 102 aa6.26□□□□□ -1.41
CD28-202ENST00000374481 ASH1LQ9NR48 2969 aaKnown RBP6.25□□□□□ -1.41
CD28-202ENST00000374481 IGLV5-52A0A0A0MRZ9 124 aa6.25□□□□□ -1.41
CD28-202ENST00000374481 NUPR2A6NF83 97 aa6.25□□□□□ -1.41
CD28-202ENST00000374481 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
CD28-202ENST00000374481 SPRR1BP22528 89 aa6.24□□□□□ -1.41
CD28-202ENST00000374481 A0A087X002 238 aa6.24□□□□□ -1.41
CD28-202ENST00000374481 NOTCH1P46531 2555 aa6.24□□□□□ -1.41
CD28-202ENST00000374481 ATRQ13535 2644 aa6.24□□□□□ -1.41
CD28-202ENST00000374481 Q5W150 140 aa6.23□□□□□ -1.41
CD28-202ENST00000374481 A0A0D9SG42 100 aa6.23□□□□□ -1.41
CD28-202ENST00000374481 FLNAP21333 2647 aaKnown RBP6.22□□□□□ -1.41
CD28-202ENST00000374481 ZNF861PO60384 105 aa6.22□□□□□ -1.41
CD28-202ENST00000374481 CUBNO60494 3623 aa6.21□□□□□ -1.42
CD28-202ENST00000374481 A0A0A0MQY5 61 aa6.17□□□□□ -1.42
CD28-202ENST00000374481 HRNRQ86YZ3 2850 aaPredicted RBP6.17□□□□□ -1.42
CD28-202ENST00000374481 MGAM2Q2M2H8 2515 aa6.16□□□□□ -1.42
CD28-202ENST00000374481 NBEAL1Q6ZS30 2694 aa6.16□□□□□ -1.42
CD28-202ENST00000374481 NDUFAF8A1L188 74 aa6.15□□□□□ -1.42
CD28-202ENST00000374481 PSORS1C2Q9UIG4 136 aa6.15□□□□□ -1.42
CD28-202ENST00000374481 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
CD28-202ENST00000374481 J3QL48 77 aa6.13□□□□□ -1.43
CD28-202ENST00000374481 COL6A5A8TX70 2615 aa6.13□□□□□ -1.43
CD28-202ENST00000374481 NBDYA0A0U1RRE5 68 aa6.13□□□□□ -1.43
CD28-202ENST00000374481 PLAC8Q9NZF1 115 aa6.13□□□□□ -1.43
CD28-202ENST00000374481 KRTAP10-3P60369 221 aa6.12□□□□□ -1.43
CD28-202ENST00000374481 STAB1Q9NY15 2570 aa6.12□□□□□ -1.43
CD28-202ENST00000374481 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
CD28-202ENST00000374481 CRYBG3Q68DQ2 2970 aa6.1□□□□□ -1.43
CD28-202ENST00000374481 NOTCH2NLQ7Z3S9 236 aa6.1□□□□□ -1.43
CD28-202ENST00000374481 DCHS2Q6V1P9 2916 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms