RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 STAB1Q9NY15 2570 aa6.24□□□□□ -1.41
SIM1-202ENST00000369208 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
SIM1-202ENST00000369208 Q8N1X5 172 aa6.23□□□□□ -1.41
SIM1-202ENST00000369208 LINC00472Q9H8W2 130 aa6.23□□□□□ -1.41
SIM1-202ENST00000369208 PLAC8Q9NZF1 115 aa6.23□□□□□ -1.41
SIM1-202ENST00000369208 ITPR3Q14573 2671 aa6.22□□□□□ -1.41
SIM1-202ENST00000369208 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.42
SIM1-202ENST00000369208 PRRC2CQ9Y520 2896 aaKnown RBP6.19□□□□□ -1.42
SIM1-202ENST00000369208 S4R3F8 94 aa6.19□□□□□ -1.42
SIM1-202ENST00000369208 BPTFQ12830 3046 aa6.18□□□□□ -1.42
SIM1-202ENST00000369208 SPRR1AP35321 89 aa6.18□□□□□ -1.42
SIM1-202ENST00000369208 Q5VSD8 79 aa6.18□□□□□ -1.42
SIM1-202ENST00000369208 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
SIM1-202ENST00000369208 KRTAP29-1A8MX34 341 aaPredicted RBP6.16□□□□□ -1.42
SIM1-202ENST00000369208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.16□□□□□ -1.42
SIM1-202ENST00000369208 CENPEQ02224 2701 aa6.15□□□□□ -1.42
SIM1-202ENST00000369208 CFAP46Q8IYW2 2715 aa6.15□□□□□ -1.42
SIM1-202ENST00000369208 SPRR1BP22528 89 aa6.15□□□□□ -1.43
SIM1-202ENST00000369208 Q5W150 140 aa6.15□□□□□ -1.43
SIM1-202ENST00000369208 EP400Q96L91 3159 aa6.14□□□□□ -1.43
SIM1-202ENST00000369208 A0A0G2JQZ4 141 aa6.14□□□□□ -1.43
SIM1-202ENST00000369208 CENPFP49454 3210 aa6.13□□□□□ -1.43
SIM1-202ENST00000369208 R4GN34 69 aa6.1□□□□□ -1.43
SIM1-202ENST00000369208 ADM2Q7Z4H4 148 aa6.08□□□□□ -1.44
SIM1-202ENST00000369208 PANO1I0J062 215 aa6.07□□□□□ -1.44
SIM1-202ENST00000369208 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
SIM1-202ENST00000369208 A8MUU9 505 aa6.06□□□□□ -1.44
SIM1-202ENST00000369208 GOLGB1Q14789 3259 aaKnown RBP6.02□□□□□ -1.44
SIM1-202ENST00000369208 KRTAP26-1Q6PEX3 210 aa6.02□□□□□ -1.45
SIM1-202ENST00000369208 SETXQ7Z333 2677 aaKnown RBP6□□□□□ -1.45
SIM1-202ENST00000369208 A8MU10 97 aa6□□□□□ -1.45
SIM1-202ENST00000369208 NBEAL1Q6ZS30 2694 aa5.99□□□□□ -1.45
SIM1-202ENST00000369208 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
SIM1-202ENST00000369208 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
SIM1-202ENST00000369208 Q8NDZ9 215 aa5.97□□□□□ -1.45
SIM1-202ENST00000369208 TEP1Q99973 2627 aaKnown RBP5.96□□□□□ -1.46
SIM1-202ENST00000369208 TEX15Q9BXT5 2789 aa5.95□□□□□ -1.46
SIM1-202ENST00000369208 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
SIM1-202ENST00000369208 BAHCC1Q9P281 2608 aa5.95□□□□□ -1.46
SIM1-202ENST00000369208 KRTAP21-3Q3LHN1 58 aa5.94□□□□□ -1.46
SIM1-202ENST00000369208 M0QZ58 72 aa5.92□□□□□ -1.46
SIM1-202ENST00000369208 KRTAP4-16G5E9R7 235 aaPredicted RBP5.91□□□□□ -1.46
SIM1-202ENST00000369208 AKAP13Q12802 2813 aa5.91□□□□□ -1.46
SIM1-202ENST00000369208 UNC79Q9P2D8 2635 aa5.9□□□□□ -1.46
SIM1-202ENST00000369208 RPS29P62273 56 aaKnown RBP5.9□□□□□ -1.46
SIM1-202ENST00000369208 KMT2BQ9UMN6 2715 aaPredicted RBP5.89□□□□□ -1.47
SIM1-202ENST00000369208 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
SIM1-202ENST00000369208 A0A0C4DFX4 3053 aa5.88□□□□□ -1.47
SIM1-202ENST00000369208 COL6A5A8TX70 2615 aa5.88□□□□□ -1.47
SIM1-202ENST00000369208 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
SIM1-202ENST00000369208 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
SIM1-202ENST00000369208 UTRNP46939 3433 aa5.82□□□□□ -1.48
SIM1-202ENST00000369208 CHD6Q8TD26 2715 aa5.8□□□□□ -1.48
SIM1-202ENST00000369208 NOTCH1P46531 2555 aa5.79□□□□□ -1.48
SIM1-202ENST00000369208 GCN1Q92616 2671 aaKnown RBP5.78□□□□□ -1.48
SIM1-202ENST00000369208 STAB2Q8WWQ8 2551 aa5.76□□□□□ -1.49
SIM1-202ENST00000369208 ITPR1Q14643 2758 aa5.75□□□□□ -1.49
SIM1-202ENST00000369208 P0C880 135 aa5.75□□□□□ -1.49
SIM1-202ENST00000369208 ITPR2Q14571 2701 aa5.74□□□□□ -1.49
SIM1-202ENST00000369208 NSD1Q96L73 2696 aaPredicted RBP5.71□□□□□ -1.5
SIM1-202ENST00000369208 ZNF292O60281 2723 aa5.7□□□□□ -1.5
SIM1-202ENST00000369208 APCP25054 2843 aa5.65□□□□□ -1.5
SIM1-202ENST00000369208 H0YAA0 97 aa5.65□□□□□ -1.51
SIM1-202ENST00000369208 MAP1AP78559 2803 aaPredicted RBP5.63□□□□□ -1.51
SIM1-202ENST00000369208 DNAH12Q6ZR08 3092 aa5.63□□□□□ -1.51
SIM1-202ENST00000369208 PCNTO95613 3336 aa5.62□□□□□ -1.51
SIM1-202ENST00000369208 Q6ZRN7 208 aaPredicted RBP5.62□□□□□ -1.51
SIM1-202ENST00000369208 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
SIM1-202ENST00000369208 IGSF10Q6WRI0 2623 aa5.59□□□□□ -1.51
SIM1-202ENST00000369208 CEP350Q5VT06 3117 aa5.57□□□□□ -1.52
SIM1-202ENST00000369208 TNP1P09430 55 aa5.56□□□□□ -1.52
SIM1-202ENST00000369208 MGAQ8IWI9 3026 aa5.55□□□□□ -1.52
SIM1-202ENST00000369208 CFAP54Q96N23 3096 aa5.53□□□□□ -1.52
SIM1-202ENST00000369208 C5orf42Q9H799 3197 aa5.52□□□□□ -1.53
SIM1-202ENST00000369208 ZFHX3Q15911 3703 aa5.5□□□□□ -1.53
SIM1-202ENST00000369208 DSPP15924 2871 aaKnown RBP5.49□□□□□ -1.53
SIM1-202ENST00000369208 INE1O15225 51 aa5.49□□□□□ -1.53
SIM1-202ENST00000369208 UBR5O95071 2799 aaPredicted RBP5.49□□□□□ -1.53
SIM1-202ENST00000369208 XIRP2A4UGR9 3374 aa5.49□□□□□ -1.53
SIM1-202ENST00000369208 KRTAP13-2Q52LG2 175 aa5.49□□□□□ -1.53
SIM1-202ENST00000369208 LRBAP50851 2863 aa5.48□□□□□ -1.53
SIM1-202ENST00000369208 KRTAP13-1Q8IUC0 172 aa5.46□□□□□ -1.53
SIM1-202ENST00000369208 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
SIM1-202ENST00000369208 UTP20O75691 2785 aaKnown RBP5.42□□□□□ -1.54
SIM1-202ENST00000369208 TRANK1O15050 2925 aa5.42□□□□□ -1.54
SIM1-202ENST00000369208 TPRXLQ17RH7 258 aa5.41□□□□□ -1.54
SIM1-202ENST00000369208 NBEAL2Q6ZNJ1 2754 aa5.4□□□□□ -1.54
SIM1-202ENST00000369208 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
SIM1-202ENST00000369208 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
SIM1-202ENST00000369208 XP32Q5T750 250 aa5.34□□□□□ -1.55
SIM1-202ENST00000369208 CHD7Q9P2D1 2997 aa5.33□□□□□ -1.56
SIM1-202ENST00000369208 LAMA2P24043 3122 aaKnown RBP5.32□□□□□ -1.56
SIM1-202ENST00000369208 FRYQ5TBA9 3013 aa5.32□□□□□ -1.56
SIM1-202ENST00000369208 KRTAP7-1Q8IUC3 87 aa5.32□□□□□ -1.56
SIM1-202ENST00000369208 FLNCQ14315 2725 aa5.31□□□□□ -1.56
SIM1-202ENST00000369208 TENM4Q6N022 2769 aa5.31□□□□□ -1.56
SIM1-202ENST00000369208 KALRNO60229 2985 aa5.3□□□□□ -1.56
SIM1-202ENST00000369208 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
SIM1-202ENST00000369208 HIVEP1P15822 2718 aa5.3□□□□□ -1.56
SIM1-202ENST00000369208 KRTAP13-3Q3SY46 172 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms