RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 RETNLBQ9BQ08 111 aa7.99□□□□□ -1.13
PCDHB11-201ENST00000354757 KRTAP1-5Q9BYS1 174 aa7.99□□□□□ -1.13
PCDHB11-201ENST00000354757 TNP2Q05952 138 aa7.98□□□□□ -1.13
PCDHB11-201ENST00000354757 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
PCDHB11-201ENST00000354757 ZNF469Q96JG9 3925 aaPredicted RBP7.97□□□□□ -1.13
PCDHB11-201ENST00000354757 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
PCDHB11-201ENST00000354757 DMBT1Q9UGM3 2413 aaPredicted RBP7.97□□□□□ -1.13
PCDHB11-201ENST00000354757 SPACA4Q8TDM5 124 aa7.96□□□□□ -1.13
PCDHB11-201ENST00000354757 Q5XG85 94 aa7.96□□□□□ -1.13
PCDHB11-201ENST00000354757 ERC2-IT1O76042 136 aa7.96□□□□□ -1.14
PCDHB11-201ENST00000354757 Q8NDZ9 215 aa7.96□□□□□ -1.14
PCDHB11-201ENST00000354757 KLKP1Q107X0 134 aa7.95□□□□□ -1.14
PCDHB11-201ENST00000354757 SEC61GP60059 68 aa7.95□□□□□ -1.14
PCDHB11-201ENST00000354757 BCE1O60756 84 aa7.94□□□□□ -1.14
PCDHB11-201ENST00000354757 OBSCN-AS1Q96MR7 158 aa7.94□□□□□ -1.14
PCDHB11-201ENST00000354757 SMIM29Q86T20 159 aa7.94□□□□□ -1.14
PCDHB11-201ENST00000354757 LOC110117498A0A087WWA1 95 aa7.93□□□□□ -1.14
PCDHB11-201ENST00000354757 PMAIP1Q13794 54 aa7.93□□□□□ -1.14
PCDHB11-201ENST00000354757 CHKB-CPT1BH3BT56 60 aa7.92□□□□□ -1.14
PCDHB11-201ENST00000354757 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
PCDHB11-201ENST00000354757 LINC00208Q96KT6 92 aa7.92□□□□□ -1.14
PCDHB11-201ENST00000354757 Q8NBF4 154 aa7.91□□□□□ -1.14
PCDHB11-201ENST00000354757 CASC2Q6XLA1 102 aa7.91□□□□□ -1.14
PCDHB11-201ENST00000354757 Q8N377 158 aa7.91□□□□□ -1.14
PCDHB11-201ENST00000354757 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.15
PCDHB11-201ENST00000354757 PSORS1C2Q9UIG4 136 aa7.89□□□□□ -1.15
PCDHB11-201ENST00000354757 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
PCDHB11-201ENST00000354757 A6NED7 52 aa7.88□□□□□ -1.15
PCDHB11-201ENST00000354757 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
PCDHB11-201ENST00000354757 TGP01266 2768 aa7.86□□□□□ -1.15
PCDHB11-201ENST00000354757 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
PCDHB11-201ENST00000354757 PCOTHQ58A44 107 aa7.86□□□□□ -1.15
PCDHB11-201ENST00000354757 FP248Q71RG6 208 aaPredicted RBP7.84□□□□□ -1.15
PCDHB11-201ENST00000354757 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
PCDHB11-201ENST00000354757 PRR15LQ9BU68 103 aa7.84□□□□□ -1.15
PCDHB11-201ENST00000354757 IGFL1Q6UW32 110 aa7.83□□□□□ -1.16
PCDHB11-201ENST00000354757 HCG22E2RYF7 251 aa7.83□□□□□ -1.16
PCDHB11-201ENST00000354757 FAM229AH3BQW9 127 aa7.82□□□□□ -1.16
PCDHB11-201ENST00000354757 ZNF861PO60384 105 aa7.82□□□□□ -1.16
PCDHB11-201ENST00000354757 TENM2Q9NT68 2774 aa7.81□□□□□ -1.16
PCDHB11-201ENST00000354757 KRTAP26-1Q6PEX3 210 aa7.81□□□□□ -1.16
PCDHB11-201ENST00000354757 TRBV7-4A0A0J9YYF1 115 aa7.8□□□□□ -1.16
PCDHB11-201ENST00000354757 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
PCDHB11-201ENST00000354757 PLA2G2DQ9UNK4 145 aa7.78□□□□□ -1.16
PCDHB11-201ENST00000354757 A8MUN3 132 aa7.78□□□□□ -1.16
PCDHB11-201ENST00000354757 K7EQZ3 153 aa7.78□□□□□ -1.16
PCDHB11-201ENST00000354757 FAM229BQ4G0N7 80 aa7.78□□□□□ -1.16
PCDHB11-201ENST00000354757 C1orf64Q8NEQ6 169 aa7.78□□□□□ -1.16
PCDHB11-201ENST00000354757 H0Y9P7 68 aa7.76□□□□□ -1.17
PCDHB11-201ENST00000354757 A0A1W2PNM2 257 aa7.76□□□□□ -1.17
PCDHB11-201ENST00000354757 IGLV7-43P04211 117 aa7.76□□□□□ -1.17
PCDHB11-201ENST00000354757 IGKV2D-30A0A075B6S6 120 aa7.75□□□□□ -1.17
PCDHB11-201ENST00000354757 IGKV2-30P06310 120 aa7.75□□□□□ -1.17
PCDHB11-201ENST00000354757 LIMD2Q9BT23 127 aa7.75□□□□□ -1.17
PCDHB11-201ENST00000354757 AKAP9Q99996 3911 aa7.74□□□□□ -1.17
PCDHB11-201ENST00000354757 hDV103S1A0JD37 113 aa7.74□□□□□ -1.17
PCDHB11-201ENST00000354757 PANO1I0J062 215 aa7.73□□□□□ -1.17
PCDHB11-201ENST00000354757 SPRR4Q96PI1 79 aa7.72□□□□□ -1.17
PCDHB11-201ENST00000354757 KRTAP10-2P60368 255 aa7.71□□□□□ -1.18
PCDHB11-201ENST00000354757 OCR1Q9BZK8 76 aa7.7□□□□□ -1.18
PCDHB11-201ENST00000354757 TRAV22A0A0B4J277 110 aa7.7□□□□□ -1.18
PCDHB11-201ENST00000354757 SPINK1P00995 79 aa7.7□□□□□ -1.18
PCDHB11-201ENST00000354757 IGLV5-37A0A075B6J1 123 aa7.7□□□□□ -1.18
PCDHB11-201ENST00000354757 TRRAPQ9Y4A5 3859 aa7.69□□□□□ -1.18
PCDHB11-201ENST00000354757 SRRM2Q9UQ35 2752 aaKnown RBP7.68□□□□□ -1.18
PCDHB11-201ENST00000354757 LINC00313P59037 77 aa7.65□□□□□ -1.18
PCDHB11-201ENST00000354757 DSCR10P59022 87 aa7.64□□□□□ -1.19
PCDHB11-201ENST00000354757 SPAG11AQ6PDA7 123 aa7.64□□□□□ -1.19
PCDHB11-201ENST00000354757 Q96NJ1 140 aa7.64□□□□□ -1.19
PCDHB11-201ENST00000354757 IGLV5-48A0A075B6I7 105 aa7.63□□□□□ -1.19
PCDHB11-201ENST00000354757 A0A1B0GW54 56 aa7.63□□□□□ -1.19
PCDHB11-201ENST00000354757 A8MWP4 228 aa7.63□□□□□ -1.19
PCDHB11-201ENST00000354757 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
PCDHB11-201ENST00000354757 KRTAP10-1P60331 282 aa7.62□□□□□ -1.19
PCDHB11-201ENST00000354757 LINC00304Q8N9R0 145 aa7.62□□□□□ -1.19
PCDHB11-201ENST00000354757 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
PCDHB11-201ENST00000354757 PRR26Q8N8Z3 221 aa7.61□□□□□ -1.19
PCDHB11-201ENST00000354757 SPRR1AP35321 89 aa7.6□□□□□ -1.19
PCDHB11-201ENST00000354757 PRR15Q8IV56 129 aa7.6□□□□□ -1.19
PCDHB11-201ENST00000354757 Q6ZR54 194 aa7.59□□□□□ -1.2
PCDHB11-201ENST00000354757 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.2
PCDHB11-201ENST00000354757 J3QL48 77 aa7.56□□□□□ -1.2
PCDHB11-201ENST00000354757 C8orf17Q9NRJ1 99 aa7.56□□□□□ -1.2
PCDHB11-201ENST00000354757 MRPL34Q9BQ48 92 aaKnown RBP7.56□□□□□ -1.2
PCDHB11-201ENST00000354757 LCE6AA0A183 80 aa7.55□□□□□ -1.2
PCDHB11-201ENST00000354757 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
PCDHB11-201ENST00000354757 A0A1B0GVX0 72 aa7.54□□□□□ -1.2
PCDHB11-201ENST00000354757 Q1T7F1 81 aa7.54□□□□□ -1.2
PCDHB11-201ENST00000354757 COA5Q86WW8 74 aa7.53□□□□□ -1.2
PCDHB11-201ENST00000354757 Q6ZRN7 208 aaPredicted RBP7.53□□□□□ -1.2
PCDHB11-201ENST00000354757 TP53AIP1Q9HCN2 124 aa7.52□□□□□ -1.2
PCDHB11-201ENST00000354757 CD164Q04900 197 aa7.52□□□□□ -1.21
PCDHB11-201ENST00000354757 KRTAP7-1Q8IUC3 87 aa7.51□□□□□ -1.21
PCDHB11-201ENST00000354757 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
PCDHB11-201ENST00000354757 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
PCDHB11-201ENST00000354757 KTN1-AS1Q86SY8 53 aa7.47□□□□□ -1.21
PCDHB11-201ENST00000354757 H3BPC8 53 aa7.46□□□□□ -1.22
PCDHB11-201ENST00000354757 LOC101927531A0A1B0GV80 90 aa7.46□□□□□ -1.22
PCDHB11-201ENST00000354757 CYP4F30PQ9H0H9 118 aa7.45□□□□□ -1.22
PCDHB11-201ENST00000354757 ATP11AUNQ6ZP68 121 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms