RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZNF861PO60384 105 aa7.16□□□□□ -1.26
CDC42BPA-205ENST00000366769 H3BNG1 76 aa7.15□□□□□ -1.26
CDC42BPA-205ENST00000366769 KMT2BQ9UMN6 2715 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-205ENST00000366769 KRTAP24-1Q3LI83 254 aa7.15□□□□□ -1.27
CDC42BPA-205ENST00000366769 A0A096LNT2 108 aa7.15□□□□□ -1.27
CDC42BPA-205ENST00000366769 C9orf163Q8N9P6 203 aa7.14□□□□□ -1.27
CDC42BPA-205ENST00000366769 A8MU10 97 aa7.14□□□□□ -1.27
CDC42BPA-205ENST00000366769 TLX1NBP0CAT3 122 aa7.14□□□□□ -1.27
CDC42BPA-205ENST00000366769 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
CDC42BPA-205ENST00000366769 A6NN06 94 aa7.13□□□□□ -1.27
CDC42BPA-205ENST00000366769 HRES1P13985 223 aa7.13□□□□□ -1.27
CDC42BPA-205ENST00000366769 A0A0A0MQY5 61 aa7.11□□□□□ -1.27
CDC42BPA-205ENST00000366769 SRRM2Q9UQ35 2752 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-205ENST00000366769 Q6ZSA8 131 aa7.11□□□□□ -1.27
CDC42BPA-205ENST00000366769 KALRNO60229 2985 aa7.1□□□□□ -1.27
CDC42BPA-205ENST00000366769 SRCAPQ6ZRS2 3230 aa7.09□□□□□ -1.27
CDC42BPA-205ENST00000366769 IGLV7-46A0A075B6I9 117 aa7.09□□□□□ -1.27
CDC42BPA-205ENST00000366769 DMAC1Q96GE9 116 aa7.09□□□□□ -1.27
CDC42BPA-205ENST00000366769 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
CDC42BPA-205ENST00000366769 A0A1B0GU33 70 aa7.07□□□□□ -1.28
CDC42BPA-205ENST00000366769 ASH1LQ9NR48 2969 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-205ENST00000366769 C5orf42Q9H799 3197 aa7.06□□□□□ -1.28
CDC42BPA-205ENST00000366769 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-205ENST00000366769 KRTAP16-1A8MUX0 517 aa7.05□□□□□ -1.28
CDC42BPA-205ENST00000366769 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
CDC42BPA-205ENST00000366769 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
CDC42BPA-205ENST00000366769 LAMA2P24043 3122 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-205ENST00000366769 A0A087WTM6 91 aa7.04□□□□□ -1.28
CDC42BPA-205ENST00000366769 PCNTO95613 3336 aa7.03□□□□□ -1.28
CDC42BPA-205ENST00000366769 FRYQ5TBA9 3013 aa7.02□□□□□ -1.29
CDC42BPA-205ENST00000366769 LINC00612Q8N6U2 182 aa7.01□□□□□ -1.29
CDC42BPA-205ENST00000366769 K7EIL1 84 aa7□□□□□ -1.29
CDC42BPA-205ENST00000366769 TRIOO75962 3097 aa6.99□□□□□ -1.29
CDC42BPA-205ENST00000366769 KRTAP10-11P60412 298 aa6.99□□□□□ -1.29
CDC42BPA-205ENST00000366769 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
CDC42BPA-205ENST00000366769 Q8NDZ9 215 aa6.99□□□□□ -1.29
CDC42BPA-205ENST00000366769 EP400Q96L91 3159 aa6.98□□□□□ -1.29
CDC42BPA-205ENST00000366769 PDZD2O15018 2839 aa6.98□□□□□ -1.29
CDC42BPA-205ENST00000366769 C10orf142B7Z368 130 aa6.98□□□□□ -1.29
CDC42BPA-205ENST00000366769 CELSR2Q9HCU4 2923 aa6.97□□□□□ -1.29
CDC42BPA-205ENST00000366769 GIG44P09565 113 aaPredicted RBP6.96□□□□□ -1.29
CDC42BPA-205ENST00000366769 S4R3F8 94 aa6.96□□□□□ -1.3
CDC42BPA-205ENST00000366769 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
CDC42BPA-205ENST00000366769 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
CDC42BPA-205ENST00000366769 NF1P21359 2839 aa6.94□□□□□ -1.3
CDC42BPA-205ENST00000366769 CASC10Q5T4H9 136 aa6.93□□□□□ -1.3
CDC42BPA-205ENST00000366769 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
CDC42BPA-205ENST00000366769 PLAC4Q8WY50 150 aa6.9□□□□□ -1.3
CDC42BPA-205ENST00000366769 ZANQ9Y493 2812 aa6.9□□□□□ -1.3
CDC42BPA-205ENST00000366769 KLK9Q2XQG4 91 aa6.89□□□□□ -1.31
CDC42BPA-205ENST00000366769 PRR34Q9NV39 138 aa6.88□□□□□ -1.31
CDC42BPA-205ENST00000366769 R4GN34 69 aa6.88□□□□□ -1.31
CDC42BPA-205ENST00000366769 NIPBLQ6KC79 2804 aaeCLIP6.88□□□□□ -1.312e-6■■■■□ 19.4
CDC42BPA-205ENST00000366769 TGP01266 2768 aa6.88□□□□□ -1.31
CDC42BPA-205ENST00000366769 TENM3Q9P273 2699 aa6.85□□□□□ -1.31
CDC42BPA-205ENST00000366769 Q6ZR54 194 aa6.85□□□□□ -1.31
CDC42BPA-205ENST00000366769 ROMO1P60602 79 aa6.85□□□□□ -1.31
CDC42BPA-205ENST00000366769 Q5W150 140 aa6.84□□□□□ -1.31
CDC42BPA-205ENST00000366769 PRUNE2Q8WUY3 3088 aa6.83□□□□□ -1.32
CDC42BPA-205ENST00000366769 FRYLO94915 3013 aa6.83□□□□□ -1.32
CDC42BPA-205ENST00000366769 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
CDC42BPA-205ENST00000366769 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
CDC42BPA-205ENST00000366769 CRYBG3Q68DQ2 2970 aa6.82□□□□□ -1.32
CDC42BPA-205ENST00000366769 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-205ENST00000366769 C19orf73Q9NVV2 129 aa6.82□□□□□ -1.32
CDC42BPA-205ENST00000366769 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-205ENST00000366769 TNP2Q05952 138 aa6.8□□□□□ -1.32
CDC42BPA-205ENST00000366769 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
CDC42BPA-205ENST00000366769 M0QZ58 72 aa6.76□□□□□ -1.33
CDC42BPA-205ENST00000366769 FREM2Q5SZK8 3169 aa6.76□□□□□ -1.33
CDC42BPA-205ENST00000366769 ZFHX3Q15911 3703 aa6.75□□□□□ -1.33
CDC42BPA-205ENST00000366769 Q5VSD8 79 aa6.74□□□□□ -1.33
CDC42BPA-205ENST00000366769 TENM1Q9UKZ4 2725 aa6.74□□□□□ -1.33
CDC42BPA-205ENST00000366769 GOLGB1Q14789 3259 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-205ENST00000366769 FBN2P35556 2912 aa6.73□□□□□ -1.33
CDC42BPA-205ENST00000366769 VPS13AQ96RL7 3174 aa6.72□□□□□ -1.33
CDC42BPA-205ENST00000366769 KRTAP10-3P60369 221 aa6.72□□□□□ -1.33
CDC42BPA-205ENST00000366769 LINC00472Q9H8W2 130 aa6.71□□□□□ -1.34
CDC42BPA-205ENST00000366769 UTRNP46939 3433 aa6.7□□□□□ -1.34
CDC42BPA-205ENST00000366769 COL12A1Q99715 3063 aa6.69□□□□□ -1.34
CDC42BPA-205ENST00000366769 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-205ENST00000366769 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-205ENST00000366769 A8MUU9 505 aa6.68□□□□□ -1.34
CDC42BPA-205ENST00000366769 HRNRQ86YZ3 2850 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-205ENST00000366769 MXRA5Q9NR99 2828 aa6.65□□□□□ -1.34
CDC42BPA-205ENST00000366769 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
CDC42BPA-205ENST00000366769 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
CDC42BPA-205ENST00000366769 DMXL2Q8TDJ6 3036 aa6.62□□□□□ -1.35
CDC42BPA-205ENST00000366769 ZZEF1O43149 2961 aa6.62□□□□□ -1.35
CDC42BPA-205ENST00000366769 KRTAP29-1A8MX34 341 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-205ENST00000366769 LCE6AA0A183 80 aa6.61□□□□□ -1.35
CDC42BPA-205ENST00000366769 DCHS2Q6V1P9 2916 aa6.58□□□□□ -1.36
CDC42BPA-205ENST00000366769 TNRC18O15417 2968 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-205ENST00000366769 RANBP2P49792 3224 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-205ENST00000366769 LAMA1P25391 3075 aa6.57□□□□□ -1.36
CDC42BPA-205ENST00000366769 VWFP04275 2813 aa6.54□□□□□ -1.36
CDC42BPA-205ENST00000366769 A0A087X002 238 aa6.52□□□□□ -1.37
CDC42BPA-205ENST00000366769 NOTCH2NLQ7Z3S9 236 aa6.52□□□□□ -1.37
CDC42BPA-205ENST00000366769 SPRR1AP35321 89 aa6.52□□□□□ -1.37
CDC42BPA-205ENST00000366769 PANO1I0J062 215 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms