RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 C16orf90A8MZG2 172 aa11.97□□□□□ -0.49
PRPF39-201ENST00000355765 PLA2G2DQ9UNK4 145 aa11.96□□□□□ -0.49
PRPF39-201ENST00000355765 TENM3Q9P273 2699 aa11.96□□□□□ -0.5
PRPF39-201ENST00000355765 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.5
PRPF39-201ENST00000355765 UBE2AP49459 152 aa11.95□□□□□ -0.5
PRPF39-201ENST00000355765 TLX1NBP0CAT3 122 aa11.94□□□□□ -0.5
PRPF39-201ENST00000355765 PRLHP81277 87 aa11.93□□□□□ -0.5
PRPF39-201ENST00000355765 IGLV5-37A0A075B6J1 123 aa11.93□□□□□ -0.5
PRPF39-201ENST00000355765 KRTAP29-1A8MX34 341 aaPredicted RBP11.93□□□□□ -0.5
PRPF39-201ENST00000355765 CD164Q04900 197 aa11.93□□□□□ -0.5
PRPF39-201ENST00000355765 REG3GQ6UW15 175 aa11.93□□□□□ -0.5
PRPF39-201ENST00000355765 CASC2Q6XLA1 102 aa11.93□□□□□ -0.5
PRPF39-201ENST00000355765 H3BNG1 76 aa11.91□□□□□ -0.5
PRPF39-201ENST00000355765 LIMD2Q9BT23 127 aa11.91□□□□□ -0.5
PRPF39-201ENST00000355765 SRRM2Q9UQ35 2752 aaKnown RBP11.9□□□□□ -0.5
PRPF39-201ENST00000355765 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
PRPF39-201ENST00000355765 SPANXA2-OT1Q8N9U9 137 aa11.89□□□□□ -0.51
PRPF39-201ENST00000355765 LCA10Q71F78 164 aa11.88□□□□□ -0.51
PRPF39-201ENST00000355765 CNBPP62633 177 aaKnown RBP11.88□□□□□ -0.51
PRPF39-201ENST00000355765 A6NED7 52 aa11.87□□□□□ -0.51
PRPF39-201ENST00000355765 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
PRPF39-201ENST00000355765 FBN1P35555 2871 aaKnown RBP11.85□□□□□ -0.51
PRPF39-201ENST00000355765 DEFB131BA0A096LNP1 70 aa11.85□□□□□ -0.51
PRPF39-201ENST00000355765 KTN1-AS1Q86SY8 53 aa11.85□□□□□ -0.51
PRPF39-201ENST00000355765 COA5Q86WW8 74 aa11.85□□□□□ -0.51
PRPF39-201ENST00000355765 MAST4O15021 2626 aa11.83□□□□□ -0.51
PRPF39-201ENST00000355765 C9orf163Q8N9P6 203 aa11.83□□□□□ -0.52
PRPF39-201ENST00000355765 IGKV2-24A0A0C4DH68 120 aa11.81□□□□□ -0.52
PRPF39-201ENST00000355765 PCOTHQ58A44 107 aa11.81□□□□□ -0.52
PRPF39-201ENST00000355765 RBM12B-AS1Q9P1G2 102 aa11.81□□□□□ -0.52
PRPF39-201ENST00000355765 H3BPC8 53 aa11.8□□□□□ -0.52
PRPF39-201ENST00000355765 DNAH10OSP0CZ25 163 aa11.8□□□□□ -0.52
PRPF39-201ENST00000355765 A0A096LNI7 61 aa11.79□□□□□ -0.52
PRPF39-201ENST00000355765 Q75L30 129 aa11.79□□□□□ -0.52
PRPF39-201ENST00000355765 ANK2Q01484 3957 aa11.78□□□□□ -0.52
PRPF39-201ENST00000355765 H0Y9J4 135 aa11.77□□□□□ -0.52
PRPF39-201ENST00000355765 OXLD1Q5BKU9 147 aa11.77□□□□□ -0.52
PRPF39-201ENST00000355765 A8MWP4 228 aa11.77□□□□□ -0.53
PRPF39-201ENST00000355765 IGLV8-61A0A075B6I0 122 aa11.76□□□□□ -0.53
PRPF39-201ENST00000355765 ATP11AUNQ6ZP68 121 aa11.76□□□□□ -0.53
PRPF39-201ENST00000355765 COL6A5A8TX70 2615 aa11.75□□□□□ -0.53
PRPF39-201ENST00000355765 KRTAP24-1Q3LI83 254 aa11.75□□□□□ -0.53
PRPF39-201ENST00000355765 SPAG11AQ6PDA7 123 aa11.74□□□□□ -0.53
PRPF39-201ENST00000355765 C11orf45Q8TAV5 145 aa11.74□□□□□ -0.53
PRPF39-201ENST00000355765 LOC101927531A0A1B0GV80 90 aa11.73□□□□□ -0.53
PRPF39-201ENST00000355765 LINC00472Q9H8W2 130 aa11.73□□□□□ -0.53
PRPF39-201ENST00000355765 A6NN06 94 aa11.72□□□□□ -0.53
PRPF39-201ENST00000355765 CSMD3Q7Z407 3707 aa11.72□□□□□ -0.53
PRPF39-201ENST00000355765 IGLV7-46A0A075B6I9 117 aa11.71□□□□□ -0.53
PRPF39-201ENST00000355765 KRTAP10-11P60412 298 aa11.7□□□□□ -0.54
PRPF39-201ENST00000355765 MMP24-AS1A0A0U1RRL7 71 aa11.69□□□□□ -0.54
PRPF39-201ENST00000355765 DNAH1Q9P2D7 4330 aa11.68□□□□□ -0.54
PRPF39-201ENST00000355765 KRTAP11-1Q8IUC1 163 aa11.68□□□□□ -0.54
PRPF39-201ENST00000355765 CDC42SE1Q9NRR8 79 aa11.68□□□□□ -0.54
PRPF39-201ENST00000355765 NOTCH1P46531 2555 aa11.66□□□□□ -0.54
PRPF39-201ENST00000355765 DNAH10Q8IVF4 4471 aa11.65□□□□□ -0.54
PRPF39-201ENST00000355765 TENM2Q9NT68 2774 aa11.65□□□□□ -0.54
PRPF39-201ENST00000355765 NDUFS5O43920 106 aa11.64□□□□□ -0.55
PRPF39-201ENST00000355765 MOBPQ13875 183 aa11.64□□□□□ -0.55
PRPF39-201ENST00000355765 PHF5AQ7RTV0 110 aaKnown RBP11.63□□□□□ -0.55
PRPF39-201ENST00000355765 SPINK7P58062 85 aa11.62□□□□□ -0.55
PRPF39-201ENST00000355765 CHTF8P0CG12 524 aa11.61□□□□□ -0.55
PRPF39-201ENST00000355765 LINC01558Q9Y6Z2 57 aa11.61□□□□□ -0.55
PRPF39-201ENST00000355765 C7orf65Q6ZTY9 151 aa11.57□□□□□ -0.56
PRPF39-201ENST00000355765 COL7A1Q02388 2944 aa11.56□□□□□ -0.56
PRPF39-201ENST00000355765 HRES1P13985 223 aa11.55□□□□□ -0.56
PRPF39-201ENST00000355765 PLAC8Q9NZF1 115 aa11.55□□□□□ -0.56
PRPF39-201ENST00000355765 NBEAL1Q6ZS30 2694 aa11.54□□□□□ -0.56
PRPF39-201ENST00000355765 SPRR1BP22528 89 aa11.53□□□□□ -0.56
PRPF39-201ENST00000355765 LYSTQ99698 3801 aa11.51□□□□□ -0.57
PRPF39-201ENST00000355765 IGLV9-49A0A0B4J1Y8 123 aa11.5□□□□□ -0.57
PRPF39-201ENST00000355765 IGHV6-1A0A0B4J1U7 121 aa11.5□□□□□ -0.57
PRPF39-201ENST00000355765 Q96NJ1 140 aa11.5□□□□□ -0.57
PRPF39-201ENST00000355765 CMYA5Q8N3K9 4069 aa11.49□□□□□ -0.57
PRPF39-201ENST00000355765 C8orf17Q9NRJ1 99 aa11.49□□□□□ -0.57
PRPF39-201ENST00000355765 TP53AIP1Q9HCN2 124 aa11.49□□□□□ -0.57
PRPF39-201ENST00000355765 MGAM2Q2M2H8 2515 aa11.49□□□□□ -0.57
PRPF39-201ENST00000355765 KRTAP1-5Q9BYS1 174 aa11.48□□□□□ -0.57
PRPF39-201ENST00000355765 Q6ZR54 194 aa11.46□□□□□ -0.57
PRPF39-201ENST00000355765 PRR26Q8N8Z3 221 aa11.46□□□□□ -0.57
PRPF39-201ENST00000355765 ASB16-AS1Q495Z4 193 aa11.45□□□□□ -0.58
PRPF39-201ENST00000355765 K7EIL1 84 aa11.43□□□□□ -0.58
PRPF39-201ENST00000355765 A0A087X002 238 aa11.41□□□□□ -0.58
PRPF39-201ENST00000355765 NOTCH2NLQ7Z3S9 236 aa11.41□□□□□ -0.58
PRPF39-201ENST00000355765 PRAC1Q96KF2 57 aa11.41□□□□□ -0.58
PRPF39-201ENST00000355765 DNAH9Q9NYC9 4486 aa11.4□□□□□ -0.58
PRPF39-201ENST00000355765 A0A1B0GVX0 72 aa11.38□□□□□ -0.59
PRPF39-201ENST00000355765 LINC00313P59037 77 aa11.37□□□□□ -0.59
PRPF39-201ENST00000355765 MRPL34Q9BQ48 92 aaKnown RBP11.36□□□□□ -0.59
PRPF39-201ENST00000355765 PANO1I0J062 215 aa11.35□□□□□ -0.59
PRPF39-201ENST00000355765 CDK2AP2O75956 126 aa11.34□□□□□ -0.59
PRPF39-201ENST00000355765 ADM2Q7Z4H4 148 aa11.34□□□□□ -0.59
PRPF39-201ENST00000355765 MDFIQ99750 246 aa11.31□□□□□ -0.6
PRPF39-201ENST00000355765 KRTAP13-1Q8IUC0 172 aa11.3□□□□□ -0.6
PRPF39-201ENST00000355765 Q5W150 140 aa11.3□□□□□ -0.6
PRPF39-201ENST00000355765 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
PRPF39-201ENST00000355765 ANAPC11Q9NYG5 84 aa11.3□□□□□ -0.6
PRPF39-201ENST00000355765 C8orf87E5RJ46 101 aa11.29□□□□□ -0.6
PRPF39-201ENST00000355765 HUWE1Q7Z6Z7 4374 aaKnown RBP11.28□□□□□ -0.6
PRPF39-201ENST00000355765 SPINK6Q6UWN8 80 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms