RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 IGKV3D-7A0A0C4DH55 119 aa13.81□□□□□ -0.2
TNFRSF10B-202ENST00000347739 DNAH5Q8TE73 4624 aa13.8□□□□□ -0.2
TNFRSF10B-202ENST00000347739 FAT2Q9NYQ8 4349 aa13.8□□□□□ -0.2
TNFRSF10B-202ENST00000347739 PKD1P98161 4303 aa13.79□□□□□ -0.2
TNFRSF10B-202ENST00000347739 LCE6AA0A183 80 aa13.78□□□□□ -0.2
TNFRSF10B-202ENST00000347739 Q6ZSA8 131 aa13.78□□□□□ -0.2
TNFRSF10B-202ENST00000347739 A0A1W2PNM2 257 aa13.78□□□□□ -0.2
TNFRSF10B-202ENST00000347739 Q8NBF4 154 aa13.77□□□□□ -0.21
TNFRSF10B-202ENST00000347739 FAM30AQ9NZY2 134 aa13.77□□□□□ -0.21
TNFRSF10B-202ENST00000347739 SACSQ9NZJ4 4579 aa13.76□□□□□ -0.21
TNFRSF10B-202ENST00000347739 SPRR4Q96PI1 79 aa13.76□□□□□ -0.21
TNFRSF10B-202ENST00000347739 CIRBP-AS1Q8TBR5 109 aa13.74□□□□□ -0.21
TNFRSF10B-202ENST00000347739 KRTAP10-1P60331 282 aa13.73□□□□□ -0.21
TNFRSF10B-202ENST00000347739 IGFL1Q6UW32 110 aa13.73□□□□□ -0.21
TNFRSF10B-202ENST00000347739 ZNF861PO60384 105 aa13.72□□□□□ -0.21
TNFRSF10B-202ENST00000347739 CXCL6P80162 114 aa13.72□□□□□ -0.21
TNFRSF10B-202ENST00000347739 SRRM2Q9UQ35 2752 aaKnown RBP13.71□□□□□ -0.21
TNFRSF10B-202ENST00000347739 HAMPP81172 84 aa13.7□□□□□ -0.22
TNFRSF10B-202ENST00000347739 FAM236AA0A1B0GUQ0 79 aa13.7□□□□□ -0.22
TNFRSF10B-202ENST00000347739 FAM236BA0A1B0GV22 79 aa13.7□□□□□ -0.22
TNFRSF10B-202ENST00000347739 ZNF706Q9Y5V0 76 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF10B-202ENST00000347739 CRYGAP11844 174 aa13.69□□□□□ -0.22
TNFRSF10B-202ENST00000347739 LINC00483Q53H64 154 aa13.69□□□□□ -0.22
TNFRSF10B-202ENST00000347739 SCXQ7RTU7 201 aa13.69□□□□□ -0.22
TNFRSF10B-202ENST00000347739 LINC00336Q6ZUF6 198 aa13.68□□□□□ -0.22
TNFRSF10B-202ENST00000347739 NREPQ16612 68 aa13.67□□□□□ -0.22
TNFRSF10B-202ENST00000347739 HIST1H4AP62805 103 aaKnown RBP13.67□□□□□ -0.22
TNFRSF10B-202ENST00000347739 ANAPC13Q9BS18 74 aa13.67□□□□□ -0.22
TNFRSF10B-202ENST00000347739 IGLV7-43P04211 117 aa13.65□□□□□ -0.22
TNFRSF10B-202ENST00000347739 A0A087WVE0 104 aa13.63□□□□□ -0.23
TNFRSF10B-202ENST00000347739 A0A0G2JQZ4 141 aa13.61□□□□□ -0.23
TNFRSF10B-202ENST00000347739 RPL37AP61513 92 aaKnown RBP13.57□□□□□ -0.24
TNFRSF10B-202ENST00000347739 BPY2O14599 106 aa13.56□□□□□ -0.24
TNFRSF10B-202ENST00000347739 ATOX1O00244 68 aa13.53□□□□□ -0.24
TNFRSF10B-202ENST00000347739 IGLV9-49A0A0B4J1Y8 123 aa13.52□□□□□ -0.25
TNFRSF10B-202ENST00000347739 A0A087WSZ3 146 aa13.51□□□□□ -0.25
TNFRSF10B-202ENST00000347739 A0A1B0GVY2 172 aa13.51□□□□□ -0.25
TNFRSF10B-202ENST00000347739 C9orf153Q5TBE3 101 aa13.5□□□□□ -0.25
TNFRSF10B-202ENST00000347739 LRP1BQ9NZR2 4599 aa13.47□□□□□ -0.25
TNFRSF10B-202ENST00000347739 IGKV4-1P06312 121 aa13.47□□□□□ -0.25
TNFRSF10B-202ENST00000347739 RYR2Q92736 4967 aa13.46□□□□□ -0.25
TNFRSF10B-202ENST00000347739 ANAPC11Q9NYG5 84 aa13.44□□□□□ -0.26
TNFRSF10B-202ENST00000347739 MOBPQ13875 183 aa13.44□□□□□ -0.26
TNFRSF10B-202ENST00000347739 PKHD1P08F94 4074 aa13.43□□□□□ -0.26
TNFRSF10B-202ENST00000347739 Q8N9L7 120 aa13.42□□□□□ -0.26
TNFRSF10B-202ENST00000347739 DSCR10P59022 87 aa13.41□□□□□ -0.26
TNFRSF10B-202ENST00000347739 CCDC179H3BU77 68 aa13.37□□□□□ -0.27
TNFRSF10B-202ENST00000347739 KMT2CQ8NEZ4 4911 aaKnown RBP13.37□□□□□ -0.27
TNFRSF10B-202ENST00000347739 SERP2Q8N6R1 65 aa13.36□□□□□ -0.27
TNFRSF10B-202ENST00000347739 COX7CP15954 63 aa13.36□□□□□ -0.27
TNFRSF10B-202ENST00000347739 LINC00472Q9H8W2 130 aa13.36□□□□□ -0.27
TNFRSF10B-202ENST00000347739 UQCRQO14949 82 aa13.34□□□□□ -0.27
TNFRSF10B-202ENST00000347739 DYNC1H1Q14204 4646 aaKnown RBP13.33□□□□□ -0.27
TNFRSF10B-202ENST00000347739 K7EQZ3 153 aa13.33□□□□□ -0.28
TNFRSF10B-202ENST00000347739 FAM229BQ4G0N7 80 aa13.32□□□□□ -0.28
TNFRSF10B-202ENST00000347739 SSBP3-AS1Q7Z2R9 100 aa13.32□□□□□ -0.28
TNFRSF10B-202ENST00000347739 SMIM20Q8N5G0 67 aa13.32□□□□□ -0.28
TNFRSF10B-202ENST00000347739 SS18L2Q9UHA2 77 aa13.32□□□□□ -0.28
TNFRSF10B-202ENST00000347739 DEFB116Q30KQ4 102 aa13.3□□□□□ -0.28
TNFRSF10B-202ENST00000347739 VPS13BQ7Z7G8 4022 aa13.3□□□□□ -0.28
TNFRSF10B-202ENST00000347739 HRCT1Q6UXD1 115 aa13.28□□□□□ -0.28
TNFRSF10B-202ENST00000347739 CD164Q04900 197 aa13.27□□□□□ -0.28
TNFRSF10B-202ENST00000347739 J3KT08 172 aa13.27□□□□□ -0.29
TNFRSF10B-202ENST00000347739 TRAV7A0A075B6U4 112 aa13.26□□□□□ -0.29
TNFRSF10B-202ENST00000347739 KRTAP1-4P0C5Y4 121 aa13.26□□□□□ -0.29
TNFRSF10B-202ENST00000347739 A0A087X002 238 aa13.25□□□□□ -0.29
TNFRSF10B-202ENST00000347739 Q96NJ1 140 aa13.25□□□□□ -0.29
TNFRSF10B-202ENST00000347739 A8MWP4 228 aa13.24□□□□□ -0.29
TNFRSF10B-202ENST00000347739 KRTAP13-2Q52LG2 175 aa13.22□□□□□ -0.29
TNFRSF10B-202ENST00000347739 SPINK6Q6UWN8 80 aa13.22□□□□□ -0.29
TNFRSF10B-202ENST00000347739 PRR15Q8IV56 129 aa13.2□□□□□ -0.3
TNFRSF10B-202ENST00000347739 HCG22E2RYF7 251 aa13.19□□□□□ -0.3
TNFRSF10B-202ENST00000347739 APOBP04114 4563 aaKnown RBP13.19□□□□□ -0.3
TNFRSF10B-202ENST00000347739 SMR3BP02814 79 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF10B-202ENST00000347739 OCR1Q9BZK8 76 aa13.16□□□□□ -0.3
TNFRSF10B-202ENST00000347739 NDUFB1O75438 58 aa13.13□□□□□ -0.31
TNFRSF10B-202ENST00000347739 PLA2G1BP04054 148 aaKnown RBP13.13□□□□□ -0.31
TNFRSF10B-202ENST00000347739 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF10B-202ENST00000347739 ASB16-AS1Q495Z4 193 aa13.12□□□□□ -0.31
TNFRSF10B-202ENST00000347739 KRTAP29-1A8MX34 341 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF10B-202ENST00000347739 Q5XG85 94 aa13.08□□□□□ -0.32
TNFRSF10B-202ENST00000347739 WFDC13Q8IUB5 93 aa13.06□□□□□ -0.32
TNFRSF10B-202ENST00000347739 CASC2Q6XLA1 102 aa13.05□□□□□ -0.32
TNFRSF10B-202ENST00000347739 C20orf197Q8N268 126 aa13.05□□□□□ -0.32
TNFRSF10B-202ENST00000347739 RYR3Q15413 4870 aa13.04□□□□□ -0.32
TNFRSF10B-202ENST00000347739 MMP24-AS1A0A0U1RRL7 71 aa13.04□□□□□ -0.32
TNFRSF10B-202ENST00000347739 TYMSOSQ8TAI1 123 aa13.03□□□□□ -0.32
TNFRSF10B-202ENST00000347739 A0A1B0GVX0 72 aa13.02□□□□□ -0.32
TNFRSF10B-202ENST00000347739 CDK2AP2O75956 126 aa13.02□□□□□ -0.32
TNFRSF10B-202ENST00000347739 CYSTM1Q9H1C7 97 aa13.02□□□□□ -0.32
TNFRSF10B-202ENST00000347739 KLKP1Q107X0 134 aa13.02□□□□□ -0.33
TNFRSF10B-202ENST00000347739 LIMD2Q9BT23 127 aa12.99□□□□□ -0.33
TNFRSF10B-202ENST00000347739 FAT1Q14517 4588 aa12.99□□□□□ -0.33
TNFRSF10B-202ENST00000347739 C8orf17Q9NRJ1 99 aa12.98□□□□□ -0.33
TNFRSF10B-202ENST00000347739 SVIPQ8NHG7 77 aa12.97□□□□□ -0.33
TNFRSF10B-202ENST00000347739 TMEM254Q8TBM7 123 aa12.97□□□□□ -0.33
TNFRSF10B-202ENST00000347739 hDV103S1A0JD37 113 aa12.96□□□□□ -0.33
TNFRSF10B-202ENST00000347739 IGHV6-1A0A0B4J1U7 121 aa12.96□□□□□ -0.34
TNFRSF10B-202ENST00000347739 C4orf48Q5BLP8 95 aa12.95□□□□□ -0.34
TNFRSF10B-202ENST00000347739 PRR26Q8N8Z3 221 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms