RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PHF5AQ7RTV0 110 aaKnown RBP10.78□□□□□ -0.68
UBE3D-203ENST00000369747 HAMPP81172 84 aa10.77□□□□□ -0.69
UBE3D-203ENST00000369747 ATP5EP2Q5VTU8 51 aa10.77□□□□□ -0.69
UBE3D-203ENST00000369747 KRTAP11-1Q8IUC1 163 aa10.76□□□□□ -0.69
UBE3D-203ENST00000369747 C3orf22Q8N5N4 141 aa10.76□□□□□ -0.69
UBE3D-203ENST00000369747 Q6ZVQ6 151 aa10.75□□□□□ -0.69
UBE3D-203ENST00000369747 HIST1H4AP62805 103 aaKnown RBP10.74□□□□□ -0.69
UBE3D-203ENST00000369747 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
UBE3D-203ENST00000369747 CIRBP-AS1Q8TBR5 109 aa10.74□□□□□ -0.69
UBE3D-203ENST00000369747 PRLHP81277 87 aa10.74□□□□□ -0.69
UBE3D-203ENST00000369747 PLAC8Q9NZF1 115 aa10.74□□□□□ -0.69
UBE3D-203ENST00000369747 A0A087WVE0 104 aa10.73□□□□□ -0.69
UBE3D-203ENST00000369747 SCXQ7RTU7 201 aa10.73□□□□□ -0.69
UBE3D-203ENST00000369747 APOBP04114 4563 aaKnown RBP10.73□□□□□ -0.69
UBE3D-203ENST00000369747 EPM2AB3EWF7 344 aa10.72□□□□□ -0.69
UBE3D-203ENST00000369747 CCDC179H3BU77 68 aa10.68□□□□□ -0.7
UBE3D-203ENST00000369747 SMIM29Q86T20 159 aa10.68□□□□□ -0.7
UBE3D-203ENST00000369747 HIGD2AQ9BW72 106 aa10.67□□□□□ -0.7
UBE3D-203ENST00000369747 SRRM2Q9UQ35 2752 aaKnown RBP10.67□□□□□ -0.7
UBE3D-203ENST00000369747 H0Y9J4 135 aa10.66□□□□□ -0.7
UBE3D-203ENST00000369747 C1orf137Q5JT78 98 aa10.66□□□□□ -0.7
UBE3D-203ENST00000369747 A0A1W2PNM2 257 aa10.64□□□□□ -0.71
UBE3D-203ENST00000369747 CXCL6P80162 114 aa10.64□□□□□ -0.71
UBE3D-203ENST00000369747 ATOX1O00244 68 aa10.63□□□□□ -0.71
UBE3D-203ENST00000369747 Q8NBF4 154 aa10.6□□□□□ -0.71
UBE3D-203ENST00000369747 KIAA1109Q2LD37 5005 aa10.6□□□□□ -0.71
UBE3D-203ENST00000369747 FAT1Q14517 4588 aa10.6□□□□□ -0.71
UBE3D-203ENST00000369747 UBE2AP49459 152 aa10.6□□□□□ -0.71
UBE3D-203ENST00000369747 A0A1B0GW54 56 aa10.59□□□□□ -0.71
UBE3D-203ENST00000369747 BCE1O60756 84 aa10.59□□□□□ -0.71
UBE3D-203ENST00000369747 KRTAP13-1Q8IUC0 172 aa10.59□□□□□ -0.71
UBE3D-203ENST00000369747 VPS13BQ7Z7G8 4022 aa10.58□□□□□ -0.71
UBE3D-203ENST00000369747 F8WEM9 126 aa10.58□□□□□ -0.72
UBE3D-203ENST00000369747 NREPQ16612 68 aa10.58□□□□□ -0.72
UBE3D-203ENST00000369747 SPRR4Q96PI1 79 aa10.58□□□□□ -0.72
UBE3D-203ENST00000369747 PSORS1C2Q9UIG4 136 aa10.57□□□□□ -0.72
UBE3D-203ENST00000369747 IGLV8-61A0A075B6I0 122 aa10.56□□□□□ -0.72
UBE3D-203ENST00000369747 SMR3BP02814 79 aaPredicted RBP10.56□□□□□ -0.72
UBE3D-203ENST00000369747 RYR1P21817 5038 aa10.56□□□□□ -0.72
UBE3D-203ENST00000369747 HSPG2P98160 4391 aa10.56□□□□□ -0.72
UBE3D-203ENST00000369747 SPRR1BP22528 89 aa10.56□□□□□ -0.72
UBE3D-203ENST00000369747 COX7CP15954 63 aa10.55□□□□□ -0.72
UBE3D-203ENST00000369747 IGFL1Q6UW32 110 aa10.55□□□□□ -0.72
UBE3D-203ENST00000369747 UQCRQO14949 82 aa10.54□□□□□ -0.72
UBE3D-203ENST00000369747 A0A0G2JQZ4 141 aa10.54□□□□□ -0.72
UBE3D-203ENST00000369747 CDK2AP2O75956 126 aa10.52□□□□□ -0.73
UBE3D-203ENST00000369747 CRYGAP11844 174 aa10.52□□□□□ -0.73
UBE3D-203ENST00000369747 SERP2Q8N6R1 65 aa10.52□□□□□ -0.73
UBE3D-203ENST00000369747 BPY2O14599 106 aa10.5□□□□□ -0.73
UBE3D-203ENST00000369747 Q8N9L7 120 aa10.49□□□□□ -0.73
UBE3D-203ENST00000369747 IGKV4-1P06312 121 aa10.48□□□□□ -0.73
UBE3D-203ENST00000369747 C9orf153Q5TBE3 101 aa10.47□□□□□ -0.73
UBE3D-203ENST00000369747 BIRC6Q9NR09 4857 aa10.44□□□□□ -0.74
UBE3D-203ENST00000369747 IGLV7-43P04211 117 aa10.44□□□□□ -0.74
UBE3D-203ENST00000369747 RPL37AP61513 92 aaKnown RBP10.43□□□□□ -0.74
UBE3D-203ENST00000369747 KRTAP17-1Q9BYP8 105 aa10.43□□□□□ -0.74
UBE3D-203ENST00000369747 A0A087WSZ3 146 aa10.41□□□□□ -0.74
UBE3D-203ENST00000369747 ZNF861PO60384 105 aa10.41□□□□□ -0.74
UBE3D-203ENST00000369747 DSCR10P59022 87 aa10.4□□□□□ -0.74
UBE3D-203ENST00000369747 KRTAP10-4P60372 401 aaPredicted RBP10.4□□□□□ -0.74
UBE3D-203ENST00000369747 LINC00483Q53H64 154 aa10.4□□□□□ -0.74
UBE3D-203ENST00000369747 SS18L2Q9UHA2 77 aa10.4□□□□□ -0.74
UBE3D-203ENST00000369747 TRAV7A0A075B6U4 112 aa10.39□□□□□ -0.75
UBE3D-203ENST00000369747 CYSTM1Q9H1C7 97 aa10.38□□□□□ -0.75
UBE3D-203ENST00000369747 SMIM20Q8N5G0 67 aa10.37□□□□□ -0.75
UBE3D-203ENST00000369747 FAM229AH3BQW9 127 aa10.36□□□□□ -0.75
UBE3D-203ENST00000369747 ZNF706Q9Y5V0 76 aaPredicted RBP10.36□□□□□ -0.75
UBE3D-203ENST00000369747 Q5VSD8 79 aa10.35□□□□□ -0.75
UBE3D-203ENST00000369747 K7EQZ3 153 aa10.35□□□□□ -0.75
UBE3D-203ENST00000369747 IGLV9-49A0A0B4J1Y8 123 aa10.34□□□□□ -0.75
UBE3D-203ENST00000369747 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
UBE3D-203ENST00000369747 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
UBE3D-203ENST00000369747 Q8N1X5 172 aa10.31□□□□□ -0.76
UBE3D-203ENST00000369747 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
UBE3D-203ENST00000369747 ANAPC11Q9NYG5 84 aa10.29□□□□□ -0.76
UBE3D-203ENST00000369747 OCR1Q9BZK8 76 aa10.27□□□□□ -0.76
UBE3D-203ENST00000369747 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.76
UBE3D-203ENST00000369747 HERC2O95714 4834 aa10.26□□□□□ -0.77
UBE3D-203ENST00000369747 SPINK6Q6UWN8 80 aa10.26□□□□□ -0.77
UBE3D-203ENST00000369747 MOBPQ13875 183 aa10.25□□□□□ -0.77
UBE3D-203ENST00000369747 HCG22E2RYF7 251 aa10.23□□□□□ -0.77
UBE3D-203ENST00000369747 KLKP1Q107X0 134 aa10.22□□□□□ -0.77
UBE3D-203ENST00000369747 KRTAP4-5Q9BYR2 181 aa10.22□□□□□ -0.77
UBE3D-203ENST00000369747 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.78
UBE3D-203ENST00000369747 HRCT1Q6UXD1 115 aa10.21□□□□□ -0.78
UBE3D-203ENST00000369747 MYCBP2O75592 4640 aa10.2□□□□□ -0.78
UBE3D-203ENST00000369747 LRP1Q07954 4544 aaKnown RBP10.2□□□□□ -0.78
UBE3D-203ENST00000369747 TMEM258P61165 79 aa10.19□□□□□ -0.78
UBE3D-203ENST00000369747 SNURFQ9Y675 71 aa10.19□□□□□ -0.78
UBE3D-203ENST00000369747 PKHD1L1Q86WI1 4243 aa10.19□□□□□ -0.78
UBE3D-203ENST00000369747 A8MWP4 228 aa10.19□□□□□ -0.78
UBE3D-203ENST00000369747 Q96NJ1 140 aa10.19□□□□□ -0.78
UBE3D-203ENST00000369747 PRR15Q8IV56 129 aa10.18□□□□□ -0.78
UBE3D-203ENST00000369747 FLG2Q5D862 2391 aaPredicted RBP10.17□□□□□ -0.78
UBE3D-203ENST00000369747 ABCA13Q86UQ4 5058 aa10.17□□□□□ -0.78
UBE3D-203ENST00000369747 TMEM254Q8TBM7 123 aa10.16□□□□□ -0.78
UBE3D-203ENST00000369747 A0A087X002 238 aa10.15□□□□□ -0.78
UBE3D-203ENST00000369747 H7BZZ5 65 aa10.15□□□□□ -0.78
UBE3D-203ENST00000369747 WFDC13Q8IUB5 93 aa10.15□□□□□ -0.78
UBE3D-203ENST00000369747 J3KT08 172 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms