RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 hDV103S1A0JD37 113 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 IGHV3-33P01772 117 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 MGPP08493 103 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 PRB4P10163 310 aaPredicted RBP2.39□□□□□ -2.03
MCF2-203ENST00000370576 FXYD2P54710 66 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 C1orf134Q5TEV5 83 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 CDKN2A-AS1Q9UH64 79 aa2.39□□□□□ -2.03
MCF2-203ENST00000370576 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
MCF2-203ENST00000370576 COL6A5A8TX70 2615 aa2.38□□□□□ -2.03
MCF2-203ENST00000370576 PCLOQ9Y6V0 5065 aa2.38□□□□□ -2.03
MCF2-203ENST00000370576 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.38□□□□□ -2.03
MCF2-203ENST00000370576 TRAV22A0A0B4J277 110 aa2.38□□□□□ -2.03
MCF2-203ENST00000370576 IGKV2-29A2NJV5 120 aaPredicted RBP2.38□□□□□ -2.03
MCF2-203ENST00000370576 Q6ZQT0 140 aa2.38□□□□□ -2.03
MCF2-203ENST00000370576 KRTAP13-1Q8IUC0 172 aa2.38□□□□□ -2.03
MCF2-203ENST00000370576 RETNLBQ9BQ08 111 aa2.38□□□□□ -2.03
MCF2-203ENST00000370576 NBEAL1Q6ZS30 2694 aa2.38□□□□□ -2.03
MCF2-203ENST00000370576 ATRQ13535 2644 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.37□□□□□ -2.03
MCF2-203ENST00000370576 LINC00308Q8TCZ7 52 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 LOC101927531A0A1B0GV80 90 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 COX7B2Q8TF08 81 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 CYP4F30PQ9H0H9 118 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 RBM3P98179 157 aaKnown RBP2.37□□□□□ -2.03
MCF2-203ENST00000370576 DEFB135Q30KP9 77 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 KRTAP15-1Q3LI76 137 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 LINC00483Q53H64 154 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 TMEM170BQ5T4T1 132 aa2.37□□□□□ -2.03
MCF2-203ENST00000370576 A0A1B0GU33 70 aa2.36□□□□□ -2.03
MCF2-203ENST00000370576 NDUFC1O43677 76 aa2.36□□□□□ -2.03
MCF2-203ENST00000370576 C9orf129Q5T035 196 aaKnown RBP2.36□□□□□ -2.03
MCF2-203ENST00000370576 Q6ZSA8 131 aa2.36□□□□□ -2.03
MCF2-203ENST00000370576 LINC00643Q86TS7 51 aa2.36□□□□□ -2.03
MCF2-203ENST00000370576 MIR7-3HGQ8N6C7 128 aa2.36□□□□□ -2.03
MCF2-203ENST00000370576 IGKV3-7A0A075B6H7 116 aa2.36□□□□□ -2.03
MCF2-203ENST00000370576 ACYP1P07311 99 aa2.36□□□□□ -2.03
MCF2-203ENST00000370576 SMIM13P0DJ93 91 aa2.36□□□□□ -2.03
MCF2-203ENST00000370576 SLPIP03973 132 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 KRTAP1-5Q9BYS1 174 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 WNK2Q9Y3S1 2297 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
MCF2-203ENST00000370576 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 STAB1Q9NY15 2570 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 TRGV4A0A0C4DH28 118 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 SPRR1BP22528 89 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 FAM74A4Q5TZK3 123 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 KCNQ1DNQ9H478 68 aa2.35□□□□□ -2.03
MCF2-203ENST00000370576 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.34□□□□□ -2.03
MCF2-203ENST00000370576 ZNF815PA8K554 130 aa2.34□□□□□ -2.03
MCF2-203ENST00000370576 HCG22E2RYF7 251 aa2.34□□□□□ -2.03
MCF2-203ENST00000370576 H3BQ85 93 aa2.34□□□□□ -2.03
MCF2-203ENST00000370576 SLC25A20O43772 301 aa2.34□□□□□ -2.03
MCF2-203ENST00000370576 C6orf48Q9UBA6 75 aa2.34□□□□□ -2.03
MCF2-203ENST00000370576 NUPR2A6NF83 97 aa2.34□□□□□ -2.04
MCF2-203ENST00000370576 MUSTN1Q8IVN3 82 aa2.34□□□□□ -2.04
MCF2-203ENST00000370576 Q8N9P0 234 aaPredicted RBP2.34□□□□□ -2.04
MCF2-203ENST00000370576 TENM3Q9P273 2699 aa2.34□□□□□ -2.04
MCF2-203ENST00000370576 IGLV5-48A0A075B6I7 105 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 TRAV7A0A075B6U4 112 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 A0A1B0GVY2 172 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 IGLV10-54A0A075B6I4 117 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 TRGV2A0A075B6R0 118 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 Q1RN00 199 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 WFDC10BQ8IUB3 73 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 PRO1854Q9UHT4 67 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 CCL18P55774 89 aa2.33□□□□□ -2.04
MCF2-203ENST00000370576 Q8N3U1 123 aa2.32□□□□□ -2.04
MCF2-203ENST00000370576 DEFB131BA0A096LNP1 70 aa2.32□□□□□ -2.04
MCF2-203ENST00000370576 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
MCF2-203ENST00000370576 TRBV7-4A0A0J9YYF1 115 aa2.32□□□□□ -2.04
MCF2-203ENST00000370576 ERC2-IT1O76042 136 aa2.32□□□□□ -2.04
MCF2-203ENST00000370576 LOC110117498A0A087WWA1 95 aa2.31□□□□□ -2.04
MCF2-203ENST00000370576 ELOF1P60002 83 aaKnown RBP2.31□□□□□ -2.04
MCF2-203ENST00000370576 TRBV10-3A0A0K0K1G6 114 aa2.31□□□□□ -2.04
MCF2-203ENST00000370576 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
MCF2-203ENST00000370576 SPACA4Q8TDM5 124 aa2.3□□□□□ -2.04
MCF2-203ENST00000370576 PSCAO43653 123 aa2.3□□□□□ -2.04
MCF2-203ENST00000370576 NBDYA0A0U1RRE5 68 aa2.29□□□□□ -2.04
MCF2-203ENST00000370576 LCE6AA0A183 80 aa2.29□□□□□ -2.04
MCF2-203ENST00000370576 H0YGX0 51 aa2.29□□□□□ -2.04
MCF2-203ENST00000370576 NHP2Q9NX24 153 aaKnown RBP2.29□□□□□ -2.04
MCF2-203ENST00000370576 DEFB130BP0DP73 79 aa2.29□□□□□ -2.04
MCF2-203ENST00000370576 DEFB130AP0DP74 79 aa2.29□□□□□ -2.04
MCF2-203ENST00000370576 Q6JHZ5 121 aa2.29□□□□□ -2.04
MCF2-203ENST00000370576 LINC00575Q6W349 94 aa2.29□□□□□ -2.04
MCF2-203ENST00000370576 RPL37AP61513 92 aaKnown RBP2.28□□□□□ -2.04
MCF2-203ENST00000370576 SMIM11BQ8TCY0 68 aa2.28□□□□□ -2.04
MCF2-203ENST00000370576 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.05
MCF2-203ENST00000370576 ST20-AS1Q8NBB2 130 aa2.28□□□□□ -2.05
MCF2-203ENST00000370576 FAM168BA1KXE4 195 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 PRB2P02812 416 aaPredicted RBP2.27□□□□□ -2.05
MCF2-203ENST00000370576 C14orf177Q52M58 125 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 TGP01266 2768 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 MGAM2Q2M2H8 2515 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 TEX49A0A1B0GTD5 131 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 K7ERS5 55 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 SPAG11BQ08648 103 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 ATXN8Q156A1 80 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 SPRR4Q96PI1 79 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms