RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 LCE6AA0A183 80 aa6.01□□□□□ -1.45
TRERF1-204ENST00000372922 SPRR1BP22528 89 aa6.01□□□□□ -1.45
TRERF1-204ENST00000372922 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
TRERF1-204ENST00000372922 R4GN34 69 aa6□□□□□ -1.45
TRERF1-204ENST00000372922 Q5W150 140 aa6□□□□□ -1.45
TRERF1-204ENST00000372922 FLNAP21333 2647 aaKnown RBP5.99□□□□□ -1.45
TRERF1-204ENST00000372922 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
TRERF1-204ENST00000372922 PLAC4Q8WY50 150 aa5.97□□□□□ -1.45
TRERF1-204ENST00000372922 ITPR3Q14573 2671 aa5.97□□□□□ -1.45
TRERF1-204ENST00000372922 LINC00472Q9H8W2 130 aa5.97□□□□□ -1.45
TRERF1-204ENST00000372922 C20orf166-AS1Q96NR2 134 aa5.96□□□□□ -1.46
TRERF1-204ENST00000372922 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
TRERF1-204ENST00000372922 Q8NDZ9 215 aa5.95□□□□□ -1.46
TRERF1-204ENST00000372922 SPATA8Q6RVD6 105 aa5.94□□□□□ -1.46
TRERF1-204ENST00000372922 HELZ2Q9BYK8 2649 aaKnown RBP5.94□□□□□ -1.46
TRERF1-204ENST00000372922 A6NN06 94 aa5.94□□□□□ -1.46
TRERF1-204ENST00000372922 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
TRERF1-204ENST00000372922 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
TRERF1-204ENST00000372922 PRRC2CQ9Y520 2896 aaKnown RBP5.91□□□□□ -1.46
TRERF1-204ENST00000372922 KRTAP10-2P60368 255 aa5.91□□□□□ -1.46
TRERF1-204ENST00000372922 ATRQ13535 2644 aa5.91□□□□□ -1.46
TRERF1-204ENST00000372922 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
TRERF1-204ENST00000372922 KRTAP26-1Q6PEX3 210 aa5.89□□□□□ -1.47
TRERF1-204ENST00000372922 MAST4O15021 2626 aa5.88□□□□□ -1.47
TRERF1-204ENST00000372922 M0QZ58 72 aa5.87□□□□□ -1.47
TRERF1-204ENST00000372922 CFAP46Q8IYW2 2715 aa5.85□□□□□ -1.47
TRERF1-204ENST00000372922 A8MU10 97 aa5.84□□□□□ -1.47
TRERF1-204ENST00000372922 FLG2Q5D862 2391 aaPredicted RBP5.82□□□□□ -1.48
TRERF1-204ENST00000372922 DNAH12Q6ZR08 3092 aa5.82□□□□□ -1.48
TRERF1-204ENST00000372922 Q6ZR54 194 aa5.8□□□□□ -1.48
TRERF1-204ENST00000372922 PCNTO95613 3336 aa5.8□□□□□ -1.48
TRERF1-204ENST00000372922 STAB1Q9NY15 2570 aa5.78□□□□□ -1.48
TRERF1-204ENST00000372922 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
TRERF1-204ENST00000372922 PANO1I0J062 215 aa5.75□□□□□ -1.49
TRERF1-204ENST00000372922 KRTAP4-16G5E9R7 235 aaPredicted RBP5.75□□□□□ -1.49
TRERF1-204ENST00000372922 A0A087X002 238 aa5.74□□□□□ -1.49
TRERF1-204ENST00000372922 CEP350Q5VT06 3117 aa5.74□□□□□ -1.49
TRERF1-204ENST00000372922 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
TRERF1-204ENST00000372922 A8MUU9 505 aa5.73□□□□□ -1.49
TRERF1-204ENST00000372922 C5orf42Q9H799 3197 aa5.7□□□□□ -1.5
TRERF1-204ENST00000372922 TEX15Q9BXT5 2789 aa5.69□□□□□ -1.5
TRERF1-204ENST00000372922 NBEAL1Q6ZS30 2694 aa5.69□□□□□ -1.5
TRERF1-204ENST00000372922 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
TRERF1-204ENST00000372922 AKAP13Q12802 2813 aa5.68□□□□□ -1.5
TRERF1-204ENST00000372922 CHD6Q8TD26 2715 aa5.65□□□□□ -1.5
TRERF1-204ENST00000372922 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
TRERF1-204ENST00000372922 CENPEQ02224 2701 aa5.61□□□□□ -1.51
TRERF1-204ENST00000372922 TEP1Q99973 2627 aaKnown RBP5.61□□□□□ -1.51
TRERF1-204ENST00000372922 DMBT1Q9UGM3 2413 aaPredicted RBP5.61□□□□□ -1.51
TRERF1-204ENST00000372922 NOTCH2NLQ7Z3S9 236 aa5.61□□□□□ -1.51
TRERF1-204ENST00000372922 CHD7Q9P2D1 2997 aa5.6□□□□□ -1.51
TRERF1-204ENST00000372922 UNC79Q9P2D8 2635 aa5.59□□□□□ -1.51
TRERF1-204ENST00000372922 KRTAP11-1Q8IUC1 163 aa5.58□□□□□ -1.52
TRERF1-204ENST00000372922 KRTAP21-3Q3LHN1 58 aa5.57□□□□□ -1.52
TRERF1-204ENST00000372922 COL6A5A8TX70 2615 aa5.56□□□□□ -1.52
TRERF1-204ENST00000372922 SETXQ7Z333 2677 aaKnown RBP5.56□□□□□ -1.52
TRERF1-204ENST00000372922 XIRP2A4UGR9 3374 aa5.55□□□□□ -1.52
TRERF1-204ENST00000372922 KRTAP13-2Q52LG2 175 aa5.55□□□□□ -1.52
TRERF1-204ENST00000372922 BAHCC1Q9P281 2608 aa5.53□□□□□ -1.52
TRERF1-204ENST00000372922 GCN1Q92616 2671 aaKnown RBP5.52□□□□□ -1.53
TRERF1-204ENST00000372922 KRTAP13-1Q8IUC0 172 aa5.51□□□□□ -1.53
TRERF1-204ENST00000372922 KRTAP7-1Q8IUC3 87 aa5.5□□□□□ -1.53
TRERF1-204ENST00000372922 MGAQ8IWI9 3026 aa5.5□□□□□ -1.53
TRERF1-204ENST00000372922 MKI67P46013 3256 aaKnown RBP5.49□□□□□ -1.53
TRERF1-204ENST00000372922 KMT2BQ9UMN6 2715 aaPredicted RBP5.49□□□□□ -1.53
TRERF1-204ENST00000372922 A0A0C4DFX4 3053 aa5.48□□□□□ -1.53
TRERF1-204ENST00000372922 ZNF292O60281 2723 aa5.48□□□□□ -1.53
TRERF1-204ENST00000372922 CHD9Q3L8U1 2897 aa5.47□□□□□ -1.53
TRERF1-204ENST00000372922 BRCA2P51587 3418 aa5.47□□□□□ -1.53
TRERF1-204ENST00000372922 TNP1P09430 55 aa5.47□□□□□ -1.53
TRERF1-204ENST00000372922 A0A1B0GVY2 172 aa5.46□□□□□ -1.53
TRERF1-204ENST00000372922 ITPR2Q14571 2701 aa5.46□□□□□ -1.54
TRERF1-204ENST00000372922 NOTCH1P46531 2555 aa5.45□□□□□ -1.54
TRERF1-204ENST00000372922 CFAP54Q96N23 3096 aa5.45□□□□□ -1.54
TRERF1-204ENST00000372922 HTTP42858 3142 aa5.44□□□□□ -1.54
TRERF1-204ENST00000372922 STAB2Q8WWQ8 2551 aa5.43□□□□□ -1.54
TRERF1-204ENST00000372922 TRANK1O15050 2925 aa5.4□□□□□ -1.55
TRERF1-204ENST00000372922 NSD1Q96L73 2696 aaPredicted RBP5.4□□□□□ -1.55
TRERF1-204ENST00000372922 IGSF10Q6WRI0 2623 aa5.4□□□□□ -1.55
TRERF1-204ENST00000372922 CELSR3Q9NYQ7 3312 aa5.39□□□□□ -1.55
TRERF1-204ENST00000372922 NBEAL2Q6ZNJ1 2754 aa5.39□□□□□ -1.55
TRERF1-204ENST00000372922 LAMA3Q16787 3333 aa5.38□□□□□ -1.55
TRERF1-204ENST00000372922 LAMA2P24043 3122 aaKnown RBP5.38□□□□□ -1.55
TRERF1-204ENST00000372922 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
TRERF1-204ENST00000372922 KRTAP10-8P60410 259 aa5.37□□□□□ -1.55
TRERF1-204ENST00000372922 PRUNE2Q8WUY3 3088 aa5.36□□□□□ -1.55
TRERF1-204ENST00000372922 P0C880 135 aa5.34□□□□□ -1.55
TRERF1-204ENST00000372922 MAP1AP78559 2803 aaPredicted RBP5.34□□□□□ -1.55
TRERF1-204ENST00000372922 FREM2Q5SZK8 3169 aa5.34□□□□□ -1.56
TRERF1-204ENST00000372922 UBR5O95071 2799 aaPredicted RBP5.32□□□□□ -1.56
TRERF1-204ENST00000372922 CDH23Q9H251 3354 aa5.32□□□□□ -1.56
TRERF1-204ENST00000372922 DSPP15924 2871 aaKnown RBP5.31□□□□□ -1.56
TRERF1-204ENST00000372922 XP32Q5T750 250 aa5.31□□□□□ -1.56
TRERF1-204ENST00000372922 DNAH14Q0VDD8 3507 aa5.29□□□□□ -1.56
TRERF1-204ENST00000372922 FRYQ5TBA9 3013 aa5.29□□□□□ -1.56
TRERF1-204ENST00000372922 RANBP2P49792 3224 aaKnown RBP5.29□□□□□ -1.56
TRERF1-204ENST00000372922 UNC80Q8N2C7 3258 aa5.29□□□□□ -1.56
TRERF1-204ENST00000372922 WDFY4Q6ZS81 3184 aa5.28□□□□□ -1.56
TRERF1-204ENST00000372922 SZT2Q5T011 3432 aa5.27□□□□□ -1.57
TRERF1-204ENST00000372922 TRIOO75962 3097 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms