RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 OBSCN-AS1Q96MR7 158 aa5.93□□□□□ -1.46
SYNE1-209ENST00000367257 FLNBO75369 2602 aaKnown RBP5.93□□□□□ -1.46
SYNE1-209ENST00000367257 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
SYNE1-209ENST00000367257 FBN2P35556 2912 aa5.92□□□□□ -1.46
SYNE1-209ENST00000367257 C9orf129Q5T035 196 aaKnown RBP5.91□□□□□ -1.46
SYNE1-209ENST00000367257 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
SYNE1-209ENST00000367257 CSNK1G2-AS1Q8NCQ2 148 aa5.9□□□□□ -1.46
SYNE1-209ENST00000367257 OCR1Q9BZK8 76 aa5.9□□□□□ -1.46
SYNE1-209ENST00000367257 POLQO75417 2590 aa5.9□□□□□ -1.46
SYNE1-209ENST00000367257 IGFL1Q6UW32 110 aa5.9□□□□□ -1.46
SYNE1-209ENST00000367257 TET2Q6N021 2002 aaPredicted RBP5.9□□□□□ -1.46
SYNE1-209ENST00000367257 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.47
SYNE1-209ENST00000367257 C15orf56Q8N910 161 aa5.9□□□□□ -1.47
SYNE1-209ENST00000367257 Q96NJ1 140 aa5.89□□□□□ -1.47
SYNE1-209ENST00000367257 Q5VV11 94 aa5.89□□□□□ -1.47
SYNE1-209ENST00000367257 LRBAP50851 2863 aa5.89□□□□□ -1.47
SYNE1-209ENST00000367257 ZNF861PO60384 105 aa5.88□□□□□ -1.47
SYNE1-209ENST00000367257 Q8N9P0 234 aaPredicted RBP5.87□□□□□ -1.47
SYNE1-209ENST00000367257 IGSF10Q6WRI0 2623 aa5.86□□□□□ -1.47
SYNE1-209ENST00000367257 CELSR1Q9NYQ6 3014 aa5.86□□□□□ -1.47
SYNE1-209ENST00000367257 UTP20O75691 2785 aaKnown RBP5.86□□□□□ -1.47
SYNE1-209ENST00000367257 C19orf73Q9NVV2 129 aa5.86□□□□□ -1.47
SYNE1-209ENST00000367257 Q8N377 158 aa5.86□□□□□ -1.47
SYNE1-209ENST00000367257 WWC2-AS2Q96NR7 200 aa5.86□□□□□ -1.47
SYNE1-209ENST00000367257 CNBPP62633 177 aaKnown RBP5.85□□□□□ -1.47
SYNE1-209ENST00000367257 COL12A1Q99715 3063 aa5.85□□□□□ -1.47
SYNE1-209ENST00000367257 FLG2Q5D862 2391 aaPredicted RBP5.85□□□□□ -1.47
SYNE1-209ENST00000367257 IGLV5-48A0A075B6I7 105 aa5.85□□□□□ -1.47
SYNE1-209ENST00000367257 FAM104AQ969W3 186 aa5.84□□□□□ -1.47
SYNE1-209ENST00000367257 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
SYNE1-209ENST00000367257 C9orf163Q8N9P6 203 aa5.83□□□□□ -1.48
SYNE1-209ENST00000367257 LINC00304Q8N9R0 145 aa5.83□□□□□ -1.48
SYNE1-209ENST00000367257 USP24Q9UPU5 2620 aa5.82□□□□□ -1.48
SYNE1-209ENST00000367257 CSAG1Q6PB30 78 aa5.81□□□□□ -1.48
SYNE1-209ENST00000367257 ATRQ13535 2644 aa5.81□□□□□ -1.48
SYNE1-209ENST00000367257 PDZD2O15018 2839 aa5.81□□□□□ -1.48
SYNE1-209ENST00000367257 KRTAP24-1Q3LI83 254 aa5.81□□□□□ -1.48
SYNE1-209ENST00000367257 ANK3Q12955 4377 aaKnown RBP5.79□□□□□ -1.48
SYNE1-209ENST00000367257 SPRR4Q96PI1 79 aa5.79□□□□□ -1.48
SYNE1-209ENST00000367257 ASB16-AS1Q495Z4 193 aa5.79□□□□□ -1.48
SYNE1-209ENST00000367257 CMYA5Q8N3K9 4069 aa5.78□□□□□ -1.48
SYNE1-209ENST00000367257 TACC2O95359 2948 aa5.78□□□□□ -1.48
SYNE1-209ENST00000367257 FAM168BA1KXE4 195 aa5.77□□□□□ -1.49
SYNE1-209ENST00000367257 CHTF8P0CG12 524 aa5.77□□□□□ -1.49
SYNE1-209ENST00000367257 ANKRD17O75179 2603 aaKnown RBP5.77□□□□□ -1.49
SYNE1-209ENST00000367257 IGLV7-43P04211 117 aa5.77□□□□□ -1.49
SYNE1-209ENST00000367257 DSCR10P59022 87 aa5.76□□□□□ -1.49
SYNE1-209ENST00000367257 IGLV7-46A0A075B6I9 117 aa5.76□□□□□ -1.49
SYNE1-209ENST00000367257 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
SYNE1-209ENST00000367257 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
SYNE1-209ENST00000367257 A0A087WTM6 91 aa5.75□□□□□ -1.49
SYNE1-209ENST00000367257 A0A1W2PNM2 257 aa5.75□□□□□ -1.49
SYNE1-209ENST00000367257 HECTD1Q9ULT8 2610 aa5.75□□□□□ -1.49
SYNE1-209ENST00000367257 FLNCQ14315 2725 aa5.75□□□□□ -1.49
SYNE1-209ENST00000367257 MAST4O15021 2626 aa5.75□□□□□ -1.49
SYNE1-209ENST00000367257 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
SYNE1-209ENST00000367257 A0A096LNT2 108 aa5.74□□□□□ -1.49
SYNE1-209ENST00000367257 KRTAP16-1A8MUX0 517 aa5.74□□□□□ -1.49
SYNE1-209ENST00000367257 GIG44P09565 113 aaPredicted RBP5.74□□□□□ -1.49
SYNE1-209ENST00000367257 ZNF575Q86XF7 245 aa5.74□□□□□ -1.49
SYNE1-209ENST00000367257 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
SYNE1-209ENST00000367257 MGAM2Q2M2H8 2515 aa5.73□□□□□ -1.49
SYNE1-209ENST00000367257 SPINK7P58062 85 aa5.72□□□□□ -1.49
SYNE1-209ENST00000367257 APLNQ9ULZ1 77 aa5.72□□□□□ -1.49
SYNE1-209ENST00000367257 A6NN06 94 aa5.72□□□□□ -1.49
SYNE1-209ENST00000367257 DNAH3Q8TD57 4116 aa5.69□□□□□ -1.5
SYNE1-209ENST00000367257 K7EIL1 84 aa5.68□□□□□ -1.5
SYNE1-209ENST00000367257 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
SYNE1-209ENST00000367257 J3QL48 77 aa5.67□□□□□ -1.5
SYNE1-209ENST00000367257 PSORS1C2Q9UIG4 136 aa5.67□□□□□ -1.5
SYNE1-209ENST00000367257 ANK2Q01484 3957 aa5.66□□□□□ -1.5
SYNE1-209ENST00000367257 HELZ2Q9BYK8 2649 aaKnown RBP5.66□□□□□ -1.5
SYNE1-209ENST00000367257 KRTAP10-11P60412 298 aa5.65□□□□□ -1.5
SYNE1-209ENST00000367257 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
SYNE1-209ENST00000367257 SPRR1BP22528 89 aa5.64□□□□□ -1.51
SYNE1-209ENST00000367257 LINC00483Q53H64 154 aa5.64□□□□□ -1.51
SYNE1-209ENST00000367257 OTOGQ6ZRI0 2925 aa5.64□□□□□ -1.51
SYNE1-209ENST00000367257 APCP25054 2843 aa5.63□□□□□ -1.51
SYNE1-209ENST00000367257 A0A1B0GU33 70 aa5.62□□□□□ -1.51
SYNE1-209ENST00000367257 SPRR1AP35321 89 aa5.62□□□□□ -1.51
SYNE1-209ENST00000367257 TNP2Q05952 138 aa5.62□□□□□ -1.51
SYNE1-209ENST00000367257 CHD6Q8TD26 2715 aa5.62□□□□□ -1.51
SYNE1-209ENST00000367257 STAB1Q9NY15 2570 aa5.61□□□□□ -1.51
SYNE1-209ENST00000367257 HRES1P13985 223 aa5.6□□□□□ -1.51
SYNE1-209ENST00000367257 MXRA5Q9NR99 2828 aa5.59□□□□□ -1.52
SYNE1-209ENST00000367257 MMP24-AS1A0A0U1RRL7 71 aa5.58□□□□□ -1.52
SYNE1-209ENST00000367257 GCN1Q92616 2671 aaKnown RBP5.57□□□□□ -1.52
SYNE1-209ENST00000367257 C9orf92A6NGG3 77 aa5.56□□□□□ -1.52
SYNE1-209ENST00000367257 A0A0G2JQZ4 141 aa5.56□□□□□ -1.52
SYNE1-209ENST00000367257 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
SYNE1-209ENST00000367257 KRTAP10-3P60369 221 aa5.56□□□□□ -1.52
SYNE1-209ENST00000367257 PLAC8Q9NZF1 115 aa5.56□□□□□ -1.52
SYNE1-209ENST00000367257 Q8N1X5 172 aa5.54□□□□□ -1.52
SYNE1-209ENST00000367257 BAHCC1Q9P281 2608 aa5.53□□□□□ -1.52
SYNE1-209ENST00000367257 Q6ZSA8 131 aa5.53□□□□□ -1.52
SYNE1-209ENST00000367257 ZANQ9Y493 2812 aa5.52□□□□□ -1.53
SYNE1-209ENST00000367257 LINC00472Q9H8W2 130 aa5.51□□□□□ -1.53
SYNE1-209ENST00000367257 DMBT1Q9UGM3 2413 aaPredicted RBP5.51□□□□□ -1.53
SYNE1-209ENST00000367257 CENPEQ02224 2701 aa5.51□□□□□ -1.53
SYNE1-209ENST00000367257 A0A0D9SG42 100 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms