RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 Q6ZRX8 168 aa7.42□□□□□ -1.22
CNOT3-202ENST00000358389 Q9BRP9 147 aa7.42□□□□□ -1.22
CNOT3-202ENST00000358389 FAM168BA1KXE4 195 aa7.41□□□□□ -1.22
CNOT3-202ENST00000358389 STAB2Q8WWQ8 2551 aa7.41□□□□□ -1.22
CNOT3-202ENST00000358389 Q8N9P0 234 aaPredicted RBP7.41□□□□□ -1.22
CNOT3-202ENST00000358389 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
CNOT3-202ENST00000358389 CASC2Q6XLA1 102 aa7.4□□□□□ -1.22
CNOT3-202ENST00000358389 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.22
CNOT3-202ENST00000358389 LINC00588Q9Y4M8 146 aa7.4□□□□□ -1.22
CNOT3-202ENST00000358389 ZNF469Q96JG9 3925 aaPredicted RBP7.4□□□□□ -1.23
CNOT3-202ENST00000358389 C15orf56Q8N910 161 aa7.4□□□□□ -1.23
CNOT3-202ENST00000358389 Q8NAQ8 132 aa7.4□□□□□ -1.23
CNOT3-202ENST00000358389 SPAG11AQ6PDA7 123 aa7.39□□□□□ -1.23
CNOT3-202ENST00000358389 IGHV6-1A0A0B4J1U7 121 aa7.38□□□□□ -1.23
CNOT3-202ENST00000358389 LCE6AA0A183 80 aa7.38□□□□□ -1.23
CNOT3-202ENST00000358389 A0A1B0GW54 56 aa7.38□□□□□ -1.23
CNOT3-202ENST00000358389 LINC01556Q5JQF7 62 aa7.37□□□□□ -1.23
CNOT3-202ENST00000358389 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
CNOT3-202ENST00000358389 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
CNOT3-202ENST00000358389 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
CNOT3-202ENST00000358389 COA5Q86WW8 74 aa7.36□□□□□ -1.23
CNOT3-202ENST00000358389 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
CNOT3-202ENST00000358389 LCA10Q71F78 164 aa7.35□□□□□ -1.23
CNOT3-202ENST00000358389 SPRR4Q96PI1 79 aa7.34□□□□□ -1.23
CNOT3-202ENST00000358389 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
CNOT3-202ENST00000358389 CHTF8P0CG12 524 aa7.33□□□□□ -1.24
CNOT3-202ENST00000358389 C1orf134Q5TEV5 83 aa7.32□□□□□ -1.24
CNOT3-202ENST00000358389 IGLV1-50A0A075B6I6 118 aa7.31□□□□□ -1.24
CNOT3-202ENST00000358389 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
CNOT3-202ENST00000358389 TNP2Q05952 138 aa7.3□□□□□ -1.24
CNOT3-202ENST00000358389 IGLV5-52A0A0A0MRZ9 124 aa7.3□□□□□ -1.24
CNOT3-202ENST00000358389 PHF5AQ7RTV0 110 aaKnown RBP7.29□□□□□ -1.24
CNOT3-202ENST00000358389 SPANXA2-OT1Q8N9U9 137 aa7.29□□□□□ -1.24
CNOT3-202ENST00000358389 ZNF706Q9Y5V0 76 aaPredicted RBP7.29□□□□□ -1.24
CNOT3-202ENST00000358389 KRTAP10-3P60369 221 aa7.28□□□□□ -1.24
CNOT3-202ENST00000358389 C7orf65Q6ZTY9 151 aa7.28□□□□□ -1.24
CNOT3-202ENST00000358389 Q75L30 129 aa7.28□□□□□ -1.24
CNOT3-202ENST00000358389 MDFIQ99750 246 aa7.27□□□□□ -1.25
CNOT3-202ENST00000358389 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
CNOT3-202ENST00000358389 VWFP04275 2813 aa7.27□□□□□ -1.25
CNOT3-202ENST00000358389 H3BPC8 53 aa7.26□□□□□ -1.25
CNOT3-202ENST00000358389 KRTAP26-1Q6PEX3 210 aa7.26□□□□□ -1.25
CNOT3-202ENST00000358389 KRTAP1-3Q8IUG1 177 aa7.25□□□□□ -1.25
CNOT3-202ENST00000358389 ANK2Q01484 3957 aa7.25□□□□□ -1.25
CNOT3-202ENST00000358389 SPINK1P00995 79 aa7.24□□□□□ -1.25
CNOT3-202ENST00000358389 CMYA5Q8N3K9 4069 aa7.24□□□□□ -1.25
CNOT3-202ENST00000358389 A6NN06 94 aa7.24□□□□□ -1.25
CNOT3-202ENST00000358389 MOBPQ13875 183 aa7.24□□□□□ -1.25
CNOT3-202ENST00000358389 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
CNOT3-202ENST00000358389 CASC10Q5T4H9 136 aa7.22□□□□□ -1.25
CNOT3-202ENST00000358389 SPINK7P58062 85 aa7.22□□□□□ -1.25
CNOT3-202ENST00000358389 PRAC1Q96KF2 57 aa7.22□□□□□ -1.25
CNOT3-202ENST00000358389 A8MWP4 228 aa7.21□□□□□ -1.25
CNOT3-202ENST00000358389 KRTAP4-16G5E9R7 235 aaPredicted RBP7.21□□□□□ -1.25
CNOT3-202ENST00000358389 H3BNG1 76 aa7.21□□□□□ -1.25
CNOT3-202ENST00000358389 PKD1L1Q8TDX9 2849 aa7.21□□□□□ -1.25
CNOT3-202ENST00000358389 KMT2BQ9UMN6 2715 aaPredicted RBP7.21□□□□□ -1.26
CNOT3-202ENST00000358389 KRTAP1-1Q07627 177 aa7.2□□□□□ -1.26
CNOT3-202ENST00000358389 SPRR1AP35321 89 aa7.2□□□□□ -1.26
CNOT3-202ENST00000358389 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
CNOT3-202ENST00000358389 KRTAP29-1A8MX34 341 aaPredicted RBP7.2□□□□□ -1.26
CNOT3-202ENST00000358389 KRTAP10-11P60412 298 aa7.19□□□□□ -1.26
CNOT3-202ENST00000358389 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
CNOT3-202ENST00000358389 K7EIL1 84 aa7.19□□□□□ -1.26
CNOT3-202ENST00000358389 DNAH1Q9P2D7 4330 aa7.19□□□□□ -1.26
CNOT3-202ENST00000358389 PDZD2O15018 2839 aa7.18□□□□□ -1.26
CNOT3-202ENST00000358389 DNAH10OSP0CZ25 163 aa7.17□□□□□ -1.26
CNOT3-202ENST00000358389 C9orf163Q8N9P6 203 aa7.17□□□□□ -1.26
CNOT3-202ENST00000358389 WWC2-AS2Q96NR7 200 aa7.17□□□□□ -1.26
CNOT3-202ENST00000358389 IGKV2D-30A0A075B6S6 120 aa7.17□□□□□ -1.26
CNOT3-202ENST00000358389 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
CNOT3-202ENST00000358389 PLA2G2DQ9UNK4 145 aa7.16□□□□□ -1.26
CNOT3-202ENST00000358389 LINC01558Q9Y6Z2 57 aa7.15□□□□□ -1.26
CNOT3-202ENST00000358389 TLX1NBP0CAT3 122 aa7.15□□□□□ -1.26
CNOT3-202ENST00000358389 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
CNOT3-202ENST00000358389 SPACA4Q8TDM5 124 aa7.15□□□□□ -1.27
CNOT3-202ENST00000358389 NBDYA0A0U1RRE5 68 aa7.14□□□□□ -1.27
CNOT3-202ENST00000358389 C8orf87E5RJ46 101 aa7.14□□□□□ -1.27
CNOT3-202ENST00000358389 KRTAP7-1Q8IUC3 87 aa7.14□□□□□ -1.27
CNOT3-202ENST00000358389 LINC00313P59037 77 aa7.14□□□□□ -1.27
CNOT3-202ENST00000358389 DNAH3Q8TD57 4116 aa7.12□□□□□ -1.27
CNOT3-202ENST00000358389 IGLV5-37A0A075B6J1 123 aa7.12□□□□□ -1.27
CNOT3-202ENST00000358389 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
CNOT3-202ENST00000358389 SRRM2Q9UQ35 2752 aaKnown RBP7.11□□□□□ -1.27
CNOT3-202ENST00000358389 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
CNOT3-202ENST00000358389 HRES1P13985 223 aa7.11□□□□□ -1.27
CNOT3-202ENST00000358389 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
CNOT3-202ENST00000358389 LINC00472Q9H8W2 130 aa7.1□□□□□ -1.27
CNOT3-202ENST00000358389 ADM2Q7Z4H4 148 aa7.09□□□□□ -1.27
CNOT3-202ENST00000358389 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
CNOT3-202ENST00000358389 H3BS24 57 aa7.07□□□□□ -1.28
CNOT3-202ENST00000358389 RTL8CO15255 209 aa7.07□□□□□ -1.28
CNOT3-202ENST00000358389 TENM1Q9UKZ4 2725 aa7.07□□□□□ -1.28
CNOT3-202ENST00000358389 IGLV8-61A0A075B6I0 122 aa7.07□□□□□ -1.28
CNOT3-202ENST00000358389 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
CNOT3-202ENST00000358389 K7ERS5 55 aa7.06□□□□□ -1.28
CNOT3-202ENST00000358389 C8orf17Q9NRJ1 99 aa7.05□□□□□ -1.28
CNOT3-202ENST00000358389 TRRAPQ9Y4A5 3859 aa7.05□□□□□ -1.28
CNOT3-202ENST00000358389 TENM4Q6N022 2769 aa7.05□□□□□ -1.28
CNOT3-202ENST00000358389 LYSTQ99698 3801 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms