RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 GCN1Q92616 2671 aaKnown RBP6.98□□□□□ -1.29
TMC3-201ENST00000359440 NBEAQ8NFP9 2946 aa6.97□□□□□ -1.29
TMC3-201ENST00000359440 LCE6AA0A183 80 aa6.97□□□□□ -1.29
TMC3-201ENST00000359440 PRUNE2Q8WUY3 3088 aa6.97□□□□□ -1.29
TMC3-201ENST00000359440 ANAPC11Q9NYG5 84 aa6.96□□□□□ -1.3
TMC3-201ENST00000359440 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
TMC3-201ENST00000359440 LINC00304Q8N9R0 145 aa6.95□□□□□ -1.3
TMC3-201ENST00000359440 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
TMC3-201ENST00000359440 MGAM2Q2M2H8 2515 aa6.94□□□□□ -1.3
TMC3-201ENST00000359440 LAMA1P25391 3075 aa6.94□□□□□ -1.3
TMC3-201ENST00000359440 CDH23Q9H251 3354 aa6.93□□□□□ -1.3
TMC3-201ENST00000359440 HRES1P13985 223 aa6.93□□□□□ -1.3
TMC3-201ENST00000359440 WWC2-AS2Q96NR7 200 aa6.93□□□□□ -1.3
TMC3-201ENST00000359440 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
TMC3-201ENST00000359440 FLNBO75369 2602 aaKnown RBP6.93□□□□□ -1.3
TMC3-201ENST00000359440 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
TMC3-201ENST00000359440 XIRP2A4UGR9 3374 aa6.92□□□□□ -1.3
TMC3-201ENST00000359440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.91□□□□□ -1.3
TMC3-201ENST00000359440 UNC79Q9P2D8 2635 aa6.91□□□□□ -1.3
TMC3-201ENST00000359440 Q6ZR54 194 aa6.91□□□□□ -1.3
TMC3-201ENST00000359440 DNAH14Q0VDD8 3507 aa6.9□□□□□ -1.3
TMC3-201ENST00000359440 MAST4O15021 2626 aa6.9□□□□□ -1.31
TMC3-201ENST00000359440 LINC00483Q53H64 154 aa6.87□□□□□ -1.31
TMC3-201ENST00000359440 VCANP13611 3396 aa6.86□□□□□ -1.31
TMC3-201ENST00000359440 TEX15Q9BXT5 2789 aa6.86□□□□□ -1.31
TMC3-201ENST00000359440 ASB16-AS1Q495Z4 193 aa6.85□□□□□ -1.31
TMC3-201ENST00000359440 MAP1AP78559 2803 aaPredicted RBP6.84□□□□□ -1.31
TMC3-201ENST00000359440 IGSF10Q6WRI0 2623 aa6.84□□□□□ -1.31
TMC3-201ENST00000359440 KALRNO60229 2985 aa6.83□□□□□ -1.32
TMC3-201ENST00000359440 Q5W150 140 aa6.83□□□□□ -1.32
TMC3-201ENST00000359440 KRTAP1-5Q9BYS1 174 aa6.83□□□□□ -1.32
TMC3-201ENST00000359440 SETXQ7Z333 2677 aaKnown RBP6.82□□□□□ -1.32
TMC3-201ENST00000359440 SPINK7P58062 85 aa6.82□□□□□ -1.32
TMC3-201ENST00000359440 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
TMC3-201ENST00000359440 NBEAL2Q6ZNJ1 2754 aa6.82□□□□□ -1.32
TMC3-201ENST00000359440 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
TMC3-201ENST00000359440 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
TMC3-201ENST00000359440 Q8N1X5 172 aa6.8□□□□□ -1.32
TMC3-201ENST00000359440 REV3LO60673 3130 aa6.8□□□□□ -1.32
TMC3-201ENST00000359440 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
TMC3-201ENST00000359440 ADGRG4Q8IZF6 3080 aa6.79□□□□□ -1.32
TMC3-201ENST00000359440 A0A1B0GU33 70 aa6.77□□□□□ -1.33
TMC3-201ENST00000359440 EYSQ5T1H1 3165 aa6.77□□□□□ -1.33
TMC3-201ENST00000359440 SZT2Q5T011 3432 aa6.77□□□□□ -1.33
TMC3-201ENST00000359440 SPEGQ15772 3267 aa6.76□□□□□ -1.33
TMC3-201ENST00000359440 MYO15AQ9UKN7 3530 aa6.75□□□□□ -1.33
TMC3-201ENST00000359440 TEP1Q99973 2627 aaKnown RBP6.75□□□□□ -1.33
TMC3-201ENST00000359440 C9orf92A6NGG3 77 aa6.75□□□□□ -1.33
TMC3-201ENST00000359440 CELSR3Q9NYQ7 3312 aa6.75□□□□□ -1.33
TMC3-201ENST00000359440 FRYLO94915 3013 aa6.73□□□□□ -1.33
TMC3-201ENST00000359440 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
TMC3-201ENST00000359440 FLNCQ14315 2725 aa6.73□□□□□ -1.33
TMC3-201ENST00000359440 LRBAP50851 2863 aa6.72□□□□□ -1.33
TMC3-201ENST00000359440 ITPR1Q14643 2758 aa6.7□□□□□ -1.34
TMC3-201ENST00000359440 NBEAL1Q6ZS30 2694 aa6.69□□□□□ -1.34
TMC3-201ENST00000359440 NOTCH1P46531 2555 aa6.69□□□□□ -1.34
TMC3-201ENST00000359440 PRAC1Q96KF2 57 aa6.68□□□□□ -1.34
TMC3-201ENST00000359440 ATMQ13315 3056 aa6.68□□□□□ -1.34
TMC3-201ENST00000359440 A6NN06 94 aa6.67□□□□□ -1.34
TMC3-201ENST00000359440 UBR5O95071 2799 aaPredicted RBP6.67□□□□□ -1.34
TMC3-201ENST00000359440 TACC2O95359 2948 aa6.67□□□□□ -1.34
TMC3-201ENST00000359440 SPTBN5Q9NRC6 3674 aaKnown RBP6.67□□□□□ -1.34
TMC3-201ENST00000359440 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
TMC3-201ENST00000359440 BOD1L1Q8NFC6 3051 aa6.66□□□□□ -1.34
TMC3-201ENST00000359440 KRTAP13-1Q8IUC0 172 aa6.65□□□□□ -1.34
TMC3-201ENST00000359440 ZZEF1O43149 2961 aa6.65□□□□□ -1.34
TMC3-201ENST00000359440 PANO1I0J062 215 aa6.64□□□□□ -1.35
TMC3-201ENST00000359440 KMT2BQ9UMN6 2715 aaPredicted RBP6.64□□□□□ -1.35
TMC3-201ENST00000359440 COL6A5A8TX70 2615 aa6.63□□□□□ -1.35
TMC3-201ENST00000359440 CSAG1Q6PB30 78 aa6.62□□□□□ -1.35
TMC3-201ENST00000359440 A0A087X002 238 aa6.62□□□□□ -1.35
TMC3-201ENST00000359440 SMR3BP02814 79 aaPredicted RBP6.61□□□□□ -1.35
TMC3-201ENST00000359440 KRTAP11-1Q8IUC1 163 aa6.61□□□□□ -1.35
TMC3-201ENST00000359440 HRNRQ86YZ3 2850 aaPredicted RBP6.61□□□□□ -1.35
TMC3-201ENST00000359440 UTP20O75691 2785 aaKnown RBP6.6□□□□□ -1.35
TMC3-201ENST00000359440 FREM2Q5SZK8 3169 aa6.59□□□□□ -1.35
TMC3-201ENST00000359440 NSD1Q96L73 2696 aaPredicted RBP6.59□□□□□ -1.35
TMC3-201ENST00000359440 Q6ZRN7 208 aaPredicted RBP6.59□□□□□ -1.35
TMC3-201ENST00000359440 DMXL2Q8TDJ6 3036 aa6.58□□□□□ -1.36
TMC3-201ENST00000359440 A0A0D9SG42 100 aa6.58□□□□□ -1.36
TMC3-201ENST00000359440 STAB1Q9NY15 2570 aa6.58□□□□□ -1.36
TMC3-201ENST00000359440 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
TMC3-201ENST00000359440 COL6A3P12111 3177 aa6.57□□□□□ -1.36
TMC3-201ENST00000359440 COL12A1Q99715 3063 aa6.57□□□□□ -1.36
TMC3-201ENST00000359440 ITPR2Q14571 2701 aa6.56□□□□□ -1.36
TMC3-201ENST00000359440 TNRC18O15417 2968 aaPredicted RBP6.56□□□□□ -1.36
TMC3-201ENST00000359440 WDFY3Q8IZQ1 3526 aa6.56□□□□□ -1.36
TMC3-201ENST00000359440 RPS29P62273 56 aaKnown RBP6.54□□□□□ -1.36
TMC3-201ENST00000359440 NIPBLQ6KC79 2804 aaeCLIP6.54□□□□□ -1.36
TMC3-201ENST00000359440 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
TMC3-201ENST00000359440 BAHCC1Q9P281 2608 aa6.51□□□□□ -1.37
TMC3-201ENST00000359440 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
TMC3-201ENST00000359440 ZANQ9Y493 2812 aa6.51□□□□□ -1.37
TMC3-201ENST00000359440 APCP25054 2843 aa6.5□□□□□ -1.37
TMC3-201ENST00000359440 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
TMC3-201ENST00000359440 H3BS24 57 aa6.49□□□□□ -1.37
TMC3-201ENST00000359440 ROMO1P60602 79 aa6.48□□□□□ -1.37
TMC3-201ENST00000359440 S4R3F8 94 aa6.48□□□□□ -1.37
TMC3-201ENST00000359440 COX6B2Q6YFQ2 88 aa6.48□□□□□ -1.37
TMC3-201ENST00000359440 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms