RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF292O60281 2723 aa3.41□□□□□ -1.86
PTPRD-202ENST00000356435 PLAC4Q8WY50 150 aa3.4□□□□□ -1.86
PTPRD-202ENST00000356435 A0A0A0MQY5 61 aa3.4□□□□□ -1.86
PTPRD-202ENST00000356435 Q75L30 129 aa3.4□□□□□ -1.87
PTPRD-202ENST00000356435 HELZ2Q9BYK8 2649 aaKnown RBP3.4□□□□□ -1.87
PTPRD-202ENST00000356435 KMT2BQ9UMN6 2715 aaPredicted RBP3.4□□□□□ -1.87
PTPRD-202ENST00000356435 MMP24-AS1A0A0U1RRL7 71 aa3.39□□□□□ -1.87
PTPRD-202ENST00000356435 GOLGB1Q14789 3259 aaKnown RBP3.39□□□□□ -1.87
PTPRD-202ENST00000356435 Q5W150 140 aa3.38□□□□□ -1.87
PTPRD-202ENST00000356435 SPINK7P58062 85 aa3.38□□□□□ -1.87
PTPRD-202ENST00000356435 FLG2Q5D862 2391 aaPredicted RBP3.38□□□□□ -1.87
PTPRD-202ENST00000356435 M0QZ58 72 aa3.38□□□□□ -1.87
PTPRD-202ENST00000356435 Q8NDZ9 215 aa3.37□□□□□ -1.87
PTPRD-202ENST00000356435 SPRR1AP35321 89 aa3.37□□□□□ -1.87
PTPRD-202ENST00000356435 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
PTPRD-202ENST00000356435 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
PTPRD-202ENST00000356435 SPRR1BP22528 89 aa3.35□□□□□ -1.87
PTPRD-202ENST00000356435 Q5VV11 94 aa3.34□□□□□ -1.87
PTPRD-202ENST00000356435 SETXQ7Z333 2677 aaKnown RBP3.34□□□□□ -1.88
PTPRD-202ENST00000356435 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
PTPRD-202ENST00000356435 ROMO1P60602 79 aa3.32□□□□□ -1.88
PTPRD-202ENST00000356435 RPL37P61927 97 aaKnown RBP3.32□□□□□ -1.88
PTPRD-202ENST00000356435 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
PTPRD-202ENST00000356435 LINC00472Q9H8W2 130 aa3.31□□□□□ -1.88
PTPRD-202ENST00000356435 PCNTO95613 3336 aa3.31□□□□□ -1.88
PTPRD-202ENST00000356435 FLNAP21333 2647 aaKnown RBP3.31□□□□□ -1.88
PTPRD-202ENST00000356435 KRTAP4-16G5E9R7 235 aaPredicted RBP3.31□□□□□ -1.88
PTPRD-202ENST00000356435 KRTAP29-1A8MX34 341 aaPredicted RBP3.31□□□□□ -1.88
PTPRD-202ENST00000356435 KRTAP10-2P60368 255 aa3.31□□□□□ -1.88
PTPRD-202ENST00000356435 ADM2Q7Z4H4 148 aa3.3□□□□□ -1.88
PTPRD-202ENST00000356435 KRTAP1-5Q9BYS1 174 aa3.3□□□□□ -1.88
PTPRD-202ENST00000356435 KRTAP26-1Q6PEX3 210 aa3.29□□□□□ -1.88
PTPRD-202ENST00000356435 NBEAQ8NFP9 2946 aa3.29□□□□□ -1.88
PTPRD-202ENST00000356435 A6NN06 94 aa3.29□□□□□ -1.88
PTPRD-202ENST00000356435 ITPR3Q14573 2671 aa3.27□□□□□ -1.89
PTPRD-202ENST00000356435 PANO1I0J062 215 aa3.26□□□□□ -1.89
PTPRD-202ENST00000356435 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
PTPRD-202ENST00000356435 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
PTPRD-202ENST00000356435 Q6ZR54 194 aa3.25□□□□□ -1.89
PTPRD-202ENST00000356435 KRTAP21-3Q3LHN1 58 aa3.25□□□□□ -1.89
PTPRD-202ENST00000356435 RANBP2P49792 3224 aaKnown RBP3.25□□□□□ -1.89
PTPRD-202ENST00000356435 NOTCH1P46531 2555 aa3.24□□□□□ -1.89
PTPRD-202ENST00000356435 TEP1Q99973 2627 aaKnown RBP3.24□□□□□ -1.89
PTPRD-202ENST00000356435 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
PTPRD-202ENST00000356435 DSPP15924 2871 aaKnown RBP3.23□□□□□ -1.89
PTPRD-202ENST00000356435 GCN1Q92616 2671 aaKnown RBP3.23□□□□□ -1.89
PTPRD-202ENST00000356435 CFAP46Q8IYW2 2715 aa3.22□□□□□ -1.89
PTPRD-202ENST00000356435 NBEAL1Q6ZS30 2694 aa3.22□□□□□ -1.89
PTPRD-202ENST00000356435 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
PTPRD-202ENST00000356435 COL6A5A8TX70 2615 aa3.2□□□□□ -1.9
PTPRD-202ENST00000356435 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
PTPRD-202ENST00000356435 AKAP13Q12802 2813 aa3.19□□□□□ -1.9
PTPRD-202ENST00000356435 A8MUU9 505 aa3.19□□□□□ -1.9
PTPRD-202ENST00000356435 STAB2Q8WWQ8 2551 aa3.19□□□□□ -1.9
PTPRD-202ENST00000356435 CENPEQ02224 2701 aa3.19□□□□□ -1.9
PTPRD-202ENST00000356435 FLNCQ14315 2725 aa3.18□□□□□ -1.9
PTPRD-202ENST00000356435 C20orf166-AS1Q96NR2 134 aa3.18□□□□□ -1.9
PTPRD-202ENST00000356435 UNC79Q9P2D8 2635 aa3.18□□□□□ -1.9
PTPRD-202ENST00000356435 CHD6Q8TD26 2715 aa3.18□□□□□ -1.9
PTPRD-202ENST00000356435 MAP1AP78559 2803 aaPredicted RBP3.17□□□□□ -1.9
PTPRD-202ENST00000356435 BAHCC1Q9P281 2608 aa3.17□□□□□ -1.9
PTPRD-202ENST00000356435 C5orf42Q9H799 3197 aa3.17□□□□□ -1.9
PTPRD-202ENST00000356435 HRNRQ86YZ3 2850 aaPredicted RBP3.15□□□□□ -1.9
PTPRD-202ENST00000356435 UTP20O75691 2785 aaKnown RBP3.14□□□□□ -1.91
PTPRD-202ENST00000356435 UTRNP46939 3433 aa3.14□□□□□ -1.91
PTPRD-202ENST00000356435 KRTAP7-1Q8IUC3 87 aa3.14□□□□□ -1.91
PTPRD-202ENST00000356435 TRIOO75962 3097 aa3.13□□□□□ -1.91
PTPRD-202ENST00000356435 IGSF10Q6WRI0 2623 aa3.13□□□□□ -1.91
PTPRD-202ENST00000356435 Q6ZRN7 208 aaPredicted RBP3.12□□□□□ -1.91
PTPRD-202ENST00000356435 MGAQ8IWI9 3026 aa3.12□□□□□ -1.91
PTPRD-202ENST00000356435 TNP1P09430 55 aa3.12□□□□□ -1.91
PTPRD-202ENST00000356435 A8MU10 97 aa3.12□□□□□ -1.91
PTPRD-202ENST00000356435 TEX15Q9BXT5 2789 aa3.12□□□□□ -1.91
PTPRD-202ENST00000356435 NIPBLQ6KC79 2804 aaeCLIP3.11□□□□□ -1.91
PTPRD-202ENST00000356435 KRTAP13-1Q8IUC0 172 aa3.1□□□□□ -1.91
PTPRD-202ENST00000356435 FRYQ5TBA9 3013 aa3.1□□□□□ -1.91
PTPRD-202ENST00000356435 ITPR1Q14643 2758 aa3.1□□□□□ -1.91
PTPRD-202ENST00000356435 KRTAP13-2Q52LG2 175 aa3.09□□□□□ -1.91
PTPRD-202ENST00000356435 CFAP54Q96N23 3096 aa3.09□□□□□ -1.91
PTPRD-202ENST00000356435 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.92
PTPRD-202ENST00000356435 LAMA2P24043 3122 aaKnown RBP3.09□□□□□ -1.92
PTPRD-202ENST00000356435 NBEAL2Q6ZNJ1 2754 aa3.08□□□□□ -1.92
PTPRD-202ENST00000356435 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
PTPRD-202ENST00000356435 LAMA3Q16787 3333 aa3.07□□□□□ -1.92
PTPRD-202ENST00000356435 NSD1Q96L73 2696 aaPredicted RBP3.07□□□□□ -1.92
PTPRD-202ENST00000356435 UNC80Q8N2C7 3258 aa3.07□□□□□ -1.92
PTPRD-202ENST00000356435 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
PTPRD-202ENST00000356435 TNRC18O15417 2968 aaPredicted RBP3.06□□□□□ -1.92
PTPRD-202ENST00000356435 MKI67P46013 3256 aaKnown RBP3.06□□□□□ -1.92
PTPRD-202ENST00000356435 TACC2O95359 2948 aa3.06□□□□□ -1.92
PTPRD-202ENST00000356435 UBR5O95071 2799 aaPredicted RBP3.05□□□□□ -1.92
PTPRD-202ENST00000356435 BRCA2P51587 3418 aa3.05□□□□□ -1.92
PTPRD-202ENST00000356435 KRTAP11-1Q8IUC1 163 aa3.05□□□□□ -1.92
PTPRD-202ENST00000356435 VPS13AQ96RL7 3174 aa3.04□□□□□ -1.92
PTPRD-202ENST00000356435 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
PTPRD-202ENST00000356435 ZZEF1O43149 2961 aa3.04□□□□□ -1.92
PTPRD-202ENST00000356435 KRTAP13-3Q3SY46 172 aa3.04□□□□□ -1.92
PTPRD-202ENST00000356435 ZANQ9Y493 2812 aa3.03□□□□□ -1.92
PTPRD-202ENST00000356435 ADGRG4Q8IZF6 3080 aa3.03□□□□□ -1.92
PTPRD-202ENST00000356435 PRO2289Q9P1D8 64 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms