RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 A0A1B0GV90 55 aa9.02□□□□□ -0.97
TPM1-206ENST00000358278 LST1O00453 97 aa9.02□□□□□ -0.97
TPM1-206ENST00000358278 GHRHP01286 108 aa9.02□□□□□ -0.97
TPM1-206ENST00000358278 TNXBP22105 4242 aa9.01□□□□□ -0.97
TPM1-206ENST00000358278 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
TPM1-206ENST00000358278 OCIAD2Q56VL3 154 aa9.01□□□□□ -0.97
TPM1-206ENST00000358278 Q8N377 158 aa9.01□□□□□ -0.97
TPM1-206ENST00000358278 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
TPM1-206ENST00000358278 LAMTOR3Q9UHA4 124 aa9.01□□□□□ -0.97
TPM1-206ENST00000358278 TRACP01848 142 aa9□□□□□ -0.97
TPM1-206ENST00000358278 C3orf22Q8N5N4 141 aa9□□□□□ -0.97
TPM1-206ENST00000358278 A0A1W2PPM0 123 aa9□□□□□ -0.97
TPM1-206ENST00000358278 TCL1BO95988 128 aa9□□□□□ -0.97
TPM1-206ENST00000358278 ATXN8Q156A1 80 aa9□□□□□ -0.97
TPM1-206ENST00000358278 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
TPM1-206ENST00000358278 FABP2P12104 132 aa8.99□□□□□ -0.97
TPM1-206ENST00000358278 C9orf153Q5TBE3 101 aa8.99□□□□□ -0.97
TPM1-206ENST00000358278 PPDPFLQ8WWR9 84 aa8.99□□□□□ -0.97
TPM1-206ENST00000358278 KRTAP10-8P60410 259 aa8.98□□□□□ -0.97
TPM1-206ENST00000358278 MOBPQ13875 183 aa8.98□□□□□ -0.97
TPM1-206ENST00000358278 ORMDL1Q9P0S3 153 aa8.98□□□□□ -0.97
TPM1-206ENST00000358278 TRBV20-1A0A075B6N2 111 aa8.97□□□□□ -0.97
TPM1-206ENST00000358278 F8WEM9 126 aa8.96□□□□□ -0.98
TPM1-206ENST00000358278 SMIM29Q86T20 159 aa8.96□□□□□ -0.98
TPM1-206ENST00000358278 Q8NBF4 154 aa8.95□□□□□ -0.98
TPM1-206ENST00000358278 H3BQ85 93 aa8.94□□□□□ -0.98
TPM1-206ENST00000358278 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
TPM1-206ENST00000358278 SPCS1Q9Y6A9 102 aa8.92□□□□□ -0.98
TPM1-206ENST00000358278 SSBP3-AS1Q7Z2R9 100 aa8.91□□□□□ -0.98
TPM1-206ENST00000358278 LINC00304Q8N9R0 145 aa8.91□□□□□ -0.98
TPM1-206ENST00000358278 NDUFV3P56181 108 aaKnown RBP8.9□□□□□ -0.98
TPM1-206ENST00000358278 C9JAW5 83 aa8.89□□□□□ -0.99
TPM1-206ENST00000358278 H3BMG7 143 aa8.89□□□□□ -0.99
TPM1-206ENST00000358278 BAALC-AS2P0C853 105 aa8.89□□□□□ -0.99
TPM1-206ENST00000358278 LCE2BO14633 110 aa8.88□□□□□ -0.99
TPM1-206ENST00000358278 UBE2V1Q13404 147 aa8.86□□□□□ -0.99
TPM1-206ENST00000358278 MTURNQ8N3F0 131 aa8.86□□□□□ -0.99
TPM1-206ENST00000358278 A0A1B0GV72 72 aa8.85□□□□□ -0.99
TPM1-206ENST00000358278 K7EP34 96 aa8.85□□□□□ -0.99
TPM1-206ENST00000358278 IGLV8-61A0A075B6I0 122 aa8.85□□□□□ -0.99
TPM1-206ENST00000358278 Q6JHZ5 121 aa8.85□□□□□ -0.99
TPM1-206ENST00000358278 SPAG11AQ6PDA7 123 aa8.85□□□□□ -0.99
TPM1-206ENST00000358278 ANKRD29Q8N6D5 301 aa8.84□□□□□ -0.99
TPM1-206ENST00000358278 GTF2H5Q6ZYL4 71 aa8.83□□□□□ -1
TPM1-206ENST00000358278 A0A0G2JQZ4 141 aa8.83□□□□□ -1
TPM1-206ENST00000358278 IGFL1Q6UW32 110 aa8.82□□□□□ -1
TPM1-206ENST00000358278 HRCT1Q6UXD1 115 aa8.82□□□□□ -1
TPM1-206ENST00000358278 SPINK1P00995 79 aa8.81□□□□□ -1
TPM1-206ENST00000358278 HERC1Q15751 4861 aa8.81□□□□□ -1
TPM1-206ENST00000358278 H3BT86 120 aa8.8□□□□□ -1
TPM1-206ENST00000358278 CD164Q04900 197 aa8.79□□□□□ -1
TPM1-206ENST00000358278 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
TPM1-206ENST00000358278 JMJD7-PLA2G4BH0Y9G9 81 aa8.76□□□□□ -1.01
TPM1-206ENST00000358278 RPS29P62273 56 aaKnown RBP8.76□□□□□ -1.01
TPM1-206ENST00000358278 DSCR8Q96T75 97 aa8.76□□□□□ -1.01
TPM1-206ENST00000358278 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
TPM1-206ENST00000358278 TRBV7-4A0A0J9YYF1 115 aa8.73□□□□□ -1.01
TPM1-206ENST00000358278 TEN1Q86WV5 123 aa8.73□□□□□ -1.01
TPM1-206ENST00000358278 PRO0461Q9UI25 63 aa8.73□□□□□ -1.01
TPM1-206ENST00000358278 TRBV7-7A0A0K0K1E9 115 aa8.71□□□□□ -1.01
TPM1-206ENST00000358278 CCKP06307 115 aa8.71□□□□□ -1.01
TPM1-206ENST00000358278 Q6Q795 121 aa8.71□□□□□ -1.02
TPM1-206ENST00000358278 VPS25Q9BRG1 176 aa8.71□□□□□ -1.02
TPM1-206ENST00000358278 C14orf132Q9NPU4 83 aa8.71□□□□□ -1.02
TPM1-206ENST00000358278 RETNLBQ9BQ08 111 aa8.7□□□□□ -1.02
TPM1-206ENST00000358278 A0A1W2PNM2 257 aa8.69□□□□□ -1.02
TPM1-206ENST00000358278 F8W1H4 67 aa8.69□□□□□ -1.02
TPM1-206ENST00000358278 OBSCN-AS1Q96MR7 158 aa8.69□□□□□ -1.02
TPM1-206ENST00000358278 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
TPM1-206ENST00000358278 PDE6GP18545 87 aa8.67□□□□□ -1.02
TPM1-206ENST00000358278 Q5XG85 94 aa8.67□□□□□ -1.02
TPM1-206ENST00000358278 A0A087WSZ3 146 aa8.66□□□□□ -1.02
TPM1-206ENST00000358278 Q6ZQT0 140 aa8.66□□□□□ -1.02
TPM1-206ENST00000358278 PRR4Q16378 134 aa8.66□□□□□ -1.02
TPM1-206ENST00000358278 SS18L2Q9UHA2 77 aa8.66□□□□□ -1.02
TPM1-206ENST00000358278 C21orf62-AS1Q17RA5 79 aa8.62□□□□□ -1.03
TPM1-206ENST00000358278 ETDBQ3ZM63 59 aa8.61□□□□□ -1.03
TPM1-206ENST00000358278 ASB16-AS1Q495Z4 193 aa8.6□□□□□ -1.03
TPM1-206ENST00000358278 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
TPM1-206ENST00000358278 C1orf195Q5TG92 126 aa8.59□□□□□ -1.03
TPM1-206ENST00000358278 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
TPM1-206ENST00000358278 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
TPM1-206ENST00000358278 A0A1B0GW54 56 aa8.57□□□□□ -1.04
TPM1-206ENST00000358278 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
TPM1-206ENST00000358278 Q96NJ1 140 aa8.51□□□□□ -1.05
TPM1-206ENST00000358278 LPAP08519 4548 aa8.5□□□□□ -1.05
TPM1-206ENST00000358278 SIGMAR1Q99720 223 aa8.49□□□□□ -1.05
TPM1-206ENST00000358278 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
TPM1-206ENST00000358278 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
TPM1-206ENST00000358278 IGKV4-1P06312 121 aa8.48□□□□□ -1.05
TPM1-206ENST00000358278 NREPQ16612 68 aa8.48□□□□□ -1.05
TPM1-206ENST00000358278 DEFB116Q30KQ4 102 aa8.48□□□□□ -1.05
TPM1-206ENST00000358278 LRP2P98164 4655 aa8.48□□□□□ -1.05
TPM1-206ENST00000358278 K7ERU9 68 aa8.47□□□□□ -1.05
TPM1-206ENST00000358278 KRTAP13-3Q3SY46 172 aa8.46□□□□□ -1.06
TPM1-206ENST00000358278 CDIP1Q9H305 208 aa8.44□□□□□ -1.06
TPM1-206ENST00000358278 C9orf92A6NGG3 77 aa8.43□□□□□ -1.06
TPM1-206ENST00000358278 J3KT08 172 aa8.43□□□□□ -1.06
TPM1-206ENST00000358278 UBL5Q9BZL1 73 aa8.42□□□□□ -1.06
TPM1-206ENST00000358278 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms