RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SCAPERQ9BY12 1400 aa-3.65□□□□□ -2.99
RNU6-238P-201ENST00000363313 SMARCA2P51531 1590 aa-3.65□□□□□ -2.99
RNU6-238P-201ENST00000363313 TEX14Q8IWB6 1497 aa-3.67□□□□□ -3
RNU6-238P-201ENST00000363313 NAP1L6A6NFF2 107 aa-3.67□□□□□ -3
RNU6-238P-201ENST00000363313 APOC2P02655 101 aa-3.67□□□□□ -3
RNU6-238P-201ENST00000363313 CGREF1Q99674 301 aa-3.67□□□□□ -3
RNU6-238P-201ENST00000363313 NWD1Q149M9 1564 aa-3.68□□□□□ -3
RNU6-238P-201ENST00000363313 NBEAP1P0C6P0 100 aa-3.68□□□□□ -3
RNU6-238P-201ENST00000363313 TSTD1Q8NFU3 115 aa-3.68□□□□□ -3
RNU6-238P-201ENST00000363313 C1orf54Q8WWF1 131 aa-3.68□□□□□ -3
RNU6-238P-201ENST00000363313 DPH3P1Q9H4G8 78 aa-3.68□□□□□ -3
RNU6-238P-201ENST00000363313 LRRC7Q96NW7 1537 aa-3.69□□□□□ -3
RNU6-238P-201ENST00000363313 RGPD1P0DJD0 1748 aa-3.69□□□□□ -3
RNU6-238P-201ENST00000363313 CRYM-AS1A6NIL9 109 aa-3.7□□□□□ -3
RNU6-238P-201ENST00000363313 OOSP1A8MZH6 123 aa-3.7□□□□□ -3
RNU6-238P-201ENST00000363313 CKS1BP61024 79 aa-3.7□□□□□ -3
RNU6-238P-201ENST00000363313 DR1Q01658 176 aa-3.7□□□□□ -3
RNU6-238P-201ENST00000363313 WT1-ASQ06250 92 aa-3.7□□□□□ -3
RNU6-238P-201ENST00000363313 MYH4Q9Y623 1939 aa-3.71□□□□□ -3
RNU6-238P-201ENST00000363313 TRBV25-1A0A075B6N4 114 aa-3.71□□□□□ -3
RNU6-238P-201ENST00000363313 ATP5EP56381 51 aaPredicted RBP-3.71□□□□□ -3
RNU6-238P-201ENST00000363313 SUPT6HQ7KZ85 1726 aaKnown RBP-3.71□□□□□ -3
RNU6-238P-201ENST00000363313 EIF4G3O43432 1585 aaKnown RBP-3.72□□□□□ -3
RNU6-238P-201ENST00000363313 CHD1O14646 1710 aa-3.72□□□□□ -3
RNU6-238P-201ENST00000363313 MEIG1Q5JSS6 88 aa-3.72□□□□□ -3
RNU6-238P-201ENST00000363313 ITSN2Q9NZM3 1697 aa-3.72□□□□□ -3.01
RNU6-238P-201ENST00000363313 LCE6AA0A183 80 aa-3.73□□□□□ -3.01
RNU6-238P-201ENST00000363313 PMCHL1Q16048 86 aa-3.73□□□□□ -3.01
RNU6-238P-201ENST00000363313 GAFA1Q96PS6 74 aa-3.73□□□□□ -3.01
RNU6-238P-201ENST00000363313 POLR1AO95602 1720 aaPredicted RBP-3.73□□□□□ -3.01
RNU6-238P-201ENST00000363313 FOCADQ5VW36 1801 aa-3.74□□□□□ -3.01
RNU6-238P-201ENST00000363313 TMEM218A2RU14 115 aa-3.74□□□□□ -3.01
RNU6-238P-201ENST00000363313 CENPFP49454 3210 aa-3.74□□□□□ -3.01
RNU6-238P-201ENST00000363313 PFDN5Q99471 154 aa-3.74□□□□□ -3.01
RNU6-238P-201ENST00000363313 CACFD1Q9UGQ2 172 aa-3.74□□□□□ -3.01
RNU6-238P-201ENST00000363313 ABCC2Q92887 1545 aa-3.75□□□□□ -3.01
RNU6-238P-201ENST00000363313 FABP1P07148 127 aa-3.75□□□□□ -3.01
RNU6-238P-201ENST00000363313 ASPMQ8IZT6 3477 aa-3.75□□□□□ -3.01
RNU6-238P-201ENST00000363313 ANKRD36BQ8N2N9 1353 aa-3.76□□□□□ -3.01
RNU6-238P-201ENST00000363313 TMEM131LA2VDJ0 1609 aa-3.76□□□□□ -3.01
RNU6-238P-201ENST00000363313 LEPROTL1O95214 131 aa-3.76□□□□□ -3.01
RNU6-238P-201ENST00000363313 ALKAL2Q6UX46 152 aa-3.76□□□□□ -3.01
RNU6-238P-201ENST00000363313 DOT1LQ8TEK3 1739 aa-3.77□□□□□ -3.01
RNU6-238P-201ENST00000363313 ARPC4P59998 168 aa-3.77□□□□□ -3.01
RNU6-238P-201ENST00000363313 NOP10Q9NPE3 64 aaKnown RBP-3.77□□□□□ -3.01
RNU6-238P-201ENST00000363313 BAZ1AQ9NRL2 1556 aaPredicted RBP-3.77□□□□□ -3.01
RNU6-238P-201ENST00000363313 CC2D2AQ9P2K1 1620 aa-3.77□□□□□ -3.01
RNU6-238P-201ENST00000363313 A0A1B0GUL6 1792 aa-3.78□□□□□ -3.01
RNU6-238P-201ENST00000363313 A8MTW9 85 aa-3.78□□□□□ -3.01
RNU6-238P-201ENST00000363313 D6R8Y8 96 aa-3.78□□□□□ -3.01
RNU6-238P-201ENST00000363313 SMIM15Q7Z3B0 74 aa-3.78□□□□□ -3.01
RNU6-238P-201ENST00000363313 MUSTN1Q8IVN3 82 aa-3.78□□□□□ -3.01
RNU6-238P-201ENST00000363313 KIF1AQ12756 1690 aa-3.78□□□□□ -3.02
RNU6-238P-201ENST00000363313 FAM24AA6NFZ4 105 aa-3.79□□□□□ -3.02
RNU6-238P-201ENST00000363313 SPART-AS1P0CW21 52 aa-3.79□□□□□ -3.02
RNU6-238P-201ENST00000363313 PLCH1Q4KWH8 1693 aa-3.8□□□□□ -3.02
RNU6-238P-201ENST00000363313 LTN1O94822 1766 aa-3.8□□□□□ -3.02
RNU6-238P-201ENST00000363313 M0QZ58 72 aa-3.8□□□□□ -3.02
RNU6-238P-201ENST00000363313 MT-ATP8P03928 68 aa-3.8□□□□□ -3.02
RNU6-238P-201ENST00000363313 HMGN3Q15651 99 aa-3.8□□□□□ -3.02
RNU6-238P-201ENST00000363313 KTN1Q86UP2 1357 aaKnown RBP-3.8□□□□□ -3.02
RNU6-238P-201ENST00000363313 DDX60LQ5H9U9 1706 aaKnown RBP-3.81□□□□□ -3.02
RNU6-238P-201ENST00000363313 IQCF6A8MYZ5 107 aa-3.81□□□□□ -3.02
RNU6-238P-201ENST00000363313 KRTDAPP60985 99 aa-3.81□□□□□ -3.02
RNU6-238P-201ENST00000363313 DEFB136Q30KP8 78 aa-3.81□□□□□ -3.02
RNU6-238P-201ENST00000363313 ZNF436-AS1Q8NC38 126 aaPredicted RBP-3.81□□□□□ -3.02
RNU6-238P-201ENST00000363313 BRCA2P51587 3418 aa-3.81□□□□□ -3.02
RNU6-238P-201ENST00000363313 UQCRHP07919 91 aa-3.82□□□□□ -3.02
RNU6-238P-201ENST00000363313 NRXN1Q9ULB1 1477 aa-3.82□□□□□ -3.02
RNU6-238P-201ENST00000363313 ARHGAP5Q13017 1502 aa-3.83□□□□□ -3.02
RNU6-238P-201ENST00000363313 MLH3Q9UHC1 1453 aa-3.83□□□□□ -3.02
RNU6-238P-201ENST00000363313 RAPGEF2Q9Y4G8 1499 aa-3.83□□□□□ -3.02
RNU6-238P-201ENST00000363313 S100PP25815 95 aa-3.83□□□□□ -3.02
RNU6-238P-201ENST00000363313 ITSN1Q15811 1721 aa-3.84□□□□□ -3.02
RNU6-238P-201ENST00000363313 A0A1B0GUT8 65 aa-3.85□□□□□ -3.03
RNU6-238P-201ENST00000363313 GNG14A0A1W2PPG7 69 aa-3.85□□□□□ -3.03
RNU6-238P-201ENST00000363313 hADV29S1A0JD25 119 aa-3.85□□□□□ -3.03
RNU6-238P-201ENST00000363313 MPC2O95563 127 aa-3.85□□□□□ -3.03
RNU6-238P-201ENST00000363313 ACYP1P07311 99 aa-3.85□□□□□ -3.03
RNU6-238P-201ENST00000363313 ZC3H13Q5T200 1668 aaKnown RBP-3.85□□□□□ -3.03
RNU6-238P-201ENST00000363313 KIAA0586Q9BVV6 1533 aa-3.85□□□□□ -3.03
RNU6-238P-201ENST00000363313 RPS27P42677 84 aaKnown RBP-3.86□□□□□ -3.03
RNU6-238P-201ENST00000363313 RPS27LQ71UM5 84 aaKnown RBP-3.86□□□□□ -3.03
RNU6-238P-201ENST00000363313 PAIP2BQ9ULR5 123 aaKnown RBP-3.86□□□□□ -3.03
RNU6-238P-201ENST00000363313 NAIPQ13075 1403 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 DNMBPQ6XZF7 1577 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 TRAV21A0A0B4J279 112 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 FAM25AB3EWG3 89 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 FAM25CB3EWG5 89 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 FAM25GB3EWG6 89 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 H3BQ15 152 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 NDUFC1O43677 76 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 ETDBQ3ZM63 59 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 BVES-AS1Q5T3Y7 98 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 LRRIQ1Q96JM4 1722 aa-3.87□□□□□ -3.03
RNU6-238P-201ENST00000363313 PLIN4Q96Q06 1357 aa-3.88□□□□□ -3.03
RNU6-238P-201ENST00000363313 H3BUA1 57 aa-3.88□□□□□ -3.03
RNU6-238P-201ENST00000363313 M0QY20 66 aa-3.88□□□□□ -3.03
RNU6-238P-201ENST00000363313 ABCA3Q99758 1704 aa-3.89□□□□□ -3.03
RNU6-238P-201ENST00000363313 SPHKAPQ2M3C7 1700 aa-3.9□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms