RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
PRKN-205ENST00000366897 SPRR4Q96PI1 79 aa8.63□□□□□ -1.03
PRKN-205ENST00000366897 IGKV2-24A0A0C4DH68 120 aa8.63□□□□□ -1.03
PRKN-205ENST00000366897 PSPHP1O15172 72 aa8.63□□□□□ -1.03
PRKN-205ENST00000366897 LINC00588Q9Y4M8 146 aa8.63□□□□□ -1.03
PRKN-205ENST00000366897 HCG22E2RYF7 251 aa8.62□□□□□ -1.03
PRKN-205ENST00000366897 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
PRKN-205ENST00000366897 A0A087WSZ3 146 aa8.61□□□□□ -1.03
PRKN-205ENST00000366897 LCE6AA0A183 80 aa8.61□□□□□ -1.03
PRKN-205ENST00000366897 TLX1NBP0CAT3 122 aa8.61□□□□□ -1.03
PRKN-205ENST00000366897 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
PRKN-205ENST00000366897 IGFL1Q6UW32 110 aa8.61□□□□□ -1.03
PRKN-205ENST00000366897 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
PRKN-205ENST00000366897 REG3GQ6UW15 175 aa8.59□□□□□ -1.03
PRKN-205ENST00000366897 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
PRKN-205ENST00000366897 K7EIL1 84 aa8.58□□□□□ -1.04
PRKN-205ENST00000366897 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
PRKN-205ENST00000366897 COL7A1Q02388 2944 aa8.57□□□□□ -1.04
PRKN-205ENST00000366897 C1orf195Q5TG92 126 aa8.57□□□□□ -1.04
PRKN-205ENST00000366897 LYSTQ99698 3801 aa8.57□□□□□ -1.04
PRKN-205ENST00000366897 A0A1B0GW54 56 aa8.55□□□□□ -1.04
PRKN-205ENST00000366897 LINC00208Q96KT6 92 aa8.55□□□□□ -1.04
PRKN-205ENST00000366897 A0A096LNI7 61 aa8.55□□□□□ -1.04
PRKN-205ENST00000366897 TENM2Q9NT68 2774 aa8.55□□□□□ -1.04
PRKN-205ENST00000366897 STAB2Q8WWQ8 2551 aa8.55□□□□□ -1.04
PRKN-205ENST00000366897 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.04
PRKN-205ENST00000366897 A8MU10 97 aa8.51□□□□□ -1.05
PRKN-205ENST00000366897 DNAH1Q9P2D7 4330 aa8.51□□□□□ -1.05
PRKN-205ENST00000366897 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
PRKN-205ENST00000366897 CHTF8P0CG12 524 aa8.51□□□□□ -1.05
PRKN-205ENST00000366897 A8MUN3 132 aa8.5□□□□□ -1.05
PRKN-205ENST00000366897 V9GYY9 64 aa8.5□□□□□ -1.05
PRKN-205ENST00000366897 UBE2AP49459 152 aa8.49□□□□□ -1.05
PRKN-205ENST00000366897 MP68P56378 58 aa8.49□□□□□ -1.05
PRKN-205ENST00000366897 Q1T7F1 81 aa8.49□□□□□ -1.05
PRKN-205ENST00000366897 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
PRKN-205ENST00000366897 PHF5AQ7RTV0 110 aaKnown RBP8.47□□□□□ -1.05
PRKN-205ENST00000366897 H0Y9P7 68 aa8.46□□□□□ -1.05
PRKN-205ENST00000366897 CASC2Q6XLA1 102 aa8.46□□□□□ -1.05
PRKN-205ENST00000366897 B9D2Q9BPU9 175 aa8.46□□□□□ -1.05
PRKN-205ENST00000366897 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
PRKN-205ENST00000366897 DNAH9Q9NYC9 4486 aa8.45□□□□□ -1.06
PRKN-205ENST00000366897 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
PRKN-205ENST00000366897 CNBPP62633 177 aaKnown RBP8.44□□□□□ -1.06
PRKN-205ENST00000366897 NDUFB1O75438 58 aa8.42□□□□□ -1.06
PRKN-205ENST00000366897 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
PRKN-205ENST00000366897 HUWE1Q7Z6Z7 4374 aaKnown RBP8.41□□□□□ -1.06
PRKN-205ENST00000366897 H0Y9J4 135 aa8.41□□□□□ -1.06
PRKN-205ENST00000366897 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
PRKN-205ENST00000366897 IGLV8-61A0A075B6I0 122 aa8.4□□□□□ -1.06
PRKN-205ENST00000366897 Q5VV11 94 aa8.38□□□□□ -1.07
PRKN-205ENST00000366897 LINC00472Q9H8W2 130 aa8.37□□□□□ -1.07
PRKN-205ENST00000366897 A8MWP4 228 aa8.37□□□□□ -1.07
PRKN-205ENST00000366897 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
PRKN-205ENST00000366897 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
PRKN-205ENST00000366897 PRR15LQ9BU68 103 aa8.35□□□□□ -1.07
PRKN-205ENST00000366897 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
PRKN-205ENST00000366897 PANO1I0J062 215 aa8.34□□□□□ -1.07
PRKN-205ENST00000366897 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
PRKN-205ENST00000366897 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
PRKN-205ENST00000366897 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
PRKN-205ENST00000366897 WWC2-AS2Q96NR7 200 aa8.32□□□□□ -1.08
PRKN-205ENST00000366897 UBE2DNLQ8IWF7 75 aa8.31□□□□□ -1.08
PRKN-205ENST00000366897 C9orf163Q8N9P6 203 aa8.31□□□□□ -1.08
PRKN-205ENST00000366897 DNAH7Q8WXX0 4024 aa8.3□□□□□ -1.08
PRKN-205ENST00000366897 COA5Q86WW8 74 aa8.29□□□□□ -1.08
PRKN-205ENST00000366897 SPANXA2-OT1Q8N9U9 137 aa8.29□□□□□ -1.08
PRKN-205ENST00000366897 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
PRKN-205ENST00000366897 KMT2CQ8NEZ4 4911 aaKnown RBP8.28□□□□□ -1.08
PRKN-205ENST00000366897 SPRR1BP22528 89 aa8.28□□□□□ -1.08
PRKN-205ENST00000366897 NDUFS5O43920 106 aa8.27□□□□□ -1.09
PRKN-205ENST00000366897 CD164Q04900 197 aa8.26□□□□□ -1.09
PRKN-205ENST00000366897 H3BPC8 53 aa8.25□□□□□ -1.09
PRKN-205ENST00000366897 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
PRKN-205ENST00000366897 IGHV6-1A0A0B4J1U7 121 aa8.24□□□□□ -1.09
PRKN-205ENST00000366897 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
PRKN-205ENST00000366897 LIMD2Q9BT23 127 aa8.24□□□□□ -1.09
PRKN-205ENST00000366897 A6NED7 52 aa8.23□□□□□ -1.09
PRKN-205ENST00000366897 LCA10Q71F78 164 aa8.23□□□□□ -1.09
PRKN-205ENST00000366897 Q96NJ1 140 aa8.23□□□□□ -1.09
PRKN-205ENST00000366897 MOBPQ13875 183 aa8.21□□□□□ -1.09
PRKN-205ENST00000366897 STARD9Q9P2P6 4700 aa8.21□□□□□ -1.1
PRKN-205ENST00000366897 IGLV7-46A0A075B6I9 117 aa8.21□□□□□ -1.1
PRKN-205ENST00000366897 A0A087X002 238 aa8.21□□□□□ -1.1
PRKN-205ENST00000366897 NOTCH2NLQ7Z3S9 236 aa8.21□□□□□ -1.1
PRKN-205ENST00000366897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.2□□□□□ -1.1
PRKN-205ENST00000366897 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
PRKN-205ENST00000366897 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
PRKN-205ENST00000366897 PLECQ15149 4684 aaKnown RBP8.18□□□□□ -1.1
PRKN-205ENST00000366897 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
PRKN-205ENST00000366897 FRAS1Q86XX4 4008 aa8.17□□□□□ -1.1
PRKN-205ENST00000366897 APLNQ9ULZ1 77 aa8.17□□□□□ -1.1
PRKN-205ENST00000366897 Q75L30 129 aa8.15□□□□□ -1.11
PRKN-205ENST00000366897 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
PRKN-205ENST00000366897 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
PRKN-205ENST00000366897 RYR3Q15413 4870 aa8.14□□□□□ -1.11
PRKN-205ENST00000366897 HRES1P13985 223 aa8.13□□□□□ -1.11
PRKN-205ENST00000366897 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
PRKN-205ENST00000366897 A0A1B0GVX0 72 aa8.12□□□□□ -1.11
PRKN-205ENST00000366897 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms