RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ST20-AS1Q8NBB2 130 aa12.18□□□□□ -0.46
CMTM3-201ENST00000361909 PSPHP1O15172 72 aa12.17□□□□□ -0.46
CMTM3-201ENST00000361909 DNAH9Q9NYC9 4486 aa12.17□□□□□ -0.46
CMTM3-201ENST00000361909 COL7A1Q02388 2944 aa12.16□□□□□ -0.46
CMTM3-201ENST00000361909 IGKV2D-24A0A075B6R9 120 aa12.15□□□□□ -0.47
CMTM3-201ENST00000361909 DNAH10OSP0CZ25 163 aa12.15□□□□□ -0.47
CMTM3-201ENST00000361909 LINC00588Q9Y4M8 146 aa12.13□□□□□ -0.47
CMTM3-201ENST00000361909 DNHD1Q96M86 4753 aa12.12□□□□□ -0.47
CMTM3-201ENST00000361909 UBE2BP63146 152 aa12.12□□□□□ -0.47
CMTM3-201ENST00000361909 LIMD2Q9BT23 127 aa12.12□□□□□ -0.47
CMTM3-201ENST00000361909 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
CMTM3-201ENST00000361909 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
CMTM3-201ENST00000361909 RPL37AP8A6NKH3 93 aa12.1□□□□□ -0.47
CMTM3-201ENST00000361909 UBE2AP49459 152 aa12.1□□□□□ -0.47
CMTM3-201ENST00000361909 STAB2Q8WWQ8 2551 aa12.1□□□□□ -0.47
CMTM3-201ENST00000361909 A8MUN3 132 aa12.09□□□□□ -0.47
CMTM3-201ENST00000361909 Q5VV11 94 aa12.08□□□□□ -0.48
CMTM3-201ENST00000361909 IGLV8-61A0A075B6I0 122 aa12.08□□□□□ -0.48
CMTM3-201ENST00000361909 PRR4Q16378 134 aa12.07□□□□□ -0.48
CMTM3-201ENST00000361909 APLNQ9ULZ1 77 aa12.07□□□□□ -0.48
CMTM3-201ENST00000361909 NUPR2A6NF83 97 aa12.06□□□□□ -0.48
CMTM3-201ENST00000361909 LINC00208Q96KT6 92 aa12.06□□□□□ -0.48
CMTM3-201ENST00000361909 CD164Q04900 197 aa12.06□□□□□ -0.48
CMTM3-201ENST00000361909 KRTAP29-1A8MX34 341 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-201ENST00000361909 IGFL1Q6UW32 110 aa12.04□□□□□ -0.48
CMTM3-201ENST00000361909 REG3GQ6UW15 175 aa12.03□□□□□ -0.48
CMTM3-201ENST00000361909 WFDC13Q8IUB5 93 aa12.03□□□□□ -0.48
CMTM3-201ENST00000361909 MEGF8Q7Z7M0 2845 aa12.02□□□□□ -0.48
CMTM3-201ENST00000361909 H0Y9P7 68 aa12.02□□□□□ -0.49
CMTM3-201ENST00000361909 Q8N9P0 234 aaPredicted RBP12.02□□□□□ -0.49
CMTM3-201ENST00000361909 FAM168BA1KXE4 195 aa12.01□□□□□ -0.49
CMTM3-201ENST00000361909 PRKDCP78527 4128 aaKnown RBP11.99□□□□□ -0.49
CMTM3-201ENST00000361909 KRTAP7-1Q8IUC3 87 aa11.99□□□□□ -0.49
CMTM3-201ENST00000361909 CASC2Q6XLA1 102 aa11.98□□□□□ -0.49
CMTM3-201ENST00000361909 A0A087WSZ3 146 aa11.97□□□□□ -0.49
CMTM3-201ENST00000361909 CHKB-CPT1BH3BT56 60 aa11.96□□□□□ -0.49
CMTM3-201ENST00000361909 Q75L30 129 aa11.96□□□□□ -0.5
CMTM3-201ENST00000361909 C9orf163Q8N9P6 203 aa11.96□□□□□ -0.5
CMTM3-201ENST00000361909 UBE2DNLQ8IWF7 75 aa11.95□□□□□ -0.5
CMTM3-201ENST00000361909 LOC101927531A0A1B0GV80 90 aa11.94□□□□□ -0.5
CMTM3-201ENST00000361909 KTN1-AS1Q86SY8 53 aa11.94□□□□□ -0.5
CMTM3-201ENST00000361909 DYNC2H1Q8NCM8 4307 aaKnown RBP11.93□□□□□ -0.5
CMTM3-201ENST00000361909 ATP11AUNQ6ZP68 121 aa11.93□□□□□ -0.5
CMTM3-201ENST00000361909 PRR15LQ9BU68 103 aa11.93□□□□□ -0.5
CMTM3-201ENST00000361909 A8MWP4 228 aa11.92□□□□□ -0.5
CMTM3-201ENST00000361909 C16orf90A8MZG2 172 aa11.9□□□□□ -0.5
CMTM3-201ENST00000361909 DEFB116Q30KQ4 102 aa11.89□□□□□ -0.51
CMTM3-201ENST00000361909 CNBPP62633 177 aaKnown RBP11.89□□□□□ -0.51
CMTM3-201ENST00000361909 CSMD3Q7Z407 3707 aa11.88□□□□□ -0.51
CMTM3-201ENST00000361909 IGLV7-46A0A075B6I9 117 aa11.87□□□□□ -0.51
CMTM3-201ENST00000361909 NDUFS5O43920 106 aa11.87□□□□□ -0.51
CMTM3-201ENST00000361909 DNAH7Q8WXX0 4024 aa11.86□□□□□ -0.51
CMTM3-201ENST00000361909 RPL37AP61513 92 aaKnown RBP11.85□□□□□ -0.51
CMTM3-201ENST00000361909 COA5Q86WW8 74 aa11.85□□□□□ -0.51
CMTM3-201ENST00000361909 SPRR1BP22528 89 aa11.85□□□□□ -0.51
CMTM3-201ENST00000361909 KRTAP1-5Q9BYS1 174 aa11.85□□□□□ -0.51
CMTM3-201ENST00000361909 LINC00472Q9H8W2 130 aa11.85□□□□□ -0.51
CMTM3-201ENST00000361909 A0A0G2JQZ4 141 aa11.83□□□□□ -0.52
CMTM3-201ENST00000361909 A0A1W2PNN7 141 aa11.83□□□□□ -0.52
CMTM3-201ENST00000361909 A8MU10 97 aa11.82□□□□□ -0.52
CMTM3-201ENST00000361909 FBN3Q75N90 2809 aa11.82□□□□□ -0.52
CMTM3-201ENST00000361909 A6NED7 52 aa11.81□□□□□ -0.52
CMTM3-201ENST00000361909 CDC42SE1Q9NRR8 79 aa11.81□□□□□ -0.52
CMTM3-201ENST00000361909 NBDYA0A0U1RRE5 68 aa11.81□□□□□ -0.52
CMTM3-201ENST00000361909 PHF5AQ7RTV0 110 aaKnown RBP11.8□□□□□ -0.52
CMTM3-201ENST00000361909 H0Y9J4 135 aa11.79□□□□□ -0.52
CMTM3-201ENST00000361909 PRLHP81277 87 aa11.79□□□□□ -0.52
CMTM3-201ENST00000361909 CASC10Q5T4H9 136 aa11.79□□□□□ -0.52
CMTM3-201ENST00000361909 TP53AIP1Q9HCN2 124 aa11.79□□□□□ -0.52
CMTM3-201ENST00000361909 LCA10Q71F78 164 aa11.79□□□□□ -0.52
CMTM3-201ENST00000361909 WWC2-AS2Q96NR7 200 aa11.78□□□□□ -0.52
CMTM3-201ENST00000361909 DNAH1Q9P2D7 4330 aa11.78□□□□□ -0.52
CMTM3-201ENST00000361909 MMP24-AS1A0A0U1RRL7 71 aa11.77□□□□□ -0.53
CMTM3-201ENST00000361909 A6NN06 94 aa11.77□□□□□ -0.53
CMTM3-201ENST00000361909 SPTSSBQ8NFR3 76 aa11.77□□□□□ -0.53
CMTM3-201ENST00000361909 LYSTQ99698 3801 aa11.77□□□□□ -0.53
CMTM3-201ENST00000361909 LINC01558Q9Y6Z2 57 aa11.77□□□□□ -0.53
CMTM3-201ENST00000361909 PLECQ15149 4684 aaKnown RBP11.75□□□□□ -0.53
CMTM3-201ENST00000361909 PLAC8Q9NZF1 115 aa11.75□□□□□ -0.53
CMTM3-201ENST00000361909 STARD9Q9P2P6 4700 aa11.74□□□□□ -0.53
CMTM3-201ENST00000361909 TENM2Q9NT68 2774 aa11.74□□□□□ -0.53
CMTM3-201ENST00000361909 MOBPQ13875 183 aa11.73□□□□□ -0.53
CMTM3-201ENST00000361909 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
CMTM3-201ENST00000361909 RBM12B-AS1Q9P1G2 102 aa11.71□□□□□ -0.53
CMTM3-201ENST00000361909 ASB16-AS1Q495Z4 193 aa11.71□□□□□ -0.54
CMTM3-201ENST00000361909 A0A096LNI7 61 aa11.69□□□□□ -0.54
CMTM3-201ENST00000361909 Q6ZR54 194 aa11.69□□□□□ -0.54
CMTM3-201ENST00000361909 Q6ZRN7 208 aaPredicted RBP11.68□□□□□ -0.54
CMTM3-201ENST00000361909 C7orf65Q6ZTY9 151 aa11.67□□□□□ -0.54
CMTM3-201ENST00000361909 VPS13DQ5THJ4 4388 aa11.64□□□□□ -0.55
CMTM3-201ENST00000361909 IGKV2-24A0A0C4DH68 120 aa11.62□□□□□ -0.55
CMTM3-201ENST00000361909 TGP01266 2768 aa11.61□□□□□ -0.55
CMTM3-201ENST00000361909 PCOTHQ58A44 107 aa11.6□□□□□ -0.55
CMTM3-201ENST00000361909 LY6G6CO95867 125 aa11.59□□□□□ -0.55
CMTM3-201ENST00000361909 SPAG11AQ6PDA7 123 aa11.59□□□□□ -0.55
CMTM3-201ENST00000361909 C8orf17Q9NRJ1 99 aa11.58□□□□□ -0.56
CMTM3-201ENST00000361909 Q96NJ1 140 aa11.56□□□□□ -0.56
CMTM3-201ENST00000361909 DNAH10Q8IVF4 4471 aa11.54□□□□□ -0.56
CMTM3-201ENST00000361909 HRES1P13985 223 aa11.54□□□□□ -0.56
CMTM3-201ENST00000361909 C1orf134Q5TEV5 83 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms