RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 LOC110117498A0A087WWA1 95 aa10.27□□□□□ -0.76
PHGDH-202ENST00000369409 CCKP06307 115 aa10.27□□□□□ -0.76
PHGDH-202ENST00000369409 Q6Q795 121 aa10.27□□□□□ -0.77
PHGDH-202ENST00000369409 TRBV7-4A0A0J9YYF1 115 aa10.26□□□□□ -0.77
PHGDH-202ENST00000369409 XGP55808 180 aa10.26□□□□□ -0.77
PHGDH-202ENST00000369409 SMIM29Q86T20 159 aa10.26□□□□□ -0.77
PHGDH-202ENST00000369409 DYNC1H1Q14204 4646 aaKnown RBP10.26□□□□□ -0.77
PHGDH-202ENST00000369409 ACYP1P07311 99 aa10.25□□□□□ -0.77
PHGDH-202ENST00000369409 ZNF861PO60384 105 aa10.25□□□□□ -0.77
PHGDH-202ENST00000369409 IGLV7-43P04211 117 aa10.24□□□□□ -0.77
PHGDH-202ENST00000369409 SS18L2Q9UHA2 77 aa10.24□□□□□ -0.77
PHGDH-202ENST00000369409 PDE6GP18545 87 aa10.23□□□□□ -0.77
PHGDH-202ENST00000369409 F8WEM9 126 aa10.22□□□□□ -0.77
PHGDH-202ENST00000369409 SPRR1BP22528 89 aa10.22□□□□□ -0.77
PHGDH-202ENST00000369409 RYR3Q15413 4870 aa10.21□□□□□ -0.77
PHGDH-202ENST00000369409 SPRR4Q96PI1 79 aa10.2□□□□□ -0.78
PHGDH-202ENST00000369409 LINC00846Q9NV44 126 aa10.19□□□□□ -0.78
PHGDH-202ENST00000369409 ZNF706Q9Y5V0 76 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-202ENST00000369409 APOBP04114 4563 aaKnown RBP10.15□□□□□ -0.78
PHGDH-202ENST00000369409 LINC00483Q53H64 154 aa10.15□□□□□ -0.79
PHGDH-202ENST00000369409 IGLV8-61A0A075B6I0 122 aa10.13□□□□□ -0.79
PHGDH-202ENST00000369409 A0A0G2JQZ4 141 aa10.13□□□□□ -0.79
PHGDH-202ENST00000369409 IGFL1Q6UW32 110 aa10.13□□□□□ -0.79
PHGDH-202ENST00000369409 A0A1W2PNM2 257 aa10.12□□□□□ -0.79
PHGDH-202ENST00000369409 VPS13BQ7Z7G8 4022 aa10.12□□□□□ -0.79
PHGDH-202ENST00000369409 LINC00643Q86TS7 51 aa10.1□□□□□ -0.79
PHGDH-202ENST00000369409 Q8NBF4 154 aa10.1□□□□□ -0.79
PHGDH-202ENST00000369409 ANAPC11Q9NYG5 84 aa10.1□□□□□ -0.79
PHGDH-202ENST00000369409 IGLV9-49A0A0B4J1Y8 123 aa10.1□□□□□ -0.79
PHGDH-202ENST00000369409 SMIM20Q8N5G0 67 aa10.1□□□□□ -0.79
PHGDH-202ENST00000369409 SMR3BP02814 79 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-202ENST00000369409 C9orf153Q5TBE3 101 aa10.08□□□□□ -0.8
PHGDH-202ENST00000369409 UBL5Q9BZL1 73 aa10.08□□□□□ -0.8
PHGDH-202ENST00000369409 RPL37AP61513 92 aaKnown RBP10.08□□□□□ -0.8
PHGDH-202ENST00000369409 Q6JHZ5 121 aa10.07□□□□□ -0.8
PHGDH-202ENST00000369409 Q6ZVQ6 151 aa10.06□□□□□ -0.8
PHGDH-202ENST00000369409 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
PHGDH-202ENST00000369409 IMUPQ9GZP8 106 aa10.04□□□□□ -0.8
PHGDH-202ENST00000369409 MOBPQ13875 183 aa10.04□□□□□ -0.8
PHGDH-202ENST00000369409 IGKV3D-7A0A0C4DH55 119 aa10.02□□□□□ -0.8
PHGDH-202ENST00000369409 CRYGAP11844 174 aa10.02□□□□□ -0.8
PHGDH-202ENST00000369409 A0A1B0GW54 56 aa10.02□□□□□ -0.81
PHGDH-202ENST00000369409 TRBV7-7A0A0K0K1E9 115 aa10□□□□□ -0.81
PHGDH-202ENST00000369409 FAT1Q14517 4588 aa9.99□□□□□ -0.81
PHGDH-202ENST00000369409 NREPQ16612 68 aa9.98□□□□□ -0.81
PHGDH-202ENST00000369409 ATP5EP2Q5VTU8 51 aa9.98□□□□□ -0.81
PHGDH-202ENST00000369409 A0A087WSZ3 146 aa9.98□□□□□ -0.81
PHGDH-202ENST00000369409 KRTAP1-4P0C5Y4 121 aa9.96□□□□□ -0.81
PHGDH-202ENST00000369409 A0A087X002 238 aa9.96□□□□□ -0.82
PHGDH-202ENST00000369409 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
PHGDH-202ENST00000369409 KRTAP10-4P60372 401 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-202ENST00000369409 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
PHGDH-202ENST00000369409 FAM229BQ4G0N7 80 aa9.93□□□□□ -0.82
PHGDH-202ENST00000369409 HRCT1Q6UXD1 115 aa9.93□□□□□ -0.82
PHGDH-202ENST00000369409 UQCRQO14949 82 aa9.92□□□□□ -0.82
PHGDH-202ENST00000369409 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
PHGDH-202ENST00000369409 CXCL6P80162 114 aa9.91□□□□□ -0.82
PHGDH-202ENST00000369409 CDK2AP2O75956 126 aa9.91□□□□□ -0.82
PHGDH-202ENST00000369409 HSPG2P98160 4391 aa9.9□□□□□ -0.82
PHGDH-202ENST00000369409 HIST1H4AP62805 103 aaKnown RBP9.9□□□□□ -0.82
PHGDH-202ENST00000369409 J3KT08 172 aa9.89□□□□□ -0.83
PHGDH-202ENST00000369409 BPY2O14599 106 aa9.89□□□□□ -0.83
PHGDH-202ENST00000369409 RPS28P62857 69 aaKnown RBP9.89□□□□□ -0.83
PHGDH-202ENST00000369409 A0A087WVE0 104 aa9.88□□□□□ -0.83
PHGDH-202ENST00000369409 PLA2G1BP04054 148 aaKnown RBP9.88□□□□□ -0.83
PHGDH-202ENST00000369409 SSBP3-AS1Q7Z2R9 100 aa9.88□□□□□ -0.83
PHGDH-202ENST00000369409 FAM229AH3BQW9 127 aa9.85□□□□□ -0.83
PHGDH-202ENST00000369409 Q8N9L7 120 aa9.85□□□□□ -0.83
PHGDH-202ENST00000369409 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
PHGDH-202ENST00000369409 FAM236AA0A1B0GUQ0 79 aa9.84□□□□□ -0.83
PHGDH-202ENST00000369409 FAM236BA0A1B0GV22 79 aa9.84□□□□□ -0.83
PHGDH-202ENST00000369409 DEFB116Q30KQ4 102 aa9.84□□□□□ -0.83
PHGDH-202ENST00000369409 RYR1P21817 5038 aa9.84□□□□□ -0.83
PHGDH-202ENST00000369409 PKHD1L1Q86WI1 4243 aa9.83□□□□□ -0.84
PHGDH-202ENST00000369409 Q5VSD8 79 aa9.83□□□□□ -0.84
PHGDH-202ENST00000369409 CD164Q04900 197 aa9.81□□□□□ -0.84
PHGDH-202ENST00000369409 ATOX1O00244 68 aa9.81□□□□□ -0.84
PHGDH-202ENST00000369409 COX7CP15954 63 aa9.81□□□□□ -0.84
PHGDH-202ENST00000369409 TYMSOSQ8TAI1 123 aa9.81□□□□□ -0.84
PHGDH-202ENST00000369409 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
PHGDH-202ENST00000369409 DSCR10P59022 87 aa9.8□□□□□ -0.84
PHGDH-202ENST00000369409 PRR26Q8N8Z3 221 aa9.8□□□□□ -0.84
PHGDH-202ENST00000369409 LINC00472Q9H8W2 130 aa9.8□□□□□ -0.84
PHGDH-202ENST00000369409 Q96NJ1 140 aa9.77□□□□□ -0.85
PHGDH-202ENST00000369409 KIAA1109Q2LD37 5005 aa9.77□□□□□ -0.85
PHGDH-202ENST00000369409 K7EQZ3 153 aa9.76□□□□□ -0.85
PHGDH-202ENST00000369409 TMEM258P61165 79 aa9.74□□□□□ -0.85
PHGDH-202ENST00000369409 KRTAP17-1Q9BYP8 105 aa9.74□□□□□ -0.85
PHGDH-202ENST00000369409 A8MWP4 228 aa9.7□□□□□ -0.86
PHGDH-202ENST00000369409 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
PHGDH-202ENST00000369409 LINC00304Q8N9R0 145 aa9.69□□□□□ -0.86
PHGDH-202ENST00000369409 Q8N1X5 172 aa9.68□□□□□ -0.86
PHGDH-202ENST00000369409 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
PHGDH-202ENST00000369409 LIMD2Q9BT23 127 aa9.67□□□□□ -0.86
PHGDH-202ENST00000369409 Q5XG85 94 aa9.66□□□□□ -0.86
PHGDH-202ENST00000369409 PRR15Q8IV56 129 aa9.66□□□□□ -0.86
PHGDH-202ENST00000369409 SPINK1P00995 79 aa9.66□□□□□ -0.86
PHGDH-202ENST00000369409 SERP2Q8N6R1 65 aa9.65□□□□□ -0.86
PHGDH-202ENST00000369409 NDUFB1O75438 58 aa9.64□□□□□ -0.87
PHGDH-202ENST00000369409 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms