RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 VPS25Q9BRG1 176 aa7.06□□□□□ -1.28
CDRT1-202ENST00000354433 DHRS4-AS1Q9P1J3 65 aa7.06□□□□□ -1.28
CDRT1-202ENST00000354433 FAM240AA0A1B0GVK7 77 aa7.05□□□□□ -1.28
CDRT1-202ENST00000354433 RPL37AP8A6NKH3 93 aa7.05□□□□□ -1.28
CDRT1-202ENST00000354433 B5MCH6 92 aa7.05□□□□□ -1.28
CDRT1-202ENST00000354433 JMJD7-PLA2G4BH0Y9G9 81 aa7.05□□□□□ -1.28
CDRT1-202ENST00000354433 Q6ZQY7 126 aa7.05□□□□□ -1.28
CDRT1-202ENST00000354433 Q6ZRX8 168 aa7.05□□□□□ -1.28
CDRT1-202ENST00000354433 ETDCA0A1B0GVM5 59 aa7.04□□□□□ -1.28
CDRT1-202ENST00000354433 ACYP1P07311 99 aa7.03□□□□□ -1.28
CDRT1-202ENST00000354433 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
CDRT1-202ENST00000354433 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
CDRT1-202ENST00000354433 KRTAP11-1Q8IUC1 163 aa7□□□□□ -1.29
CDRT1-202ENST00000354433 H0Y9J4 135 aa6.99□□□□□ -1.29
CDRT1-202ENST00000354433 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
CDRT1-202ENST00000354433 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
CDRT1-202ENST00000354433 CDIP1Q9H305 208 aa6.99□□□□□ -1.29
CDRT1-202ENST00000354433 Q9BRP9 147 aa6.99□□□□□ -1.29
CDRT1-202ENST00000354433 RBM3P98179 157 aaKnown RBP6.98□□□□□ -1.29
CDRT1-202ENST00000354433 C14orf132Q9NPU4 83 aa6.98□□□□□ -1.29
CDRT1-202ENST00000354433 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
CDRT1-202ENST00000354433 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
CDRT1-202ENST00000354433 LOC110117498A0A087WWA1 95 aa6.97□□□□□ -1.29
CDRT1-202ENST00000354433 PDE6GP18545 87 aa6.97□□□□□ -1.29
CDRT1-202ENST00000354433 CCKP06307 115 aa6.96□□□□□ -1.29
CDRT1-202ENST00000354433 NDUFV3P56181 108 aaKnown RBP6.96□□□□□ -1.29
CDRT1-202ENST00000354433 PRR26Q8N8Z3 221 aa6.96□□□□□ -1.29
CDRT1-202ENST00000354433 FAM19A1Q7Z5A9 133 aa6.95□□□□□ -1.3
CDRT1-202ENST00000354433 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
CDRT1-202ENST00000354433 LINC01547P58512 204 aaPredicted RBP6.95□□□□□ -1.3
CDRT1-202ENST00000354433 GAGE2AQ6NT46 116 aa6.95□□□□□ -1.3
CDRT1-202ENST00000354433 SMCR5Q8TEV8 140 aa6.95□□□□□ -1.3
CDRT1-202ENST00000354433 Q8N377 158 aa6.94□□□□□ -1.3
CDRT1-202ENST00000354433 DSCR8Q96T75 97 aa6.94□□□□□ -1.3
CDRT1-202ENST00000354433 LRP2P98164 4655 aa6.93□□□□□ -1.3
CDRT1-202ENST00000354433 BCE1O60756 84 aa6.93□□□□□ -1.3
CDRT1-202ENST00000354433 Q6ZQT0 140 aa6.93□□□□□ -1.3
CDRT1-202ENST00000354433 TRBV7-4A0A0J9YYF1 115 aa6.92□□□□□ -1.3
CDRT1-202ENST00000354433 ZNF861PO60384 105 aa6.92□□□□□ -1.3
CDRT1-202ENST00000354433 ERC2-IT1O76042 136 aa6.91□□□□□ -1.3
CDRT1-202ENST00000354433 PRLHP81277 87 aa6.91□□□□□ -1.3
CDRT1-202ENST00000354433 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
CDRT1-202ENST00000354433 DEFB105AQ8NG35 78 aa6.91□□□□□ -1.3
CDRT1-202ENST00000354433 A0A1B0GV72 72 aa6.9□□□□□ -1.31
CDRT1-202ENST00000354433 KRTAP1-4P0C5Y4 121 aa6.9□□□□□ -1.31
CDRT1-202ENST00000354433 UBE2AP49459 152 aa6.9□□□□□ -1.31
CDRT1-202ENST00000354433 ST20-AS1Q8NBB2 130 aa6.9□□□□□ -1.31
CDRT1-202ENST00000354433 LINC00643Q86TS7 51 aa6.89□□□□□ -1.31
CDRT1-202ENST00000354433 HIGD2AQ9BW72 106 aa6.89□□□□□ -1.31
CDRT1-202ENST00000354433 SPRR1BP22528 89 aa6.88□□□□□ -1.31
CDRT1-202ENST00000354433 MT-ATP8P03928 68 aa6.87□□□□□ -1.31
CDRT1-202ENST00000354433 SCGB1A1P11684 91 aa6.87□□□□□ -1.31
CDRT1-202ENST00000354433 A0A1B0GW54 56 aa6.86□□□□□ -1.31
CDRT1-202ENST00000354433 LINC00846Q9NV44 126 aa6.86□□□□□ -1.31
CDRT1-202ENST00000354433 SMIM29Q86T20 159 aa6.86□□□□□ -1.31
CDRT1-202ENST00000354433 Q6Q795 121 aa6.85□□□□□ -1.31
CDRT1-202ENST00000354433 IGLV8-61A0A075B6I0 122 aa6.84□□□□□ -1.31
CDRT1-202ENST00000354433 F8WEM9 126 aa6.84□□□□□ -1.31
CDRT1-202ENST00000354433 IMUPQ9GZP8 106 aa6.84□□□□□ -1.31
CDRT1-202ENST00000354433 TRBV7-7A0A0K0K1E9 115 aa6.83□□□□□ -1.32
CDRT1-202ENST00000354433 Q6JHZ5 121 aa6.83□□□□□ -1.32
CDRT1-202ENST00000354433 LPAP08519 4548 aa6.82□□□□□ -1.32
CDRT1-202ENST00000354433 C3orf22Q8N5N4 141 aa6.82□□□□□ -1.32
CDRT1-202ENST00000354433 UBL5Q9BZL1 73 aa6.82□□□□□ -1.32
CDRT1-202ENST00000354433 ZNF706Q9Y5V0 76 aaPredicted RBP6.82□□□□□ -1.32
CDRT1-202ENST00000354433 CRYGAP11844 174 aa6.82□□□□□ -1.32
CDRT1-202ENST00000354433 PRR4Q16378 134 aa6.82□□□□□ -1.32
CDRT1-202ENST00000354433 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
CDRT1-202ENST00000354433 RNF213Q63HN8 5207 aa6.81□□□□□ -1.32
CDRT1-202ENST00000354433 A0A087X002 238 aa6.81□□□□□ -1.32
CDRT1-202ENST00000354433 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
CDRT1-202ENST00000354433 TYMSOSQ8TAI1 123 aa6.81□□□□□ -1.32
CDRT1-202ENST00000354433 LINC00483Q53H64 154 aa6.8□□□□□ -1.32
CDRT1-202ENST00000354433 Q8NBF4 154 aa6.79□□□□□ -1.32
CDRT1-202ENST00000354433 SPRR4Q96PI1 79 aa6.79□□□□□ -1.32
CDRT1-202ENST00000354433 ANAPC11Q9NYG5 84 aa6.79□□□□□ -1.32
CDRT1-202ENST00000354433 A0A1W2PNM2 257 aa6.77□□□□□ -1.33
CDRT1-202ENST00000354433 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
CDRT1-202ENST00000354433 Q6ZVQ6 151 aa6.77□□□□□ -1.33
CDRT1-202ENST00000354433 IGFL1Q6UW32 110 aa6.76□□□□□ -1.33
CDRT1-202ENST00000354433 CXCL6P80162 114 aa6.74□□□□□ -1.33
CDRT1-202ENST00000354433 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
CDRT1-202ENST00000354433 PCP4P48539 62 aa6.74□□□□□ -1.33
CDRT1-202ENST00000354433 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
CDRT1-202ENST00000354433 NREPQ16612 68 aa6.73□□□□□ -1.33
CDRT1-202ENST00000354433 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
CDRT1-202ENST00000354433 LINC00304Q8N9R0 145 aa6.73□□□□□ -1.33
CDRT1-202ENST00000354433 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
CDRT1-202ENST00000354433 RETNLBQ9BQ08 111 aa6.69□□□□□ -1.34
CDRT1-202ENST00000354433 HIST1H4AP62805 103 aaKnown RBP6.67□□□□□ -1.34
CDRT1-202ENST00000354433 C9orf153Q5TBE3 101 aa6.67□□□□□ -1.34
CDRT1-202ENST00000354433 IGLV9-49A0A0B4J1Y8 123 aa6.66□□□□□ -1.34
CDRT1-202ENST00000354433 FAM236AA0A1B0GUQ0 79 aa6.66□□□□□ -1.34
CDRT1-202ENST00000354433 FAM236BA0A1B0GV22 79 aa6.66□□□□□ -1.34
CDRT1-202ENST00000354433 A0A0G2JQZ4 141 aa6.65□□□□□ -1.34
CDRT1-202ENST00000354433 BPY2O14599 106 aa6.65□□□□□ -1.34
CDRT1-202ENST00000354433 A0A087WSZ3 146 aa6.65□□□□□ -1.35
CDRT1-202ENST00000354433 MOBPQ13875 183 aa6.64□□□□□ -1.35
CDRT1-202ENST00000354433 SSBP3-AS1Q7Z2R9 100 aa6.64□□□□□ -1.35
CDRT1-202ENST00000354433 MUC2Q02817 5179 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms