RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 A0A0U1RQV5 110 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 A0A1B0GUT8 65 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 MIF4GDA9UHW6 222 aaKnown RBP-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 FTCDNL1E5RQL4 147 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 PDCD5O14737 125 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 FTH1P02794 183 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 LINC00614P0C842 121 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 SMIM17P0DL12 118 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 CCL1P22362 96 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 PMAIP1Q13794 54 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 S100A7L2Q5SY68 101 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 PTRHD1Q6GMV3 140 aaKnown RBP-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 LINC00470Q9BZP3 86 aa-2.78□□□□□ -2.85
RNU6-228P-201ENST00000362700 EPRSP07814 1512 aaKnown RBP-2.78□□□□□ -2.86
RNU6-228P-201ENST00000362700 SYCP2Q9BX26 1530 aa-2.78□□□□□ -2.86
RNU6-228P-201ENST00000362700 AKAP12Q02952 1782 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 LCN1P31025 176 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 NAA20P61599 178 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 YWHAHQ04917 246 aaPredicted RBP-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 SMCO1Q147U7 214 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 PPP1R2P3Q6NXS1 205 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 ULK3Q6PHR2 472 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 UQCC3Q6UW78 93 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 CCDC83Q8IWF9 413 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 CAPSLQ8WWF8 208 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 ATP6V1E2Q96A05 226 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 SMIM19Q96E16 107 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 BORCS8Q96FH0 119 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 HPF1Q9NWY4 346 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 Q9Y3F1 56 aa-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 FAM32AQ9Y421 112 aaKnown RBP-2.79□□□□□ -2.86
RNU6-228P-201ENST00000362700 A0A1B0GV50 99 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 FAM240BA0A1B0GVZ2 78 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 CYB5AP00167 134 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 HMGN2P05204 90 aaKnown RBP-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 APOA4P06727 396 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 G0S2P27469 103 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 SDC2P34741 201 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 Q56UQ5 140 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 FAM24BQ8N5W8 94 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 DYDC1Q8WWB3 177 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 CCDC115Q96NT0 180 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 AHSPQ9NZD4 102 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 PIN4Q9Y237 131 aaKnown RBP-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 NAIPQ13075 1403 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 ABCC2Q92887 1545 aa-2.8□□□□□ -2.86
RNU6-228P-201ENST00000362700 CXCL11O14625 94 aa-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 SSNA1O43805 119 aa-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 TNFAIP8O95379 198 aa-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 HIST1H1BP16401 226 aaKnown RBP-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 SRP9P49458 86 aaKnown RBP-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 NREPQ16612 68 aa-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 NCMAPQ5T1S8 102 aa-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 TCEAL4Q96EI5 215 aa-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 HSPB11Q9Y547 144 aa-2.81□□□□□ -2.86
RNU6-228P-201ENST00000362700 TOP2AP11388 1531 aaKnown RBP-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 DBIP07108 87 aaKnown RBP-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 OCM2P0CE71 109 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 RANBP1P43487 201 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 YWHAEP62258 255 aaKnown RBP-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 DEFB114Q30KQ6 69 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 CENPQQ7L2Z9 268 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 LINC00308Q8TCZ7 52 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 SMIM12Q96EX1 92 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 COX14Q96I36 57 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 SAR1AQ9NR31 198 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 TMEM167BQ9NRX6 74 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 GUCA1BQ9UMX6 200 aa-2.82□□□□□ -2.86
RNU6-228P-201ENST00000362700 A0A0U1RRA0 63 aa-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 TNNT2P45379 298 aaPredicted RBP-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 CBX3Q13185 183 aa-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 TMEM97Q5BJF2 176 aa-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 CCDC122Q5T0U0 273 aa-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 CCDC70Q6NSX1 233 aa-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 TMCO2Q7Z6W1 182 aaPredicted RBP-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 PFDN4Q9NQP4 134 aa-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 C1orf109Q9NX04 203 aa-2.83□□□□□ -2.86
RNU6-228P-201ENST00000362700 CASQ2O14958 399 aaPredicted RBP-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 CETN3O15182 167 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 FABP7O15540 132 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 S100A6P06703 90 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 PPP1R2P41236 205 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 PSME3P61289 254 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 RPL31P62899 125 aaKnown RBP-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 SELENOWP63302 87 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 SPTSSAQ969W0 71 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 CHMP4AQ9BY43 222 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 MANBALQ9NQG1 85 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 ABCA8O94911 1581 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 MROH2BQ7Z745 1585 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 EFCAB6Q5THR3 1501 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 ABCA10Q8WWZ4 1543 aa-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 AQRO60306 1485 aaKnown RBP eCLIP-2.84□□□□□ -2.86
RNU6-228P-201ENST00000362700 CLTCL1P53675 1640 aa-2.85□□□□□ -2.87
RNU6-228P-201ENST00000362700 A0A1B0GV72 72 aa-2.85□□□□□ -2.87
RNU6-228P-201ENST00000362700 IQCF5A8MTL0 148 aa-2.85□□□□□ -2.87
RNU6-228P-201ENST00000362700 UMAD1C9J7I0 102 aa-2.85□□□□□ -2.87
RNU6-228P-201ENST00000362700 NDUFB6O95139 128 aa-2.85□□□□□ -2.87
RNU6-228P-201ENST00000362700 TNNC1P63316 161 aa-2.85□□□□□ -2.87
RNU6-228P-201ENST00000362700 PLGLAQ15195 96 aa-2.85□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms