RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 A0A096LNI7 61 aa11.4□□□□□ -0.58
PDZD3-202ENST00000355547 IGFL1Q6UW32 110 aa11.4□□□□□ -0.58
PDZD3-202ENST00000355547 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
PDZD3-202ENST00000355547 MEGF8Q7Z7M0 2845 aa11.38□□□□□ -0.59
PDZD3-202ENST00000355547 A0A1W2PNN7 141 aa11.38□□□□□ -0.59
PDZD3-202ENST00000355547 K7EIL1 84 aa11.38□□□□□ -0.59
PDZD3-202ENST00000355547 ZCCHC13Q8WW36 166 aaKnown RBP11.38□□□□□ -0.59
PDZD3-202ENST00000355547 PMAIP1Q13794 54 aa11.37□□□□□ -0.59
PDZD3-202ENST00000355547 KRTAP1-5Q9BYS1 174 aa11.37□□□□□ -0.59
PDZD3-202ENST00000355547 A0A0G2JQZ4 141 aa11.36□□□□□ -0.59
PDZD3-202ENST00000355547 HCG22E2RYF7 251 aa11.35□□□□□ -0.59
PDZD3-202ENST00000355547 PRLHP81277 87 aa11.35□□□□□ -0.59
PDZD3-202ENST00000355547 PSCAO43653 123 aa11.35□□□□□ -0.59
PDZD3-202ENST00000355547 IGKV2-24A0A0C4DH68 120 aa11.34□□□□□ -0.59
PDZD3-202ENST00000355547 C1orf64Q8NEQ6 169 aa11.33□□□□□ -0.6
PDZD3-202ENST00000355547 HUWE1Q7Z6Z7 4374 aaKnown RBP11.33□□□□□ -0.6
PDZD3-202ENST00000355547 PRKDCP78527 4128 aaKnown RBP11.31□□□□□ -0.6
PDZD3-202ENST00000355547 COL7A1Q02388 2944 aa11.31□□□□□ -0.6
PDZD3-202ENST00000355547 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.3□□□□□ -0.6
PDZD3-202ENST00000355547 CYP4F30PQ9H0H9 118 aa11.3□□□□□ -0.6
PDZD3-202ENST00000355547 A0A087WSZ3 146 aa11.29□□□□□ -0.6
PDZD3-202ENST00000355547 SPRR1BP22528 89 aa11.28□□□□□ -0.6
PDZD3-202ENST00000355547 H0Y9J4 135 aa11.28□□□□□ -0.6
PDZD3-202ENST00000355547 UBE2AP49459 152 aa11.26□□□□□ -0.61
PDZD3-202ENST00000355547 DEFB116Q30KQ4 102 aa11.26□□□□□ -0.61
PDZD3-202ENST00000355547 KRTAP11-1Q8IUC1 163 aa11.26□□□□□ -0.61
PDZD3-202ENST00000355547 C14orf177Q52M58 125 aa11.25□□□□□ -0.61
PDZD3-202ENST00000355547 TRAV22A0A0B4J277 110 aa11.24□□□□□ -0.61
PDZD3-202ENST00000355547 DNAH9Q9NYC9 4486 aa11.24□□□□□ -0.61
PDZD3-202ENST00000355547 PHF5AQ7RTV0 110 aaKnown RBP11.24□□□□□ -0.61
PDZD3-202ENST00000355547 KRTAP29-1A8MX34 341 aaPredicted RBP11.23□□□□□ -0.61
PDZD3-202ENST00000355547 LRCOL1A6NCL2 159 aa11.23□□□□□ -0.61
PDZD3-202ENST00000355547 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
PDZD3-202ENST00000355547 WFDC13Q8IUB5 93 aa11.21□□□□□ -0.61
PDZD3-202ENST00000355547 APLNQ9ULZ1 77 aa11.21□□□□□ -0.61
PDZD3-202ENST00000355547 DNAH10Q8IVF4 4471 aa11.2□□□□□ -0.62
PDZD3-202ENST00000355547 FBN3Q75N90 2809 aa11.19□□□□□ -0.62
PDZD3-202ENST00000355547 PSPHP1O15172 72 aa11.19□□□□□ -0.62
PDZD3-202ENST00000355547 RPL37AP61513 92 aaKnown RBP11.19□□□□□ -0.62
PDZD3-202ENST00000355547 UBE2DNLQ8IWF7 75 aa11.19□□□□□ -0.62
PDZD3-202ENST00000355547 C9orf163Q8N9P6 203 aa11.19□□□□□ -0.62
PDZD3-202ENST00000355547 LINC00472Q9H8W2 130 aa11.18□□□□□ -0.62
PDZD3-202ENST00000355547 NDUFB1O75438 58 aa11.17□□□□□ -0.62
PDZD3-202ENST00000355547 MP68P56378 58 aa11.16□□□□□ -0.62
PDZD3-202ENST00000355547 CD164Q04900 197 aa11.16□□□□□ -0.62
PDZD3-202ENST00000355547 STAB2Q8WWQ8 2551 aa11.15□□□□□ -0.62
PDZD3-202ENST00000355547 TGP01266 2768 aa11.14□□□□□ -0.63
PDZD3-202ENST00000355547 A8MWP4 228 aa11.14□□□□□ -0.63
PDZD3-202ENST00000355547 B9D2Q9BPU9 175 aa11.14□□□□□ -0.63
PDZD3-202ENST00000355547 CASC2Q6XLA1 102 aa11.13□□□□□ -0.63
PDZD3-202ENST00000355547 KRTAP13-1Q8IUC0 172 aa11.12□□□□□ -0.63
PDZD3-202ENST00000355547 A8MUN3 132 aa11.11□□□□□ -0.63
PDZD3-202ENST00000355547 H3BPC8 53 aa11.11□□□□□ -0.63
PDZD3-202ENST00000355547 SRRM2Q9UQ35 2752 aaKnown RBP11.1□□□□□ -0.63
PDZD3-202ENST00000355547 LINC00208Q96KT6 92 aa11.1□□□□□ -0.63
PDZD3-202ENST00000355547 LYSTQ99698 3801 aa11.09□□□□□ -0.63
PDZD3-202ENST00000355547 Q5VV11 94 aa11.09□□□□□ -0.63
PDZD3-202ENST00000355547 H0Y9P7 68 aa11.07□□□□□ -0.64
PDZD3-202ENST00000355547 PANO1I0J062 215 aa11.07□□□□□ -0.64
PDZD3-202ENST00000355547 PRR4Q16378 134 aa11.06□□□□□ -0.64
PDZD3-202ENST00000355547 Q6ZRN7 208 aaPredicted RBP11.06□□□□□ -0.64
PDZD3-202ENST00000355547 NBDYA0A0U1RRE5 68 aa11.06□□□□□ -0.64
PDZD3-202ENST00000355547 DYNC2H1Q8NCM8 4307 aaKnown RBP11.05□□□□□ -0.64
PDZD3-202ENST00000355547 SPANXA2-OT1Q8N9U9 137 aa11.05□□□□□ -0.64
PDZD3-202ENST00000355547 LIMD2Q9BT23 127 aa11.04□□□□□ -0.64
PDZD3-202ENST00000355547 MMP24-AS1A0A0U1RRL7 71 aa11.02□□□□□ -0.64
PDZD3-202ENST00000355547 Q8N9P0 234 aaPredicted RBP11□□□□□ -0.65
PDZD3-202ENST00000355547 KTN1-AS1Q86SY8 53 aa11□□□□□ -0.65
PDZD3-202ENST00000355547 CSMD3Q7Z407 3707 aa11□□□□□ -0.65
PDZD3-202ENST00000355547 SPACA4Q8TDM5 124 aa10.99□□□□□ -0.65
PDZD3-202ENST00000355547 Q96NJ1 140 aa10.98□□□□□ -0.65
PDZD3-202ENST00000355547 A8MU10 97 aa10.98□□□□□ -0.65
PDZD3-202ENST00000355547 ASB16-AS1Q495Z4 193 aa10.97□□□□□ -0.65
PDZD3-202ENST00000355547 LINC00483Q53H64 154 aa10.97□□□□□ -0.65
PDZD3-202ENST00000355547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.97□□□□□ -0.65
PDZD3-202ENST00000355547 CHKB-CPT1BH3BT56 60 aa10.96□□□□□ -0.65
PDZD3-202ENST00000355547 TENM2Q9NT68 2774 aa10.96□□□□□ -0.65
PDZD3-202ENST00000355547 DNAH7Q8WXX0 4024 aa10.95□□□□□ -0.66
PDZD3-202ENST00000355547 NUPR2A6NF83 97 aa10.94□□□□□ -0.66
PDZD3-202ENST00000355547 IGLV9-49A0A0B4J1Y8 123 aa10.93□□□□□ -0.66
PDZD3-202ENST00000355547 ATP11AUNQ6ZP68 121 aa10.93□□□□□ -0.66
PDZD3-202ENST00000355547 Q75L30 129 aa10.92□□□□□ -0.66
PDZD3-202ENST00000355547 PRR15LQ9BU68 103 aa10.91□□□□□ -0.66
PDZD3-202ENST00000355547 MOBPQ13875 183 aa10.91□□□□□ -0.66
PDZD3-202ENST00000355547 LOC101927531A0A1B0GV80 90 aa10.9□□□□□ -0.66
PDZD3-202ENST00000355547 NDUFS5O43920 106 aa10.89□□□□□ -0.67
PDZD3-202ENST00000355547 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
PDZD3-202ENST00000355547 STARD9Q9P2P6 4700 aa10.89□□□□□ -0.67
PDZD3-202ENST00000355547 PLECQ15149 4684 aaKnown RBP10.89□□□□□ -0.67
PDZD3-202ENST00000355547 ZNF706Q9Y5V0 76 aaPredicted RBP10.88□□□□□ -0.67
PDZD3-202ENST00000355547 C8orf17Q9NRJ1 99 aa10.88□□□□□ -0.67
PDZD3-202ENST00000355547 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
PDZD3-202ENST00000355547 A0A087WTM6 91 aa10.87□□□□□ -0.67
PDZD3-202ENST00000355547 WWC2-AS2Q96NR7 200 aa10.87□□□□□ -0.67
PDZD3-202ENST00000355547 IGLV7-46A0A075B6I9 117 aa10.87□□□□□ -0.67
PDZD3-202ENST00000355547 LCA10Q71F78 164 aa10.86□□□□□ -0.67
PDZD3-202ENST00000355547 A6NN06 94 aa10.85□□□□□ -0.67
PDZD3-202ENST00000355547 IGLV5-52A0A0A0MRZ9 124 aa10.84□□□□□ -0.67
PDZD3-202ENST00000355547 Q6ZR54 194 aa10.84□□□□□ -0.67
PDZD3-202ENST00000355547 PSORS1C2Q9UIG4 136 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms