RNA–Protein interactions for RNA: ENST00000357517.6

PCDH1-202, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 3,307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-202ENST00000357517 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.35
PCDH1-202ENST00000357517 SPRR4Q96PI1 79 aa6.65□□□□□ -1.35
PCDH1-202ENST00000357517 IGLV1-50A0A075B6I6 118 aa6.65□□□□□ -1.35
PCDH1-202ENST00000357517 DHRS4-AS1Q9P1J3 65 aa6.65□□□□□ -1.35
PCDH1-202ENST00000357517 ITPR3Q14573 2671 aa6.64□□□□□ -1.35
PCDH1-202ENST00000357517 IGFL1Q6UW32 110 aa6.64□□□□□ -1.35
PCDH1-202ENST00000357517 C19orf73Q9NVV2 129 aa6.64□□□□□ -1.35
PCDH1-202ENST00000357517 FBN1P35555 2871 aaKnown RBP6.64□□□□□ -1.35
PCDH1-202ENST00000357517 VWFP04275 2813 aa6.64□□□□□ -1.35
PCDH1-202ENST00000357517 FLNBO75369 2602 aaKnown RBP6.64□□□□□ -1.35
PCDH1-202ENST00000357517 LINC01558Q9Y6Z2 57 aa6.64□□□□□ -1.35
PCDH1-202ENST00000357517 C9orf163Q8N9P6 203 aa6.63□□□□□ -1.35
PCDH1-202ENST00000357517 X6R8D5 127 aa6.63□□□□□ -1.35
PCDH1-202ENST00000357517 TEP1Q99973 2627 aaKnown RBP6.62□□□□□ -1.35
PCDH1-202ENST00000357517 TNP2Q05952 138 aa6.62□□□□□ -1.35
PCDH1-202ENST00000357517 HECTD1Q9ULT8 2610 aa6.62□□□□□ -1.35
PCDH1-202ENST00000357517 IGLV7-46A0A075B6I9 117 aa6.61□□□□□ -1.35
PCDH1-202ENST00000357517 PRLHP81277 87 aa6.61□□□□□ -1.35
PCDH1-202ENST00000357517 LELP1Q5T871 98 aa6.61□□□□□ -1.35
PCDH1-202ENST00000357517 CNBPP62633 177 aaKnown RBP6.61□□□□□ -1.35
PCDH1-202ENST00000357517 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
PCDH1-202ENST00000357517 PLA2G1BP04054 148 aaKnown RBP6.6□□□□□ -1.35
PCDH1-202ENST00000357517 ZNF469Q96JG9 3925 aaPredicted RBP6.6□□□□□ -1.35
PCDH1-202ENST00000357517 C15orf56Q8N910 161 aa6.6□□□□□ -1.35
PCDH1-202ENST00000357517 FLNAP21333 2647 aaKnown RBP6.6□□□□□ -1.35
PCDH1-202ENST00000357517 HRES1P13985 223 aa6.6□□□□□ -1.35
PCDH1-202ENST00000357517 PRR34Q9NV39 138 aa6.6□□□□□ -1.35
PCDH1-202ENST00000357517 KRTAP29-1A8MX34 341 aaPredicted RBP6.59□□□□□ -1.35
PCDH1-202ENST00000357517 A0A1B0GW54 56 aa6.57□□□□□ -1.36
PCDH1-202ENST00000357517 CMC4P56277 68 aaPredicted RBP6.57□□□□□ -1.36
PCDH1-202ENST00000357517 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
PCDH1-202ENST00000357517 COL7A1Q02388 2944 aa6.57□□□□□ -1.36
PCDH1-202ENST00000357517 FLG2Q5D862 2391 aaPredicted RBP6.56□□□□□ -1.36
PCDH1-202ENST00000357517 H3BPC8 53 aa6.55□□□□□ -1.36
PCDH1-202ENST00000357517 TRRAPQ9Y4A5 3859 aa6.54□□□□□ -1.36
PCDH1-202ENST00000357517 IGLV8-61A0A075B6I0 122 aa6.54□□□□□ -1.36
PCDH1-202ENST00000357517 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
PCDH1-202ENST00000357517 IGLV5-37A0A075B6J1 123 aa6.53□□□□□ -1.36
PCDH1-202ENST00000357517 A8MWP4 228 aa6.52□□□□□ -1.37
PCDH1-202ENST00000357517 Q6ZR54 194 aa6.52□□□□□ -1.37
PCDH1-202ENST00000357517 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
PCDH1-202ENST00000357517 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
PCDH1-202ENST00000357517 K7EIL1 84 aa6.5□□□□□ -1.37
PCDH1-202ENST00000357517 SPART-AS1P0CW21 52 aa6.5□□□□□ -1.37
PCDH1-202ENST00000357517 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
PCDH1-202ENST00000357517 IGHV6-1A0A0B4J1U7 121 aa6.5□□□□□ -1.37
PCDH1-202ENST00000357517 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
PCDH1-202ENST00000357517 MMP24-AS1A0A0U1RRL7 71 aa6.48□□□□□ -1.37
PCDH1-202ENST00000357517 A0A1B0GU69 56 aa6.48□□□□□ -1.37
PCDH1-202ENST00000357517 NOTCH1P46531 2555 aa6.48□□□□□ -1.37
PCDH1-202ENST00000357517 ATRQ13535 2644 aa6.47□□□□□ -1.37
PCDH1-202ENST00000357517 RTL8CO15255 209 aa6.47□□□□□ -1.37
PCDH1-202ENST00000357517 CASC10Q5T4H9 136 aa6.47□□□□□ -1.37
PCDH1-202ENST00000357517 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
PCDH1-202ENST00000357517 COL6A5A8TX70 2615 aa6.46□□□□□ -1.38
PCDH1-202ENST00000357517 KRTAP26-1Q6PEX3 210 aa6.46□□□□□ -1.38
PCDH1-202ENST00000357517 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
PCDH1-202ENST00000357517 SPRR1AP35321 89 aa6.43□□□□□ -1.38
PCDH1-202ENST00000357517 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
PCDH1-202ENST00000357517 LINC00472Q9H8W2 130 aa6.43□□□□□ -1.38
PCDH1-202ENST00000357517 TENM2Q9NT68 2774 aa6.43□□□□□ -1.38
PCDH1-202ENST00000357517 ITPR2Q14571 2701 aa6.43□□□□□ -1.38
PCDH1-202ENST00000357517 IGLV9-49A0A0B4J1Y8 123 aa6.43□□□□□ -1.38
PCDH1-202ENST00000357517 DEFB113Q30KQ7 82 aa6.43□□□□□ -1.38
PCDH1-202ENST00000357517 NBEAL1Q6ZS30 2694 aa6.42□□□□□ -1.38
PCDH1-202ENST00000357517 ROMO1P60602 79 aa6.41□□□□□ -1.38
PCDH1-202ENST00000357517 CRIPTQ9P021 101 aa6.4□□□□□ -1.39
PCDH1-202ENST00000357517 SPINK6Q6UWN8 80 aa6.39□□□□□ -1.39
PCDH1-202ENST00000357517 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
PCDH1-202ENST00000357517 CDK2AP2O75956 126 aa6.39□□□□□ -1.39
PCDH1-202ENST00000357517 ASB16-AS1Q495Z4 193 aa6.38□□□□□ -1.39
PCDH1-202ENST00000357517 TENM1Q9UKZ4 2725 aa6.38□□□□□ -1.39
PCDH1-202ENST00000357517 A0A087X002 238 aa6.37□□□□□ -1.39
PCDH1-202ENST00000357517 NOTCH2NLQ7Z3S9 236 aa6.37□□□□□ -1.39
PCDH1-202ENST00000357517 TENM4Q6N022 2769 aa6.37□□□□□ -1.39
PCDH1-202ENST00000357517 INAFM1C9JVW0 142 aa6.37□□□□□ -1.39
PCDH1-202ENST00000357517 TP53AIP1Q9HCN2 124 aa6.37□□□□□ -1.39
PCDH1-202ENST00000357517 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
PCDH1-202ENST00000357517 UQCR11O14957 56 aa6.37□□□□□ -1.39
PCDH1-202ENST00000357517 ACYP2P14621 99 aa6.36□□□□□ -1.39
PCDH1-202ENST00000357517 MAST4O15021 2626 aa6.35□□□□□ -1.39
PCDH1-202ENST00000357517 CHTF8P0CG12 524 aa6.33□□□□□ -1.4
PCDH1-202ENST00000357517 SPATA8Q6RVD6 105 aa6.33□□□□□ -1.4
PCDH1-202ENST00000357517 KRTAP1-3Q8IUG1 177 aa6.33□□□□□ -1.4
PCDH1-202ENST00000357517 DEFB131BA0A096LNP1 70 aa6.33□□□□□ -1.4
PCDH1-202ENST00000357517 SPINK1P00995 79 aa6.33□□□□□ -1.4
PCDH1-202ENST00000357517 Q5W150 140 aa6.33□□□□□ -1.4
PCDH1-202ENST00000357517 MRPL34Q9BQ48 92 aaKnown RBP6.32□□□□□ -1.4
PCDH1-202ENST00000357517 KRTAP11-1Q8IUC1 163 aa6.31□□□□□ -1.4
PCDH1-202ENST00000357517 J3QKU1 62 aa6.31□□□□□ -1.4
PCDH1-202ENST00000357517 NSD1Q96L73 2696 aaPredicted RBP6.3□□□□□ -1.4
PCDH1-202ENST00000357517 KRTAP10-3P60369 221 aa6.3□□□□□ -1.4
PCDH1-202ENST00000357517 PLA2G2DQ9UNK4 145 aa6.3□□□□□ -1.4
PCDH1-202ENST00000357517 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
PCDH1-202ENST00000357517 TLX1NBP0CAT3 122 aa6.28□□□□□ -1.4
PCDH1-202ENST00000357517 LINC01556Q5JQF7 62 aa6.28□□□□□ -1.4
PCDH1-202ENST00000357517 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
PCDH1-202ENST00000357517 A0A1B0GVX0 72 aa6.27□□□□□ -1.41
PCDH1-202ENST00000357517 ZNF861PO60384 105 aa6.27□□□□□ -1.41
PCDH1-202ENST00000357517 SMR3AQ99954 134 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms