RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 HHLA3Q9XRX5 114 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 FAM215AQ9Y5M1 114 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 FREM3P0C091 2139 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 ETDCA0A1B0GVM5 59 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 KRTAP10-8P60410 259 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB103AP81534 67 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 TTTY12Q9BZ98 90 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 ABCA4P78363 2273 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV7-3A0A075B6L6 115 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV7-1A0A0A6YYK4 115 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 A0A1W2PNU3 283 aaPredicted RBP0.81□□□□□ -2.28
BRCA1-202ENST00000354071 P0C880 135 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 CCL3L1P16619 93 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 RPS28P62857 69 aaKnown RBP0.81□□□□□ -2.28
BRCA1-202ENST00000354071 SPAG11BQ08648 103 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 DIAPH2-AS1Q14236 149 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 C10orf55Q5SWW7 151 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 MRPL36Q9P0J6 103 aaKnown RBP0.81□□□□□ -2.28
BRCA1-202ENST00000354071 KLK9Q9UKQ9 250 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 MYO5AQ9Y4I1 1855 aaKnown RBP0.81□□□□□ -2.28
BRCA1-202ENST00000354071 C2orf70A6NJV1 201 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB130BP0DP73 79 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB130AP0DP74 79 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 CFAP126Q5VTH2 177 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 Q6ZS92 163 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 C5orf38Q86SI9 138 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 C20orf166-AS1Q96NR2 134 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 WFDC10AQ9H1F0 79 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 TNCP24821 2201 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 EML6Q6ZMW3 1958 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 SORL1Q92673 2214 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV7-6A0A0J9YX20 115 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV30A0A0K0K1B3 111 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 ANGP03950 147 aaKnown RBP0.81□□□□□ -2.28
BRCA1-202ENST00000354071 QRFPP83859 136 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 UBE2DNLQ8IWF7 75 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 DIRC1Q969H9 104 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 RHPN1-AS1Q9BWJ2 59 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 TMEM14CQ9P0S9 112 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 MED13Q9UHV7 2174 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.81□□□□□ -2.28
BRCA1-202ENST00000354071 IGHV1-58A0A0C4DH39 117 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV2-29A2NJV5 120 aaPredicted RBP0.81□□□□□ -2.28
BRCA1-202ENST00000354071 NCR3O14931 201 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV1-17P01599 117 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 CCL4P13236 92 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 SPINK13Q1W4C9 94 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 LELP1Q5T871 98 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 Q6JHZ5 121 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 SPAG11AQ6PDA7 123 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 WFDC10BQ8IUB3 73 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 USMG5Q96IX5 58 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 LIMD2Q9BT23 127 aa0.81□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV7-7A0A0K0K1E9 115 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 IGHV3-33P01772 117 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 RNASE3P12724 160 aaKnown RBP0.8□□□□□ -2.28
BRCA1-202ENST00000354071 COX7BP24311 80 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB131AP59861 70 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 ESRGQ1W209 222 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 BRD3OSQ6XYD6 125 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 TMEM14BQ9NUH8 114 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 ROS1P08922 2347 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 MED12LQ86YW9 2145 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 FAM223BA6NKX1 122 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 NDUFA4O00483 81 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 CCKP06307 115 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 RPL39P62891 51 aaKnown RBP0.8□□□□□ -2.28
BRCA1-202ENST00000354071 FAM223AQ8IWN6 122 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 Q8N6K4 173 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 TMEM254Q8TBM7 123 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 RPL39LQ96EH5 51 aaKnown RBP0.8□□□□□ -2.28
BRCA1-202ENST00000354071 NDUFA4L2Q9NRX3 87 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 LENEPQ9Y5L5 61 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 MUC12Q9UKN1 5478 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 DENND4CQ5VZ89 1909 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 A0A0J9YY99 117 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV10-1A0A0K0K1A3 114 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 IBA57-AS1B1ANH7 110 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 H3BRN7 92 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 UBE2D2P62837 147 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 MINOS1Q5TGZ0 78 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 Q5XG85 94 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 CLPSL2Q6UWE3 100 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 WFDC13Q8IUB5 93 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 LINC00269Q8N2A0 174 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 LINC00208Q96KT6 92 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 ACACAQ13085 2346 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 FAT1Q14517 4588 aa0.8□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV1D-17A0A075B6S4 117 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 A0A087WVE0 104 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 A0A096LPF7 62 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV2-24A0A0C4DH68 120 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 NDUFA1O15239 70 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 Q6ZQY7 126 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 VMO1Q7Z5L0 202 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 XAGE1AQ9HD64 81 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 PDCD11Q14690 1871 aaKnown RBP0.79□□□□□ -2.28
BRCA1-202ENST00000354071 IGHV3-30P01768 117 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 IGHV3-30-5P0DP03 117 aa0.79□□□□□ -2.28
BRCA1-202ENST00000354071 KRTAP10-1P60331 282 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms