RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 Q6ZVQ6 151 aa7.74□□□□□ -1.17
PRPF4-202ENST00000374199 A0A1W2PNM2 257 aa7.73□□□□□ -1.17
PRPF4-202ENST00000374199 Q6ZSA8 131 aa7.73□□□□□ -1.17
PRPF4-202ENST00000374199 UBL5Q9BZL1 73 aa7.73□□□□□ -1.17
PRPF4-202ENST00000374199 LINC00483Q53H64 154 aa7.73□□□□□ -1.17
PRPF4-202ENST00000374199 FAM19A1Q7Z5A9 133 aa7.73□□□□□ -1.17
PRPF4-202ENST00000374199 COX7CP15954 63 aa7.72□□□□□ -1.17
PRPF4-202ENST00000374199 PRLHP81277 87 aa7.72□□□□□ -1.17
PRPF4-202ENST00000374199 A0A087WVE0 104 aa7.72□□□□□ -1.17
PRPF4-202ENST00000374199 UBE2BP63146 152 aa7.71□□□□□ -1.17
PRPF4-202ENST00000374199 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.17
PRPF4-202ENST00000374199 Q8NBF4 154 aa7.71□□□□□ -1.18
PRPF4-202ENST00000374199 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
PRPF4-202ENST00000374199 TGP01266 2768 aa7.69□□□□□ -1.18
PRPF4-202ENST00000374199 CRYGAP11844 174 aa7.69□□□□□ -1.18
PRPF4-202ENST00000374199 LY6G6CO95867 125 aa7.69□□□□□ -1.18
PRPF4-202ENST00000374199 C1orf137Q5JT78 98 aa7.68□□□□□ -1.18
PRPF4-202ENST00000374199 DEFB105AQ8NG35 78 aa7.68□□□□□ -1.18
PRPF4-202ENST00000374199 ATOX1O00244 68 aa7.68□□□□□ -1.18
PRPF4-202ENST00000374199 IGFL1Q6UW32 110 aa7.66□□□□□ -1.18
PRPF4-202ENST00000374199 KRTAP10-2P60368 255 aa7.65□□□□□ -1.18
PRPF4-202ENST00000374199 LRP1BQ9NZR2 4599 aa7.65□□□□□ -1.19
PRPF4-202ENST00000374199 RYR2Q92736 4967 aa7.64□□□□□ -1.19
PRPF4-202ENST00000374199 J3KT08 172 aa7.64□□□□□ -1.19
PRPF4-202ENST00000374199 PSORS1C2Q9UIG4 136 aa7.64□□□□□ -1.19
PRPF4-202ENST00000374199 FUSP35637 526 aaKnown RBP eCLIP7.63□□□□□ -1.19
PRPF4-202ENST00000374199 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
PRPF4-202ENST00000374199 PKHD1P08F94 4074 aa7.62□□□□□ -1.19
PRPF4-202ENST00000374199 HIGD2AQ9BW72 106 aa7.62□□□□□ -1.19
PRPF4-202ENST00000374199 SRRM2Q9UQ35 2752 aaKnown RBP7.62□□□□□ -1.19
PRPF4-202ENST00000374199 SERP2Q8N6R1 65 aa7.61□□□□□ -1.19
PRPF4-202ENST00000374199 UBE2AP49459 152 aa7.61□□□□□ -1.19
PRPF4-202ENST00000374199 ZNF861PO60384 105 aa7.6□□□□□ -1.19
PRPF4-202ENST00000374199 IGKV4-1P06312 121 aa7.6□□□□□ -1.19
PRPF4-202ENST00000374199 VPS13BQ7Z7G8 4022 aa7.6□□□□□ -1.19
PRPF4-202ENST00000374199 FAM30AQ9NZY2 134 aa7.59□□□□□ -1.19
PRPF4-202ENST00000374199 DPH3Q96FX2 82 aa7.58□□□□□ -1.2
PRPF4-202ENST00000374199 F8WEM9 126 aa7.58□□□□□ -1.2
PRPF4-202ENST00000374199 PKHD1L1Q86WI1 4243 aa7.58□□□□□ -1.2
PRPF4-202ENST00000374199 KRTAP10-1P60331 282 aa7.57□□□□□ -1.2
PRPF4-202ENST00000374199 NREPQ16612 68 aa7.57□□□□□ -1.2
PRPF4-202ENST00000374199 CIRBP-AS1Q8TBR5 109 aa7.57□□□□□ -1.2
PRPF4-202ENST00000374199 ZNF706Q9Y5V0 76 aaPredicted RBP7.57□□□□□ -1.2
PRPF4-202ENST00000374199 DYNC1H1Q14204 4646 aaKnown RBP7.56□□□□□ -1.2
PRPF4-202ENST00000374199 OXTP01178 125 aa7.56□□□□□ -1.2
PRPF4-202ENST00000374199 IGLV7-43P04211 117 aa7.56□□□□□ -1.2
PRPF4-202ENST00000374199 LCE6AA0A183 80 aa7.55□□□□□ -1.2
PRPF4-202ENST00000374199 DSCR10P59022 87 aa7.55□□□□□ -1.2
PRPF4-202ENST00000374199 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
PRPF4-202ENST00000374199 TMEM258P61165 79 aa7.55□□□□□ -1.2
PRPF4-202ENST00000374199 HAMPP81172 84 aa7.55□□□□□ -1.2
PRPF4-202ENST00000374199 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
PRPF4-202ENST00000374199 C5orf47Q569G3 176 aa7.54□□□□□ -1.2
PRPF4-202ENST00000374199 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
PRPF4-202ENST00000374199 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
PRPF4-202ENST00000374199 LINC00472Q9H8W2 130 aa7.52□□□□□ -1.21
PRPF4-202ENST00000374199 A0A0G2JQZ4 141 aa7.52□□□□□ -1.21
PRPF4-202ENST00000374199 BPY2O14599 106 aa7.52□□□□□ -1.21
PRPF4-202ENST00000374199 C4orf26Q17RF5 130 aa7.52□□□□□ -1.21
PRPF4-202ENST00000374199 C20orf197Q8N268 126 aa7.52□□□□□ -1.21
PRPF4-202ENST00000374199 LINC00336Q6ZUF6 198 aa7.5□□□□□ -1.21
PRPF4-202ENST00000374199 Q96NJ1 140 aa7.5□□□□□ -1.21
PRPF4-202ENST00000374199 KMT2CQ8NEZ4 4911 aaKnown RBP7.49□□□□□ -1.21
PRPF4-202ENST00000374199 HRCT1Q6UXD1 115 aa7.48□□□□□ -1.21
PRPF4-202ENST00000374199 TRAV7A0A075B6U4 112 aa7.47□□□□□ -1.21
PRPF4-202ENST00000374199 A0A087WSZ3 146 aa7.46□□□□□ -1.21
PRPF4-202ENST00000374199 OCR1Q9BZK8 76 aa7.46□□□□□ -1.21
PRPF4-202ENST00000374199 Q8N9L7 120 aa7.45□□□□□ -1.22
PRPF4-202ENST00000374199 CD164Q04900 197 aa7.45□□□□□ -1.22
PRPF4-202ENST00000374199 Q5XG85 94 aa7.44□□□□□ -1.22
PRPF4-202ENST00000374199 K7EQZ3 153 aa7.44□□□□□ -1.22
PRPF4-202ENST00000374199 ASB16-AS1Q495Z4 193 aa7.44□□□□□ -1.22
PRPF4-202ENST00000374199 FAM229BQ4G0N7 80 aa7.44□□□□□ -1.22
PRPF4-202ENST00000374199 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
PRPF4-202ENST00000374199 KRTAP29-1A8MX34 341 aaPredicted RBP7.43□□□□□ -1.22
PRPF4-202ENST00000374199 KRTAP1-4P0C5Y4 121 aa7.42□□□□□ -1.22
PRPF4-202ENST00000374199 MOBPQ13875 183 aa7.42□□□□□ -1.22
PRPF4-202ENST00000374199 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
PRPF4-202ENST00000374199 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
PRPF4-202ENST00000374199 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
PRPF4-202ENST00000374199 A8MWP4 228 aa7.4□□□□□ -1.22
PRPF4-202ENST00000374199 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
PRPF4-202ENST00000374199 H7BZZ5 65 aa7.4□□□□□ -1.23
PRPF4-202ENST00000374199 SSBP3-AS1Q7Z2R9 100 aa7.39□□□□□ -1.23
PRPF4-202ENST00000374199 PRR15Q8IV56 129 aa7.39□□□□□ -1.23
PRPF4-202ENST00000374199 IGLV9-49A0A0B4J1Y8 123 aa7.39□□□□□ -1.23
PRPF4-202ENST00000374199 KRTAP13-2Q52LG2 175 aa7.38□□□□□ -1.23
PRPF4-202ENST00000374199 ANAPC11Q9NYG5 84 aa7.37□□□□□ -1.23
PRPF4-202ENST00000374199 HCG22E2RYF7 251 aa7.37□□□□□ -1.23
PRPF4-202ENST00000374199 RYR3Q15413 4870 aa7.35□□□□□ -1.23
PRPF4-202ENST00000374199 A0A087X002 238 aa7.34□□□□□ -1.23
PRPF4-202ENST00000374199 A0A0U1RQV1 116 aa7.33□□□□□ -1.24
PRPF4-202ENST00000374199 MMP24-AS1A0A0U1RRL7 71 aa7.33□□□□□ -1.24
PRPF4-202ENST00000374199 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
PRPF4-202ENST00000374199 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
PRPF4-202ENST00000374199 SPINK6Q6UWN8 80 aa7.31□□□□□ -1.24
PRPF4-202ENST00000374199 DEFB116Q30KQ4 102 aa7.31□□□□□ -1.24
PRPF4-202ENST00000374199 HSPG2P98160 4391 aa7.29□□□□□ -1.24
PRPF4-202ENST00000374199 FP248Q71RG6 208 aaPredicted RBP7.28□□□□□ -1.24
PRPF4-202ENST00000374199 TMEM254Q8TBM7 123 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms