RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 BPTFQ12830 3046 aa4.87□□□□□ -1.63
SSR2-202ENST00000368311 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
SSR2-202ENST00000368311 CHD7Q9P2D1 2997 aa4.86□□□□□ -1.63
SSR2-202ENST00000368311 Q1T7F1 81 aa4.86□□□□□ -1.63
SSR2-202ENST00000368311 H7BZZ5 65 aa4.86□□□□□ -1.63
SSR2-202ENST00000368311 WDR87Q6ZQQ6 2873 aa4.86□□□□□ -1.63
SSR2-202ENST00000368311 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
SSR2-202ENST00000368311 MGAM2Q2M2H8 2515 aa4.85□□□□□ -1.63
SSR2-202ENST00000368311 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
SSR2-202ENST00000368311 PANO1I0J062 215 aa4.84□□□□□ -1.63
SSR2-202ENST00000368311 DNAH12Q6ZR08 3092 aa4.84□□□□□ -1.63
SSR2-202ENST00000368311 CHD6Q8TD26 2715 aa4.84□□□□□ -1.63
SSR2-202ENST00000368311 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.64
SSR2-202ENST00000368311 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
SSR2-202ENST00000368311 KRTAP4-16G5E9R7 235 aaPredicted RBP4.82□□□□□ -1.64
SSR2-202ENST00000368311 SETD2Q9BYW2 2564 aaPredicted RBP4.82□□□□□ -1.64
SSR2-202ENST00000368311 SPINK7P58062 85 aa4.81□□□□□ -1.64
SSR2-202ENST00000368311 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
SSR2-202ENST00000368311 CENPFP49454 3210 aa4.8□□□□□ -1.64
SSR2-202ENST00000368311 LINC00472Q9H8W2 130 aa4.8□□□□□ -1.64
SSR2-202ENST00000368311 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
SSR2-202ENST00000368311 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
SSR2-202ENST00000368311 AKAP13Q12802 2813 aa4.79□□□□□ -1.64
SSR2-202ENST00000368311 H1FX-AS1Q4G0G2 97 aa4.77□□□□□ -1.65
SSR2-202ENST00000368311 COL6A5A8TX70 2615 aa4.77□□□□□ -1.65
SSR2-202ENST00000368311 TEP1Q99973 2627 aaKnown RBP4.77□□□□□ -1.65
SSR2-202ENST00000368311 A0A087X002 238 aa4.76□□□□□ -1.65
SSR2-202ENST00000368311 MMP24-AS1A0A0U1RRL7 71 aa4.76□□□□□ -1.65
SSR2-202ENST00000368311 ITPR2Q14571 2701 aa4.75□□□□□ -1.65
SSR2-202ENST00000368311 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
SSR2-202ENST00000368311 UQCR11O14957 56 aa4.75□□□□□ -1.65
SSR2-202ENST00000368311 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
SSR2-202ENST00000368311 COA5Q86WW8 74 aa4.72□□□□□ -1.65
SSR2-202ENST00000368311 CEP350Q5VT06 3117 aa4.71□□□□□ -1.66
SSR2-202ENST00000368311 KRTAP13-2Q52LG2 175 aa4.71□□□□□ -1.66
SSR2-202ENST00000368311 STAB1Q9NY15 2570 aa4.71□□□□□ -1.66
SSR2-202ENST00000368311 Q5W150 140 aa4.7□□□□□ -1.66
SSR2-202ENST00000368311 R4GN34 69 aa4.7□□□□□ -1.66
SSR2-202ENST00000368311 HIVEP1P15822 2718 aa4.7□□□□□ -1.66
SSR2-202ENST00000368311 USP34Q70CQ2 3546 aa4.69□□□□□ -1.66
SSR2-202ENST00000368311 NSD1Q96L73 2696 aaPredicted RBP4.69□□□□□ -1.66
SSR2-202ENST00000368311 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
SSR2-202ENST00000368311 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
SSR2-202ENST00000368311 DMAC1Q96GE9 116 aa4.67□□□□□ -1.66
SSR2-202ENST00000368311 KRTAP10-8P60410 259 aa4.67□□□□□ -1.66
SSR2-202ENST00000368311 C20orf166-AS1Q96NR2 134 aa4.67□□□□□ -1.66
SSR2-202ENST00000368311 A8MUU9 505 aa4.66□□□□□ -1.66
SSR2-202ENST00000368311 ZFHX3Q15911 3703 aa4.66□□□□□ -1.66
SSR2-202ENST00000368311 Q8NDZ9 215 aa4.66□□□□□ -1.66
SSR2-202ENST00000368311 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.66
SSR2-202ENST00000368311 CRIPTQ9P021 101 aa4.65□□□□□ -1.66
SSR2-202ENST00000368311 OCR1Q9BZK8 76 aa4.65□□□□□ -1.67
SSR2-202ENST00000368311 CYSTM1Q9H1C7 97 aa4.64□□□□□ -1.67
SSR2-202ENST00000368311 SETXQ7Z333 2677 aaKnown RBP4.64□□□□□ -1.67
SSR2-202ENST00000368311 KRTAP1-4P0C5Y4 121 aa4.64□□□□□ -1.67
SSR2-202ENST00000368311 BRCA2P51587 3418 aa4.62□□□□□ -1.67
SSR2-202ENST00000368311 Q8N9P0 234 aaPredicted RBP4.61□□□□□ -1.67
SSR2-202ENST00000368311 TENM4Q6N022 2769 aa4.61□□□□□ -1.67
SSR2-202ENST00000368311 XP32Q5T750 250 aa4.6□□□□□ -1.67
SSR2-202ENST00000368311 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
SSR2-202ENST00000368311 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.67
SSR2-202ENST00000368311 SPTBN5Q9NRC6 3674 aaKnown RBP4.59□□□□□ -1.68
SSR2-202ENST00000368311 TEX15Q9BXT5 2789 aa4.59□□□□□ -1.68
SSR2-202ENST00000368311 KRTAP7-1Q8IUC3 87 aa4.58□□□□□ -1.68
SSR2-202ENST00000368311 A0A1B0GU33 70 aa4.58□□□□□ -1.68
SSR2-202ENST00000368311 M0QZ58 72 aa4.58□□□□□ -1.68
SSR2-202ENST00000368311 KRTAP13-3Q3SY46 172 aa4.57□□□□□ -1.68
SSR2-202ENST00000368311 APCP25054 2843 aa4.56□□□□□ -1.68
SSR2-202ENST00000368311 KRTAP11-1Q8IUC1 163 aa4.56□□□□□ -1.68
SSR2-202ENST00000368311 C5orf42Q9H799 3197 aa4.56□□□□□ -1.68
SSR2-202ENST00000368311 A6NN06 94 aa4.56□□□□□ -1.68
SSR2-202ENST00000368311 A0A0C4DFX4 3053 aa4.55□□□□□ -1.68
SSR2-202ENST00000368311 ADM2Q7Z4H4 148 aa4.54□□□□□ -1.68
SSR2-202ENST00000368311 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
SSR2-202ENST00000368311 Q5VV11 94 aa4.54□□□□□ -1.68
SSR2-202ENST00000368311 MKI67P46013 3256 aaKnown RBP4.53□□□□□ -1.68
SSR2-202ENST00000368311 ASH1LQ9NR48 2969 aaKnown RBP4.53□□□□□ -1.68
SSR2-202ENST00000368311 DSPP15924 2871 aaKnown RBP4.53□□□□□ -1.68
SSR2-202ENST00000368311 WDFY3Q8IZQ1 3526 aa4.52□□□□□ -1.69
SSR2-202ENST00000368311 PCNTO95613 3336 aa4.51□□□□□ -1.69
SSR2-202ENST00000368311 REV3LO60673 3130 aa4.48□□□□□ -1.69
SSR2-202ENST00000368311 ALMS1Q8TCU4 4167 aa4.48□□□□□ -1.69
SSR2-202ENST00000368311 RANBP2P49792 3224 aaKnown RBP4.48□□□□□ -1.69
SSR2-202ENST00000368311 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
SSR2-202ENST00000368311 ROMO1P60602 79 aa4.46□□□□□ -1.7
SSR2-202ENST00000368311 A0A0D9SG42 100 aa4.46□□□□□ -1.7
SSR2-202ENST00000368311 CDH23Q9H251 3354 aa4.45□□□□□ -1.7
SSR2-202ENST00000368311 MGAQ8IWI9 3026 aa4.45□□□□□ -1.7
SSR2-202ENST00000368311 UTP20O75691 2785 aaKnown RBP4.44□□□□□ -1.7
SSR2-202ENST00000368311 SZT2Q5T011 3432 aa4.44□□□□□ -1.7
SSR2-202ENST00000368311 CENPEQ02224 2701 aa4.43□□□□□ -1.7
SSR2-202ENST00000368311 PRRC2CQ9Y520 2896 aaKnown RBP4.43□□□□□ -1.7
SSR2-202ENST00000368311 FLNCQ14315 2725 aa4.43□□□□□ -1.7
SSR2-202ENST00000368311 LAMA3Q16787 3333 aa4.42□□□□□ -1.7
SSR2-202ENST00000368311 XIRP2A4UGR9 3374 aa4.41□□□□□ -1.7
SSR2-202ENST00000368311 EYSQ5T1H1 3165 aa4.4□□□□□ -1.71
SSR2-202ENST00000368311 KRTAP10-10P60014 251 aa4.4□□□□□ -1.71
SSR2-202ENST00000368311 NOTCH1P46531 2555 aa4.39□□□□□ -1.71
SSR2-202ENST00000368311 PDZD2O15018 2839 aa4.39□□□□□ -1.71
SSR2-202ENST00000368311 ITPR1Q14643 2758 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms