RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
MS4A4A-202ENST00000343968 COX7BP24311 80 aa8.59□□□□□ -1.03
MS4A4A-202ENST00000343968 UBE2BP63146 152 aa8.59□□□□□ -1.03
MS4A4A-202ENST00000343968 KRTAP11-1Q8IUC1 163 aa8.59□□□□□ -1.03
MS4A4A-202ENST00000343968 SMIM20Q8N5G0 67 aa8.59□□□□□ -1.03
MS4A4A-202ENST00000343968 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
MS4A4A-202ENST00000343968 DYNC1H1Q14204 4646 aaKnown RBP8.58□□□□□ -1.04
MS4A4A-202ENST00000343968 TMEM258P61165 79 aa8.58□□□□□ -1.04
MS4A4A-202ENST00000343968 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
MS4A4A-202ENST00000343968 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
MS4A4A-202ENST00000343968 PKHD1P08F94 4074 aa8.57□□□□□ -1.04
MS4A4A-202ENST00000343968 CXCL6P80162 114 aa8.57□□□□□ -1.04
MS4A4A-202ENST00000343968 LAMTOR3Q9UHA4 124 aa8.57□□□□□ -1.04
MS4A4A-202ENST00000343968 Q6ZQY7 126 aa8.56□□□□□ -1.04
MS4A4A-202ENST00000343968 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
MS4A4A-202ENST00000343968 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
MS4A4A-202ENST00000343968 ETDCA0A1B0GVM5 59 aa8.56□□□□□ -1.04
MS4A4A-202ENST00000343968 Q6ZRX8 168 aa8.56□□□□□ -1.04
MS4A4A-202ENST00000343968 H0Y9J4 135 aa8.55□□□□□ -1.04
MS4A4A-202ENST00000343968 A0A1B0GW54 56 aa8.53□□□□□ -1.04
MS4A4A-202ENST00000343968 J3KT08 172 aa8.53□□□□□ -1.04
MS4A4A-202ENST00000343968 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
MS4A4A-202ENST00000343968 A0A087WVE0 104 aa8.52□□□□□ -1.05
MS4A4A-202ENST00000343968 Q6ZVQ6 151 aa8.51□□□□□ -1.05
MS4A4A-202ENST00000343968 FAM19A1Q7Z5A9 133 aa8.51□□□□□ -1.05
MS4A4A-202ENST00000343968 Q9BRP9 147 aa8.51□□□□□ -1.05
MS4A4A-202ENST00000343968 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
MS4A4A-202ENST00000343968 KRTAP13-1Q8IUC0 172 aa8.5□□□□□ -1.05
MS4A4A-202ENST00000343968 LINC01547P58512 204 aaPredicted RBP8.49□□□□□ -1.05
MS4A4A-202ENST00000343968 TRAV7A0A075B6U4 112 aa8.49□□□□□ -1.05
MS4A4A-202ENST00000343968 APOBP04114 4563 aaKnown RBP8.48□□□□□ -1.05
MS4A4A-202ENST00000343968 PRLHP81277 87 aa8.46□□□□□ -1.05
MS4A4A-202ENST00000343968 UBE2AP49459 152 aa8.46□□□□□ -1.06
MS4A4A-202ENST00000343968 HAMPP81172 84 aa8.45□□□□□ -1.06
MS4A4A-202ENST00000343968 C1orf137Q5JT78 98 aa8.45□□□□□ -1.06
MS4A4A-202ENST00000343968 ZNF861PO60384 105 aa8.43□□□□□ -1.06
MS4A4A-202ENST00000343968 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
MS4A4A-202ENST00000343968 IGLV5-48A0A075B6I7 105 aa8.43□□□□□ -1.06
MS4A4A-202ENST00000343968 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
MS4A4A-202ENST00000343968 KLKP1Q107X0 134 aa8.41□□□□□ -1.06
MS4A4A-202ENST00000343968 HIGD2AQ9BW72 106 aa8.41□□□□□ -1.06
MS4A4A-202ENST00000343968 NDUFC1O43677 76 aa8.4□□□□□ -1.06
MS4A4A-202ENST00000343968 CDK2AP2O75956 126 aa8.4□□□□□ -1.07
MS4A4A-202ENST00000343968 VPS13BQ7Z7G8 4022 aa8.39□□□□□ -1.07
MS4A4A-202ENST00000343968 Q8N377 158 aa8.39□□□□□ -1.07
MS4A4A-202ENST00000343968 SPRR1BP22528 89 aa8.38□□□□□ -1.07
MS4A4A-202ENST00000343968 ST20-AS1Q8NBB2 130 aa8.38□□□□□ -1.07
MS4A4A-202ENST00000343968 CYSTM1Q9H1C7 97 aa8.37□□□□□ -1.07
MS4A4A-202ENST00000343968 ATP5EP56381 51 aaPredicted RBP8.36□□□□□ -1.07
MS4A4A-202ENST00000343968 RPL37AP61513 92 aaKnown RBP8.35□□□□□ -1.07
MS4A4A-202ENST00000343968 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
MS4A4A-202ENST00000343968 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
MS4A4A-202ENST00000343968 NREPQ16612 68 aa8.34□□□□□ -1.08
MS4A4A-202ENST00000343968 DEFB105AQ8NG35 78 aa8.34□□□□□ -1.08
MS4A4A-202ENST00000343968 SPRR4Q96PI1 79 aa8.34□□□□□ -1.08
MS4A4A-202ENST00000343968 FAM236DA0A1B0GTK5 79 aa8.33□□□□□ -1.08
MS4A4A-202ENST00000343968 FAM236CP0DP71 79 aa8.33□□□□□ -1.08
MS4A4A-202ENST00000343968 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
MS4A4A-202ENST00000343968 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
MS4A4A-202ENST00000343968 KRTAP10-4P60372 401 aaPredicted RBP8.32□□□□□ -1.08
MS4A4A-202ENST00000343968 SMIM29Q86T20 159 aa8.32□□□□□ -1.08
MS4A4A-202ENST00000343968 H7BZZ5 65 aa8.31□□□□□ -1.08
MS4A4A-202ENST00000343968 HSPG2P98160 4391 aa8.31□□□□□ -1.08
MS4A4A-202ENST00000343968 SERP1Q9Y6X1 66 aa8.3□□□□□ -1.08
MS4A4A-202ENST00000343968 RYR1P21817 5038 aa8.29□□□□□ -1.08
MS4A4A-202ENST00000343968 BPY2O14599 106 aa8.29□□□□□ -1.08
MS4A4A-202ENST00000343968 IGKV4-1P06312 121 aa8.29□□□□□ -1.08
MS4A4A-202ENST00000343968 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
MS4A4A-202ENST00000343968 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
MS4A4A-202ENST00000343968 FAT1Q14517 4588 aa8.29□□□□□ -1.08
MS4A4A-202ENST00000343968 Q8NBF4 154 aa8.28□□□□□ -1.08
MS4A4A-202ENST00000343968 IGLV8-61A0A075B6I0 122 aa8.27□□□□□ -1.08
MS4A4A-202ENST00000343968 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
MS4A4A-202ENST00000343968 PLA2G1BP04054 148 aaKnown RBP8.25□□□□□ -1.09
MS4A4A-202ENST00000343968 OCR1Q9BZK8 76 aa8.24□□□□□ -1.09
MS4A4A-202ENST00000343968 F8WEM9 126 aa8.24□□□□□ -1.09
MS4A4A-202ENST00000343968 C5orf47Q569G3 176 aa8.24□□□□□ -1.09
MS4A4A-202ENST00000343968 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
MS4A4A-202ENST00000343968 FAM229BQ4G0N7 80 aa8.23□□□□□ -1.09
MS4A4A-202ENST00000343968 TMEM254Q8TBM7 123 aa8.23□□□□□ -1.09
MS4A4A-202ENST00000343968 SRRM2Q9UQ35 2752 aaKnown RBP8.22□□□□□ -1.09
MS4A4A-202ENST00000343968 A0A1W2PNM2 257 aa8.22□□□□□ -1.09
MS4A4A-202ENST00000343968 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
MS4A4A-202ENST00000343968 OXTP01178 125 aa8.2□□□□□ -1.1
MS4A4A-202ENST00000343968 Q5VSD8 79 aa8.2□□□□□ -1.1
MS4A4A-202ENST00000343968 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
MS4A4A-202ENST00000343968 Q8N1X5 172 aa8.19□□□□□ -1.1
MS4A4A-202ENST00000343968 ANAPC11Q9NYG5 84 aa8.19□□□□□ -1.1
MS4A4A-202ENST00000343968 SMIM26A0A096LP01 95 aa8.17□□□□□ -1.1
MS4A4A-202ENST00000343968 IGFL1Q6UW32 110 aa8.17□□□□□ -1.1
MS4A4A-202ENST00000343968 SNURFQ9Y675 71 aa8.17□□□□□ -1.1
MS4A4A-202ENST00000343968 KIAA1109Q2LD37 5005 aa8.16□□□□□ -1.1
MS4A4A-202ENST00000343968 KRTAP17-1Q9BYP8 105 aa8.16□□□□□ -1.1
MS4A4A-202ENST00000343968 IGLV9-49A0A0B4J1Y8 123 aa8.15□□□□□ -1.1
MS4A4A-202ENST00000343968 Q5XG85 94 aa8.15□□□□□ -1.1
MS4A4A-202ENST00000343968 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.1
MS4A4A-202ENST00000343968 A0A087X002 238 aa8.14□□□□□ -1.11
MS4A4A-202ENST00000343968 MOBPQ13875 183 aa8.14□□□□□ -1.11
MS4A4A-202ENST00000343968 KRTAP13-2Q52LG2 175 aa8.14□□□□□ -1.11
MS4A4A-202ENST00000343968 Q8N9L7 120 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms