RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SPANXA2-OT1Q8N9U9 137 aa11.09□□□□□ -0.63
CHTOP-203ENST00000368690 FAM168BA1KXE4 195 aa11.08□□□□□ -0.64
CHTOP-203ENST00000368690 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
CHTOP-203ENST00000368690 KRTAP7-1Q8IUC3 87 aa11.08□□□□□ -0.64
CHTOP-203ENST00000368690 IGLV8-61A0A075B6I0 122 aa11.07□□□□□ -0.64
CHTOP-203ENST00000368690 UBE2BP63146 152 aa11.07□□□□□ -0.64
CHTOP-203ENST00000368690 PSPHP1O15172 72 aa11.06□□□□□ -0.64
CHTOP-203ENST00000368690 B9D2Q9BPU9 175 aa11.05□□□□□ -0.64
CHTOP-203ENST00000368690 DNHD1Q96M86 4753 aa11.05□□□□□ -0.64
CHTOP-203ENST00000368690 IGFL1Q6UW32 110 aa11.04□□□□□ -0.64
CHTOP-203ENST00000368690 REG3GQ6UW15 175 aa11.04□□□□□ -0.64
CHTOP-203ENST00000368690 DEFB131BA0A096LNP1 70 aa11.03□□□□□ -0.64
CHTOP-203ENST00000368690 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
CHTOP-203ENST00000368690 COL7A1Q02388 2944 aa11.03□□□□□ -0.64
CHTOP-203ENST00000368690 PRR4Q16378 134 aa11.01□□□□□ -0.65
CHTOP-203ENST00000368690 LINC00588Q9Y4M8 146 aa11.01□□□□□ -0.65
CHTOP-203ENST00000368690 WFDC13Q8IUB5 93 aa11□□□□□ -0.65
CHTOP-203ENST00000368690 A8MUN3 132 aa10.99□□□□□ -0.65
CHTOP-203ENST00000368690 KRTAP21-3Q3LHN1 58 aa10.99□□□□□ -0.65
CHTOP-203ENST00000368690 LINC00208Q96KT6 92 aa10.99□□□□□ -0.65
CHTOP-203ENST00000368690 HUWE1Q7Z6Z7 4374 aaKnown RBP10.98□□□□□ -0.65
CHTOP-203ENST00000368690 LIMD2Q9BT23 127 aa10.98□□□□□ -0.65
CHTOP-203ENST00000368690 Q5VV11 94 aa10.97□□□□□ -0.65
CHTOP-203ENST00000368690 STAB2Q8WWQ8 2551 aa10.97□□□□□ -0.65
CHTOP-203ENST00000368690 MEGF8Q7Z7M0 2845 aa10.97□□□□□ -0.65
CHTOP-203ENST00000368690 A0A087WSZ3 146 aa10.96□□□□□ -0.66
CHTOP-203ENST00000368690 H0Y9P7 68 aa10.95□□□□□ -0.66
CHTOP-203ENST00000368690 Q8N9P0 234 aaPredicted RBP10.94□□□□□ -0.66
CHTOP-203ENST00000368690 CASC2Q6XLA1 102 aa10.93□□□□□ -0.66
CHTOP-203ENST00000368690 UBE2AP49459 152 aa10.93□□□□□ -0.66
CHTOP-203ENST00000368690 DEFB116Q30KQ4 102 aa10.93□□□□□ -0.66
CHTOP-203ENST00000368690 CASC10Q5T4H9 136 aa10.92□□□□□ -0.66
CHTOP-203ENST00000368690 A0A0G2JQZ4 141 aa10.91□□□□□ -0.66
CHTOP-203ENST00000368690 A0A1W2PNN7 141 aa10.91□□□□□ -0.66
CHTOP-203ENST00000368690 C9orf163Q8N9P6 203 aa10.91□□□□□ -0.66
CHTOP-203ENST00000368690 A8MWP4 228 aa10.9□□□□□ -0.66
CHTOP-203ENST00000368690 CNBPP62633 177 aaKnown RBP10.89□□□□□ -0.67
CHTOP-203ENST00000368690 DNAH9Q9NYC9 4486 aa10.88□□□□□ -0.67
CHTOP-203ENST00000368690 RPL37AP61513 92 aaKnown RBP10.88□□□□□ -0.67
CHTOP-203ENST00000368690 SPRR1BP22528 89 aa10.87□□□□□ -0.67
CHTOP-203ENST00000368690 PRKDCP78527 4128 aaKnown RBP10.86□□□□□ -0.67
CHTOP-203ENST00000368690 LINC00472Q9H8W2 130 aa10.86□□□□□ -0.67
CHTOP-203ENST00000368690 CHKB-CPT1BH3BT56 60 aa10.85□□□□□ -0.67
CHTOP-203ENST00000368690 Q75L30 129 aa10.84□□□□□ -0.67
CHTOP-203ENST00000368690 LOC101927531A0A1B0GV80 90 aa10.84□□□□□ -0.67
CHTOP-203ENST00000368690 PRLHP81277 87 aa10.84□□□□□ -0.67
CHTOP-203ENST00000368690 CD164Q04900 197 aa10.83□□□□□ -0.68
CHTOP-203ENST00000368690 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
CHTOP-203ENST00000368690 C16orf90A8MZG2 172 aa10.83□□□□□ -0.68
CHTOP-203ENST00000368690 H0Y9J4 135 aa10.83□□□□□ -0.68
CHTOP-203ENST00000368690 PRR15LQ9BU68 103 aa10.82□□□□□ -0.68
CHTOP-203ENST00000368690 ATP11AUNQ6ZP68 121 aa10.79□□□□□ -0.68
CHTOP-203ENST00000368690 A0A096LNI7 61 aa10.78□□□□□ -0.68
CHTOP-203ENST00000368690 A8MU10 97 aa10.78□□□□□ -0.68
CHTOP-203ENST00000368690 COA5Q86WW8 74 aa10.78□□□□□ -0.68
CHTOP-203ENST00000368690 MMP24-AS1A0A0U1RRL7 71 aa10.77□□□□□ -0.69
CHTOP-203ENST00000368690 KTN1-AS1Q86SY8 53 aa10.76□□□□□ -0.69
CHTOP-203ENST00000368690 FBN3Q75N90 2809 aa10.75□□□□□ -0.69
CHTOP-203ENST00000368690 CSMD3Q7Z407 3707 aa10.75□□□□□ -0.69
CHTOP-203ENST00000368690 LYSTQ99698 3801 aa10.75□□□□□ -0.69
CHTOP-203ENST00000368690 TP53AIP1Q9HCN2 124 aa10.75□□□□□ -0.69
CHTOP-203ENST00000368690 NUPR2A6NF83 97 aa10.73□□□□□ -0.69
CHTOP-203ENST00000368690 ASB16-AS1Q495Z4 193 aa10.73□□□□□ -0.69
CHTOP-203ENST00000368690 UBE2DNLQ8IWF7 75 aa10.73□□□□□ -0.69
CHTOP-203ENST00000368690 TENM2Q9NT68 2774 aa10.73□□□□□ -0.69
CHTOP-203ENST00000368690 DNAH1Q9P2D7 4330 aa10.72□□□□□ -0.69
CHTOP-203ENST00000368690 LCA10Q71F78 164 aa10.72□□□□□ -0.69
CHTOP-203ENST00000368690 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
CHTOP-203ENST00000368690 APLNQ9ULZ1 77 aa10.7□□□□□ -0.7
CHTOP-203ENST00000368690 CDC42SE1Q9NRR8 79 aa10.7□□□□□ -0.7
CHTOP-203ENST00000368690 LINC01558Q9Y6Z2 57 aa10.7□□□□□ -0.7
CHTOP-203ENST00000368690 TGP01266 2768 aa10.7□□□□□ -0.7
CHTOP-203ENST00000368690 A6NED7 52 aa10.69□□□□□ -0.7
CHTOP-203ENST00000368690 NDUFS5O43920 106 aa10.69□□□□□ -0.7
CHTOP-203ENST00000368690 PLAC8Q9NZF1 115 aa10.69□□□□□ -0.7
CHTOP-203ENST00000368690 MOBPQ13875 183 aa10.69□□□□□ -0.7
CHTOP-203ENST00000368690 Q6ZR54 194 aa10.68□□□□□ -0.7
CHTOP-203ENST00000368690 PHF5AQ7RTV0 110 aaKnown RBP10.67□□□□□ -0.7
CHTOP-203ENST00000368690 A6NN06 94 aa10.66□□□□□ -0.7
CHTOP-203ENST00000368690 KRTAP11-1Q8IUC1 163 aa10.65□□□□□ -0.71
CHTOP-203ENST00000368690 SPTSSBQ8NFR3 76 aa10.65□□□□□ -0.71
CHTOP-203ENST00000368690 C14orf177Q52M58 125 aa10.63□□□□□ -0.71
CHTOP-203ENST00000368690 Q96NJ1 140 aa10.62□□□□□ -0.71
CHTOP-203ENST00000368690 DNAH7Q8WXX0 4024 aa10.62□□□□□ -0.71
CHTOP-203ENST00000368690 PCOTHQ58A44 107 aa10.6□□□□□ -0.71
CHTOP-203ENST00000368690 C8orf17Q9NRJ1 99 aa10.59□□□□□ -0.71
CHTOP-203ENST00000368690 KRTAP13-1Q8IUC0 172 aa10.59□□□□□ -0.71
CHTOP-203ENST00000368690 STARD9Q9P2P6 4700 aa10.58□□□□□ -0.72
CHTOP-203ENST00000368690 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
CHTOP-203ENST00000368690 KRTAP1-5Q9BYS1 174 aa10.57□□□□□ -0.72
CHTOP-203ENST00000368690 RBM12B-AS1Q9P1G2 102 aa10.57□□□□□ -0.72
CHTOP-203ENST00000368690 PLECQ15149 4684 aaKnown RBP10.56□□□□□ -0.72
CHTOP-203ENST00000368690 SPAG11AQ6PDA7 123 aa10.55□□□□□ -0.72
CHTOP-203ENST00000368690 CHTF8P0CG12 524 aa10.55□□□□□ -0.72
CHTOP-203ENST00000368690 HRES1P13985 223 aa10.53□□□□□ -0.72
CHTOP-203ENST00000368690 A0A1B0GVX0 72 aa10.53□□□□□ -0.72
CHTOP-203ENST00000368690 WWC2-AS2Q96NR7 200 aa10.53□□□□□ -0.72
CHTOP-203ENST00000368690 C7orf65Q6ZTY9 151 aa10.52□□□□□ -0.73
CHTOP-203ENST00000368690 NBDYA0A0U1RRE5 68 aa10.5□□□□□ -0.73
CHTOP-203ENST00000368690 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms