RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CXCL6P80162 114 aa7.02□□□□□ -1.29
RTN3-204ENST00000354497 SS18Q15532 418 aa7.02□□□□□ -1.29
RTN3-204ENST00000354497 PIK3CD-AS1Q5SR53 167 aa7.02□□□□□ -1.29
RTN3-204ENST00000354497 LINC00269Q8N2A0 174 aa7.02□□□□□ -1.29
RTN3-204ENST00000354497 UBL5Q9BZL1 73 aa7.02□□□□□ -1.29
RTN3-204ENST00000354497 PLAC8Q9NZF1 115 aa7.02□□□□□ -1.29
RTN3-204ENST00000354497 IGLV4-3A0A075B6K6 122 aa7.01□□□□□ -1.29
RTN3-204ENST00000354497 PHF5AQ7RTV0 110 aaKnown RBP7.01□□□□□ -1.29
RTN3-204ENST00000354497 TRAV23DV6A0A075B6W5 121 aa7.01□□□□□ -1.29
RTN3-204ENST00000354497 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
RTN3-204ENST00000354497 TRBV10-1A0A0K0K1A3 114 aa7.01□□□□□ -1.29
RTN3-204ENST00000354497 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
RTN3-204ENST00000354497 KRTAP26-1Q6PEX3 210 aa7□□□□□ -1.29
RTN3-204ENST00000354497 FAM19A3Q7Z5A8 133 aa7□□□□□ -1.29
RTN3-204ENST00000354497 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
RTN3-204ENST00000354497 RBM12B-AS1Q9P1G2 102 aa7□□□□□ -1.29
RTN3-204ENST00000354497 PHLDA3Q9Y5J5 127 aa7□□□□□ -1.29
RTN3-204ENST00000354497 IGLV5-39A0A0G2JS06 123 aa6.99□□□□□ -1.29
RTN3-204ENST00000354497 RPL39P62891 51 aaKnown RBP6.99□□□□□ -1.29
RTN3-204ENST00000354497 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
RTN3-204ENST00000354497 ZNF625Q96I27 306 aaPredicted RBP6.99□□□□□ -1.29
RTN3-204ENST00000354497 FAM218AQ96MZ4 157 aa6.99□□□□□ -1.29
RTN3-204ENST00000354497 H3BQ85 93 aa6.98□□□□□ -1.29
RTN3-204ENST00000354497 SLPIP03973 132 aa6.98□□□□□ -1.29
RTN3-204ENST00000354497 COX6A2Q02221 97 aa6.98□□□□□ -1.29
RTN3-204ENST00000354497 PRR34Q9NV39 138 aa6.98□□□□□ -1.29
RTN3-204ENST00000354497 PDE6GP18545 87 aa6.97□□□□□ -1.29
RTN3-204ENST00000354497 UBE2BP63146 152 aa6.97□□□□□ -1.29
RTN3-204ENST00000354497 REG3AQ06141 175 aa6.97□□□□□ -1.29
RTN3-204ENST00000354497 Q6ZVQ6 151 aa6.97□□□□□ -1.29
RTN3-204ENST00000354497 MUC2Q02817 5179 aa6.96□□□□□ -1.3
RTN3-204ENST00000354497 SUMO4Q6EEV6 95 aa6.96□□□□□ -1.3
RTN3-204ENST00000354497 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
RTN3-204ENST00000354497 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
RTN3-204ENST00000354497 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
RTN3-204ENST00000354497 MGPP08493 103 aa6.95□□□□□ -1.3
RTN3-204ENST00000354497 OPRPNQ99935 248 aaPredicted RBP6.95□□□□□ -1.3
RTN3-204ENST00000354497 ORMDL1Q9P0S3 153 aa6.95□□□□□ -1.3
RTN3-204ENST00000354497 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
RTN3-204ENST00000354497 F5H697 171 aa6.94□□□□□ -1.3
RTN3-204ENST00000354497 NTM-AS1Q6ZSK4 140 aa6.94□□□□□ -1.3
RTN3-204ENST00000354497 TMEM254Q8TBM7 123 aa6.94□□□□□ -1.3
RTN3-204ENST00000354497 TMEM256-PLSCR3K7ERE1 68 aa6.93□□□□□ -1.3
RTN3-204ENST00000354497 M0R378 163 aa6.93□□□□□ -1.3
RTN3-204ENST00000354497 UBE2L6O14933 153 aa6.93□□□□□ -1.3
RTN3-204ENST00000354497 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
RTN3-204ENST00000354497 M0QY20 66 aa6.93□□□□□ -1.3
RTN3-204ENST00000354497 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
RTN3-204ENST00000354497 FAM104AQ969W3 186 aa6.93□□□□□ -1.3
RTN3-204ENST00000354497 PRYO14603 147 aa6.92□□□□□ -1.3
RTN3-204ENST00000354497 FAM229BQ4G0N7 80 aa6.92□□□□□ -1.3
RTN3-204ENST00000354497 ATP11AUNQ6ZP68 121 aa6.92□□□□□ -1.3
RTN3-204ENST00000354497 Q6ZRP5 223 aa6.92□□□□□ -1.3
RTN3-204ENST00000354497 MPLKIPQ8TAP9 179 aa6.92□□□□□ -1.3
RTN3-204ENST00000354497 A0A096LNI7 61 aa6.91□□□□□ -1.3
RTN3-204ENST00000354497 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
RTN3-204ENST00000354497 MIR7-3HGQ8N6C7 128 aa6.91□□□□□ -1.3
RTN3-204ENST00000354497 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
RTN3-204ENST00000354497 CYP4F30PQ9H0H9 118 aa6.91□□□□□ -1.3
RTN3-204ENST00000354497 SNURFQ9Y675 71 aa6.91□□□□□ -1.3
RTN3-204ENST00000354497 SOSTDC1Q6X4U4 206 aa6.9□□□□□ -1.31
RTN3-204ENST00000354497 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
RTN3-204ENST00000354497 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
RTN3-204ENST00000354497 PRR4Q16378 134 aa6.89□□□□□ -1.31
RTN3-204ENST00000354497 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
RTN3-204ENST00000354497 IGKV2-29A2NJV5 120 aaPredicted RBP6.88□□□□□ -1.31
RTN3-204ENST00000354497 NREPQ16612 68 aa6.88□□□□□ -1.31
RTN3-204ENST00000354497 UBE2AP49459 152 aa6.87□□□□□ -1.31
RTN3-204ENST00000354497 NCR3O14931 201 aa6.86□□□□□ -1.31
RTN3-204ENST00000354497 VPREB1P12018 145 aa6.86□□□□□ -1.31
RTN3-204ENST00000354497 SMIM11BQ8TCY0 68 aa6.86□□□□□ -1.31
RTN3-204ENST00000354497 Q6ZQT0 140 aa6.85□□□□□ -1.31
RTN3-204ENST00000354497 LCA10Q71F78 164 aa6.85□□□□□ -1.31
RTN3-204ENST00000354497 PRR26Q8N8Z3 221 aa6.85□□□□□ -1.31
RTN3-204ENST00000354497 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
RTN3-204ENST00000354497 A0A087X002 238 aa6.84□□□□□ -1.31
RTN3-204ENST00000354497 ZNF73O43830 326 aaPredicted RBP6.84□□□□□ -1.31
RTN3-204ENST00000354497 DIRC1Q969H9 104 aa6.84□□□□□ -1.31
RTN3-204ENST00000354497 A0A087WZ39 114 aa6.84□□□□□ -1.32
RTN3-204ENST00000354497 A0A1B0GUV1 79 aa6.84□□□□□ -1.32
RTN3-204ENST00000354497 C8orf87E5RJ46 101 aa6.84□□□□□ -1.32
RTN3-204ENST00000354497 SYCNQ0VAF6 134 aa6.84□□□□□ -1.32
RTN3-204ENST00000354497 OCR1Q9BZK8 76 aa6.84□□□□□ -1.32
RTN3-204ENST00000354497 IGKV2-28A0A075B6P5 120 aa6.83□□□□□ -1.32
RTN3-204ENST00000354497 GVQW2A0A096LPI5 108 aaPredicted RBP6.83□□□□□ -1.32
RTN3-204ENST00000354497 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
RTN3-204ENST00000354497 A6NN06 94 aa6.83□□□□□ -1.32
RTN3-204ENST00000354497 IGKV2D-28P01615 120 aa6.83□□□□□ -1.32
RTN3-204ENST00000354497 C7orf65Q6ZTY9 151 aa6.83□□□□□ -1.32
RTN3-204ENST00000354497 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
RTN3-204ENST00000354497 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
RTN3-204ENST00000354497 C1orf137Q5JT78 98 aa6.82□□□□□ -1.32
RTN3-204ENST00000354497 LIMD2Q9BT23 127 aa6.82□□□□□ -1.32
RTN3-204ENST00000354497 CDKN2A-AS1Q9UH64 79 aa6.82□□□□□ -1.32
RTN3-204ENST00000354497 ELOF1P60002 83 aaKnown RBP6.81□□□□□ -1.32
RTN3-204ENST00000354497 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
RTN3-204ENST00000354497 SMIM1B2RUZ4 78 aa6.8□□□□□ -1.32
RTN3-204ENST00000354497 BPY2O14599 106 aa6.8□□□□□ -1.32
RTN3-204ENST00000354497 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
RTN3-204ENST00000354497 ASB16-AS1Q495Z4 193 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms