RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 PRLHP81277 87 aa2.46□□□□□ -2.02
LIG4-201ENST00000356922 Q8N1X5 172 aa2.46□□□□□ -2.02
LIG4-201ENST00000356922 IMUPQ9GZP8 106 aa2.46□□□□□ -2.02
LIG4-201ENST00000356922 KRTAP4-16G5E9R7 235 aaPredicted RBP2.46□□□□□ -2.02
LIG4-201ENST00000356922 ZNF73O43830 326 aaPredicted RBP2.46□□□□□ -2.02
LIG4-201ENST00000356922 DNAL4O96015 105 aa2.46□□□□□ -2.02
LIG4-201ENST00000356922 IGLV6-57P01721 117 aa2.46□□□□□ -2.02
LIG4-201ENST00000356922 C6orf99Q4VX62 202 aa2.46□□□□□ -2.02
LIG4-201ENST00000356922 PRO1854Q9UHT4 67 aa2.46□□□□□ -2.02
LIG4-201ENST00000356922 NDUFC2O95298 119 aa2.45□□□□□ -2.02
LIG4-201ENST00000356922 TCL1BO95988 128 aa2.45□□□□□ -2.02
LIG4-201ENST00000356922 COX7CP15954 63 aa2.45□□□□□ -2.02
LIG4-201ENST00000356922 COX7BP24311 80 aa2.45□□□□□ -2.02
LIG4-201ENST00000356922 TRBV10-2A0A0K0K1G8 114 aa2.45□□□□□ -2.02
LIG4-201ENST00000356922 FAM236DA0A1B0GTK5 79 aa2.45□□□□□ -2.02
LIG4-201ENST00000356922 FAM236CP0DP71 79 aa2.45□□□□□ -2.02
LIG4-201ENST00000356922 TRBV7-7A0A0K0K1E9 115 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 hADV29S1A0JD25 119 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 ERC2-IT1O76042 136 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 ATXN8Q156A1 80 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 KRTAP13-1Q8IUC0 172 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 KCNQ1DNQ9H478 68 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 ANAPC11Q9NYG5 84 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 ATOX1O00244 68 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 CRYGAP11844 174 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 LCE2AQ5TA79 106 aaPredicted RBP2.44□□□□□ -2.02
LIG4-201ENST00000356922 DMBT1Q9UGM3 2413 aaPredicted RBP2.44□□□□□ -2.02
LIG4-201ENST00000356922 PRYO14603 147 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 BCE1O60756 84 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 INAFM2P0DMQ5 153 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 SPRR1AP35321 89 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 SMIM11BQ8TCY0 68 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 DSCR8Q96T75 97 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 Q9BRP9 147 aa2.44□□□□□ -2.02
LIG4-201ENST00000356922 TEX49A0A1B0GTD5 131 aa2.43□□□□□ -2.02
LIG4-201ENST00000356922 F8WEM9 126 aa2.43□□□□□ -2.02
LIG4-201ENST00000356922 IGLV7-43P04211 117 aa2.43□□□□□ -2.02
LIG4-201ENST00000356922 ACYP1P07311 99 aa2.43□□□□□ -2.02
LIG4-201ENST00000356922 FAM240AA0A1B0GVK7 77 aa2.43□□□□□ -2.02
LIG4-201ENST00000356922 A0A0U1RQV1 116 aa2.43□□□□□ -2.02
LIG4-201ENST00000356922 LORP23490 312 aaPredicted RBP2.43□□□□□ -2.02
LIG4-201ENST00000356922 ZNF706Q9Y5V0 76 aaPredicted RBP2.43□□□□□ -2.02
LIG4-201ENST00000356922 ZNF861PO60384 105 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 SMCR5Q8TEV8 140 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 IGLV9-49A0A0B4J1Y8 123 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 LINC00643Q86TS7 51 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 DHRS4-AS1Q9P1J3 65 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 A0A0B4J2C4 111 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 KRTAP1-4P0C5Y4 121 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 ST20-AS1Q8NBB2 130 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 LAMTOR3Q9UHA4 124 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 LPAP08519 4548 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 H0YGX0 51 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 Q5XG85 94 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 FAM218AQ96MZ4 157 aa2.42□□□□□ -2.02
LIG4-201ENST00000356922 LOC100996750A0A140TA64 210 aa2.41□□□□□ -2.02
LIG4-201ENST00000356922 H3BT86 120 aa2.41□□□□□ -2.02
LIG4-201ENST00000356922 SPINK6Q6UWN8 80 aa2.41□□□□□ -2.02
LIG4-201ENST00000356922 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
LIG4-201ENST00000356922 A0A087X002 238 aa2.41□□□□□ -2.02
LIG4-201ENST00000356922 Q6ZRX8 168 aa2.41□□□□□ -2.02
LIG4-201ENST00000356922 CLEC2BQ92478 149 aa2.41□□□□□ -2.02
LIG4-201ENST00000356922 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.02
LIG4-201ENST00000356922 TRIAP1O43715 76 aa2.4□□□□□ -2.02
LIG4-201ENST00000356922 Q6ZQY7 126 aa2.4□□□□□ -2.02
LIG4-201ENST00000356922 SERP2Q8N6R1 65 aa2.4□□□□□ -2.02
LIG4-201ENST00000356922 ELOF1P60002 83 aaKnown RBP2.4□□□□□ -2.03
LIG4-201ENST00000356922 LRP2P98164 4655 aa2.4□□□□□ -2.03
LIG4-201ENST00000356922 H0Y9J4 135 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 MT1HL1P0DM35 61 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 LINC01547P58512 204 aaPredicted RBP2.39□□□□□ -2.03
LIG4-201ENST00000356922 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 TYMSOSQ8TAI1 123 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 SMIM26A0A096LP01 95 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 PMAIP1Q13794 54 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 SERP1Q9Y6X1 66 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 A0A0G2JQZ4 141 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 KRTAP13-2Q52LG2 175 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 PRR26Q8N8Z3 221 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 ORMDL1Q9P0S3 153 aa2.39□□□□□ -2.03
LIG4-201ENST00000356922 MUC2Q02817 5179 aa2.38□□□□□ -2.03
LIG4-201ENST00000356922 LINC00575Q6W349 94 aa2.38□□□□□ -2.03
LIG4-201ENST00000356922 OXTP01178 125 aa2.38□□□□□ -2.03
LIG4-201ENST00000356922 MOBPQ13875 183 aa2.38□□□□□ -2.03
LIG4-201ENST00000356922 SPRR4Q96PI1 79 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 RNF213Q63HN8 5207 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 TRBV7-6A0A0J9YX20 115 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 BAALC-AS2P0C853 105 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 KRTAP10-8P60410 259 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.37□□□□□ -2.03
LIG4-201ENST00000356922 SMIM29Q86T20 159 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 Q8N377 158 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 CD164Q04900 197 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 TMEM256-PLSCR3K7ERE1 68 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 RBM3P98179 157 aaKnown RBP2.37□□□□□ -2.03
LIG4-201ENST00000356922 LINC01600Q96MT4 127 aa2.37□□□□□ -2.03
LIG4-201ENST00000356922 HIST1H4AP62805 103 aaKnown RBP2.36□□□□□ -2.03
LIG4-201ENST00000356922 C20orf197Q8N268 126 aa2.36□□□□□ -2.03
LIG4-201ENST00000356922 LINC00483Q53H64 154 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms