RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 PLAC8Q9NZF1 115 aa5.09□□□□□ -1.59
SHPRH-203ENST00000367505 MGAQ8IWI9 3026 aa5.09□□□□□ -1.59
SHPRH-203ENST00000367505 HTTP42858 3142 aa5.09□□□□□ -1.6
SHPRH-203ENST00000367505 TNP2Q05952 138 aa5.09□□□□□ -1.6
SHPRH-203ENST00000367505 KRTAP26-1Q6PEX3 210 aa5.08□□□□□ -1.6
SHPRH-203ENST00000367505 OXTP01178 125 aa5.08□□□□□ -1.6
SHPRH-203ENST00000367505 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
SHPRH-203ENST00000367505 TEX15Q9BXT5 2789 aa5.07□□□□□ -1.6
SHPRH-203ENST00000367505 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
SHPRH-203ENST00000367505 NOTCH1P46531 2555 aa5.07□□□□□ -1.6
SHPRH-203ENST00000367505 COX6B2Q6YFQ2 88 aa5.05□□□□□ -1.6
SHPRH-203ENST00000367505 LAMA2P24043 3122 aaKnown RBP5.05□□□□□ -1.6
SHPRH-203ENST00000367505 A0A0D9SG42 100 aa5.05□□□□□ -1.6
SHPRH-203ENST00000367505 SMR3BP02814 79 aaPredicted RBP5.05□□□□□ -1.6
SHPRH-203ENST00000367505 ZCCHC13Q8WW36 166 aaKnown RBP5.05□□□□□ -1.6
SHPRH-203ENST00000367505 Q5W150 140 aa5.04□□□□□ -1.6
SHPRH-203ENST00000367505 RANBP2P49792 3224 aaKnown RBP5.04□□□□□ -1.6
SHPRH-203ENST00000367505 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
SHPRH-203ENST00000367505 J3QL48 77 aa5.03□□□□□ -1.6
SHPRH-203ENST00000367505 KRTAP4-16G5E9R7 235 aaPredicted RBP5.03□□□□□ -1.6
SHPRH-203ENST00000367505 TEP1Q99973 2627 aaKnown RBP5.02□□□□□ -1.61
SHPRH-203ENST00000367505 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
SHPRH-203ENST00000367505 Q6ZR54 194 aa5.02□□□□□ -1.61
SHPRH-203ENST00000367505 ASB16-AS1Q495Z4 193 aa5.01□□□□□ -1.61
SHPRH-203ENST00000367505 SPINK7P58062 85 aa5.01□□□□□ -1.61
SHPRH-203ENST00000367505 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
SHPRH-203ENST00000367505 LINC00483Q53H64 154 aa4.99□□□□□ -1.61
SHPRH-203ENST00000367505 MAP1AP78559 2803 aaPredicted RBP4.98□□□□□ -1.61
SHPRH-203ENST00000367505 COL6A5A8TX70 2615 aa4.98□□□□□ -1.61
SHPRH-203ENST00000367505 NBEAL2Q6ZNJ1 2754 aa4.97□□□□□ -1.61
SHPRH-203ENST00000367505 SETXQ7Z333 2677 aaKnown RBP4.97□□□□□ -1.61
SHPRH-203ENST00000367505 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
SHPRH-203ENST00000367505 Q6ZSA8 131 aa4.96□□□□□ -1.62
SHPRH-203ENST00000367505 KRTAP1-5Q9BYS1 174 aa4.96□□□□□ -1.62
SHPRH-203ENST00000367505 WDFY4Q6ZS81 3184 aa4.96□□□□□ -1.62
SHPRH-203ENST00000367505 DMBT1Q9UGM3 2413 aaPredicted RBP4.95□□□□□ -1.62
SHPRH-203ENST00000367505 CSAG1Q6PB30 78 aa4.95□□□□□ -1.62
SHPRH-203ENST00000367505 FRYQ5TBA9 3013 aa4.95□□□□□ -1.62
SHPRH-203ENST00000367505 LCE6AA0A183 80 aa4.94□□□□□ -1.62
SHPRH-203ENST00000367505 MKI67P46013 3256 aaKnown RBP4.94□□□□□ -1.62
SHPRH-203ENST00000367505 VPS13AQ96RL7 3174 aa4.93□□□□□ -1.62
SHPRH-203ENST00000367505 UBR5O95071 2799 aaPredicted RBP4.92□□□□□ -1.62
SHPRH-203ENST00000367505 S4R3F8 94 aa4.92□□□□□ -1.62
SHPRH-203ENST00000367505 DSPP15924 2871 aaKnown RBP4.92□□□□□ -1.62
SHPRH-203ENST00000367505 STAB2Q8WWQ8 2551 aa4.92□□□□□ -1.62
SHPRH-203ENST00000367505 LAMA3Q16787 3333 aa4.91□□□□□ -1.62
SHPRH-203ENST00000367505 TRIOO75962 3097 aa4.91□□□□□ -1.62
SHPRH-203ENST00000367505 CAMK2N1Q7Z7J9 78 aa4.91□□□□□ -1.62
SHPRH-203ENST00000367505 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.62
SHPRH-203ENST00000367505 NSD1Q96L73 2696 aaPredicted RBP4.89□□□□□ -1.63
SHPRH-203ENST00000367505 H3BS24 57 aa4.89□□□□□ -1.63
SHPRH-203ENST00000367505 IGSF10Q6WRI0 2623 aa4.89□□□□□ -1.63
SHPRH-203ENST00000367505 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
SHPRH-203ENST00000367505 ROMO1P60602 79 aa4.87□□□□□ -1.63
SHPRH-203ENST00000367505 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
SHPRH-203ENST00000367505 KMT2BQ9UMN6 2715 aaPredicted RBP4.85□□□□□ -1.63
SHPRH-203ENST00000367505 ITPR2Q14571 2701 aa4.84□□□□□ -1.63
SHPRH-203ENST00000367505 PRUNE2Q8WUY3 3088 aa4.83□□□□□ -1.64
SHPRH-203ENST00000367505 KALRNO60229 2985 aa4.83□□□□□ -1.64
SHPRH-203ENST00000367505 ITPR1Q14643 2758 aa4.83□□□□□ -1.64
SHPRH-203ENST00000367505 R4GN34 69 aa4.82□□□□□ -1.64
SHPRH-203ENST00000367505 A6NN06 94 aa4.82□□□□□ -1.64
SHPRH-203ENST00000367505 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
SHPRH-203ENST00000367505 PANO1I0J062 215 aa4.82□□□□□ -1.64
SHPRH-203ENST00000367505 NBEAQ8NFP9 2946 aa4.81□□□□□ -1.64
SHPRH-203ENST00000367505 KRTAP10-1P60331 282 aa4.81□□□□□ -1.64
SHPRH-203ENST00000367505 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
SHPRH-203ENST00000367505 BAHCC1Q9P281 2608 aa4.79□□□□□ -1.64
SHPRH-203ENST00000367505 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
SHPRH-203ENST00000367505 FLNCQ14315 2725 aa4.79□□□□□ -1.64
SHPRH-203ENST00000367505 BRCA2P51587 3418 aa4.79□□□□□ -1.64
SHPRH-203ENST00000367505 A0A087X002 238 aa4.78□□□□□ -1.64
SHPRH-203ENST00000367505 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
SHPRH-203ENST00000367505 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
SHPRH-203ENST00000367505 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
SHPRH-203ENST00000367505 APCP25054 2843 aa4.78□□□□□ -1.64
SHPRH-203ENST00000367505 XIRP2A4UGR9 3374 aa4.78□□□□□ -1.64
SHPRH-203ENST00000367505 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
SHPRH-203ENST00000367505 FREM2Q5SZK8 3169 aa4.76□□□□□ -1.65
SHPRH-203ENST00000367505 UNC80Q8N2C7 3258 aa4.76□□□□□ -1.65
SHPRH-203ENST00000367505 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
SHPRH-203ENST00000367505 Q6ZRN7 208 aaPredicted RBP4.75□□□□□ -1.65
SHPRH-203ENST00000367505 UTP20O75691 2785 aaKnown RBP4.73□□□□□ -1.65
SHPRH-203ENST00000367505 NIPBLQ6KC79 2804 aaeCLIP4.73□□□□□ -1.65
SHPRH-203ENST00000367505 ADGRG4Q8IZF6 3080 aa4.73□□□□□ -1.65
SHPRH-203ENST00000367505 M0QZ58 72 aa4.72□□□□□ -1.65
SHPRH-203ENST00000367505 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
SHPRH-203ENST00000367505 Q5VSD8 79 aa4.71□□□□□ -1.66
SHPRH-203ENST00000367505 LAMA1P25391 3075 aa4.7□□□□□ -1.66
SHPRH-203ENST00000367505 CELSR3Q9NYQ7 3312 aa4.7□□□□□ -1.66
SHPRH-203ENST00000367505 ASH1LQ9NR48 2969 aaKnown RBP4.7□□□□□ -1.66
SHPRH-203ENST00000367505 ATMQ13315 3056 aa4.69□□□□□ -1.66
SHPRH-203ENST00000367505 TACC2O95359 2948 aa4.69□□□□□ -1.66
SHPRH-203ENST00000367505 DMXL2Q8TDJ6 3036 aa4.69□□□□□ -1.66
SHPRH-203ENST00000367505 M0R2T5 61 aa4.69□□□□□ -1.66
SHPRH-203ENST00000367505 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
SHPRH-203ENST00000367505 LRBAP50851 2863 aa4.68□□□□□ -1.66
SHPRH-203ENST00000367505 FRYLO94915 3013 aa4.68□□□□□ -1.66
SHPRH-203ENST00000367505 COL12A1Q99715 3063 aa4.66□□□□□ -1.66
SHPRH-203ENST00000367505 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms