RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 IGFL1Q6UW32 110 aa8.51□□□□□ -1.05
NCDN-201ENST00000356090 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
NCDN-201ENST00000356090 STAB2Q8WWQ8 2551 aa8.51□□□□□ -1.05
NCDN-201ENST00000356090 CHTF8P0CG12 524 aa8.5□□□□□ -1.05
NCDN-201ENST00000356090 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
NCDN-201ENST00000356090 KRTAP4-16G5E9R7 235 aaPredicted RBP8.5□□□□□ -1.05
NCDN-201ENST00000356090 H0Y9J4 135 aa8.49□□□□□ -1.05
NCDN-201ENST00000356090 TLX1NBP0CAT3 122 aa8.49□□□□□ -1.05
NCDN-201ENST00000356090 TNP2Q05952 138 aa8.49□□□□□ -1.05
NCDN-201ENST00000356090 KRTAP24-1Q3LI83 254 aa8.48□□□□□ -1.05
NCDN-201ENST00000356090 SPRR1AP35321 89 aa8.47□□□□□ -1.05
NCDN-201ENST00000356090 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
NCDN-201ENST00000356090 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.05
NCDN-201ENST00000356090 PLA2G2DQ9UNK4 145 aa8.46□□□□□ -1.06
NCDN-201ENST00000356090 hDV103S1A0JD37 113 aa8.45□□□□□ -1.06
NCDN-201ENST00000356090 A0A1B0GW54 56 aa8.44□□□□□ -1.06
NCDN-201ENST00000356090 CASC2Q6XLA1 102 aa8.44□□□□□ -1.06
NCDN-201ENST00000356090 IGLV5-37A0A075B6J1 123 aa8.42□□□□□ -1.06
NCDN-201ENST00000356090 H0Y9P7 68 aa8.42□□□□□ -1.06
NCDN-201ENST00000356090 TENM2Q9NT68 2774 aa8.42□□□□□ -1.06
NCDN-201ENST00000356090 CSMD3Q7Z407 3707 aa8.4□□□□□ -1.06
NCDN-201ENST00000356090 IGLV9-49A0A0B4J1Y8 123 aa8.4□□□□□ -1.07
NCDN-201ENST00000356090 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
NCDN-201ENST00000356090 A8MUN3 132 aa8.39□□□□□ -1.07
NCDN-201ENST00000356090 NDUFS5O43920 106 aa8.39□□□□□ -1.07
NCDN-201ENST00000356090 NDUFB1O75438 58 aa8.39□□□□□ -1.07
NCDN-201ENST00000356090 C16orf90A8MZG2 172 aa8.38□□□□□ -1.07
NCDN-201ENST00000356090 PCOTHQ58A44 107 aa8.38□□□□□ -1.07
NCDN-201ENST00000356090 B9D2Q9BPU9 175 aa8.38□□□□□ -1.07
NCDN-201ENST00000356090 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
NCDN-201ENST00000356090 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
NCDN-201ENST00000356090 H3BS24 57 aa8.37□□□□□ -1.07
NCDN-201ENST00000356090 RBM12B-AS1Q9P1G2 102 aa8.36□□□□□ -1.07
NCDN-201ENST00000356090 PRR15Q8IV56 129 aa8.35□□□□□ -1.07
NCDN-201ENST00000356090 ZCCHC13Q8WW36 166 aaKnown RBP8.35□□□□□ -1.07
NCDN-201ENST00000356090 KRTAP11-1Q8IUC1 163 aa8.35□□□□□ -1.07
NCDN-201ENST00000356090 CHKB-CPT1BH3BT56 60 aa8.33□□□□□ -1.08
NCDN-201ENST00000356090 K7EIL1 84 aa8.32□□□□□ -1.08
NCDN-201ENST00000356090 COL7A1Q02388 2944 aa8.31□□□□□ -1.08
NCDN-201ENST00000356090 LCE6AA0A183 80 aa8.31□□□□□ -1.08
NCDN-201ENST00000356090 PRR15LQ9BU68 103 aa8.31□□□□□ -1.08
NCDN-201ENST00000356090 CNBPP62633 177 aaKnown RBP8.3□□□□□ -1.08
NCDN-201ENST00000356090 A8MWP4 228 aa8.29□□□□□ -1.08
NCDN-201ENST00000356090 Q1T7F1 81 aa8.28□□□□□ -1.08
NCDN-201ENST00000356090 CDK2AP2O75956 126 aa8.28□□□□□ -1.08
NCDN-201ENST00000356090 ANK2Q01484 3957 aa8.28□□□□□ -1.08
NCDN-201ENST00000356090 IGHV6-1A0A0B4J1U7 121 aa8.28□□□□□ -1.08
NCDN-201ENST00000356090 A8MU10 97 aa8.26□□□□□ -1.09
NCDN-201ENST00000356090 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
NCDN-201ENST00000356090 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
NCDN-201ENST00000356090 SPINK6Q6UWN8 80 aa8.25□□□□□ -1.09
NCDN-201ENST00000356090 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
NCDN-201ENST00000356090 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
NCDN-201ENST00000356090 A6NED7 52 aa8.23□□□□□ -1.09
NCDN-201ENST00000356090 PANO1I0J062 215 aa8.23□□□□□ -1.09
NCDN-201ENST00000356090 KTN1-AS1Q86SY8 53 aa8.22□□□□□ -1.09
NCDN-201ENST00000356090 LINC00472Q9H8W2 130 aa8.22□□□□□ -1.09
NCDN-201ENST00000356090 IGLV8-61A0A075B6I0 122 aa8.22□□□□□ -1.09
NCDN-201ENST00000356090 COA5Q86WW8 74 aa8.2□□□□□ -1.1
NCDN-201ENST00000356090 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
NCDN-201ENST00000356090 MOBPQ13875 183 aa8.19□□□□□ -1.1
NCDN-201ENST00000356090 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
NCDN-201ENST00000356090 MMP24-AS1A0A0U1RRL7 71 aa8.18□□□□□ -1.1
NCDN-201ENST00000356090 Q5VV11 94 aa8.17□□□□□ -1.1
NCDN-201ENST00000356090 Q8N9P0 234 aaPredicted RBP8.17□□□□□ -1.1
NCDN-201ENST00000356090 H3BPC8 53 aa8.16□□□□□ -1.1
NCDN-201ENST00000356090 LIMD2Q9BT23 127 aa8.16□□□□□ -1.1
NCDN-201ENST00000356090 CMYA5Q8N3K9 4069 aa8.16□□□□□ -1.1
NCDN-201ENST00000356090 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
NCDN-201ENST00000356090 MDFIQ99750 246 aa8.15□□□□□ -1.1
NCDN-201ENST00000356090 SPANXA2-OT1Q8N9U9 137 aa8.15□□□□□ -1.11
NCDN-201ENST00000356090 APLNQ9ULZ1 77 aa8.14□□□□□ -1.11
NCDN-201ENST00000356090 NBDYA0A0U1RRE5 68 aa8.13□□□□□ -1.11
NCDN-201ENST00000356090 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
NCDN-201ENST00000356090 SPRR1BP22528 89 aa8.13□□□□□ -1.11
NCDN-201ENST00000356090 C8orf87E5RJ46 101 aa8.12□□□□□ -1.11
NCDN-201ENST00000356090 DNAH10Q8IVF4 4471 aa8.12□□□□□ -1.11
NCDN-201ENST00000356090 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
NCDN-201ENST00000356090 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
NCDN-201ENST00000356090 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
NCDN-201ENST00000356090 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
NCDN-201ENST00000356090 A0A087X002 238 aa8.07□□□□□ -1.12
NCDN-201ENST00000356090 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
NCDN-201ENST00000356090 LYSTQ99698 3801 aa8.07□□□□□ -1.12
NCDN-201ENST00000356090 A0A1B0GVX0 72 aa8.07□□□□□ -1.12
NCDN-201ENST00000356090 PSORS1C2Q9UIG4 136 aa8.07□□□□□ -1.12
NCDN-201ENST00000356090 MRPL34Q9BQ48 92 aaKnown RBP8.06□□□□□ -1.12
NCDN-201ENST00000356090 DNAH1Q9P2D7 4330 aa8.05□□□□□ -1.12
NCDN-201ENST00000356090 DNAH3Q8TD57 4116 aa8.04□□□□□ -1.12
NCDN-201ENST00000356090 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
NCDN-201ENST00000356090 TGP01266 2768 aa8.03□□□□□ -1.12
NCDN-201ENST00000356090 Q96NJ1 140 aa8.03□□□□□ -1.12
NCDN-201ENST00000356090 RTL8CO15255 209 aa8.02□□□□□ -1.13
NCDN-201ENST00000356090 PRR26Q8N8Z3 221 aa8.02□□□□□ -1.13
NCDN-201ENST00000356090 LOC101927531A0A1B0GV80 90 aa8.02□□□□□ -1.13
NCDN-201ENST00000356090 LCA10Q71F78 164 aa8.01□□□□□ -1.13
NCDN-201ENST00000356090 SPACA4Q8TDM5 124 aa8.01□□□□□ -1.13
NCDN-201ENST00000356090 A0A087WTM6 91 aa8□□□□□ -1.13
NCDN-201ENST00000356090 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
NCDN-201ENST00000356090 HUWE1Q7Z6Z7 4374 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms